Genus | Begomovirus |
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NCBI Assembly | GCF_000838385.1 |
Release date | 2015/2/12 |
Submitter | Jiang,H., Hou,Y.-M., Guzman,P., Gilbertson,R.L. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_620745.1 |
---|---|
Location | 218-973 |
Gene Name | av1 |
Protein Name | AV1 protein |
Coding Region | ATGCCTAAGCGCGATCTACCCTGGCGCTCGATCGCGGGAACTTCGAAGGTGAGCCGCAATGCCAATTATTCCCCTCGTGGAGGAAGTGGGCCTCGAATTAACAAGGCCGCTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACGCTGAGAACGCCTGACGTTCCAAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCCTATGAACAGCGCCACGATATTTCACATACAGGTAAGGTTATGTGCATATCCGACGTGACACGTGGTAATGGTATCACTCACCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTGTACATTCTCGGTAAGATCTGGATGGATGAGAACATCAAGCTGAAGAACCACACGAATAGTGTTATGTTCTGGTTGGTCAGGGATCGTAGACCGTATGGCACTCCCATGGATTTCGGTCAAGTGTTCAACATGTTTGACAACGAGCCCAGCACTGCTACGGTGAAGAACGATCTACGCGATCGATTCCAGGTCATGCACAAATTCTATGGGAAGGTGACAGGTGGACAGTATGCCAGCAACGAGCAGGCGATAGTCAAGCGCTTCTGGAAGGTCAACAATCATGTGGTCTACAATCATCAAGAGGCTGGCAAGTACGAGAATCATACGGAGAACGCTTTGTTATTGTACATGGCATGTACGCATGCCTCTAACCCTGTATATGCAACGCTTAAGATCCGGATCTACTTCTATGATTCGATCATGAATTAA |
Protein Sequence | MPKRDLPWRSIAGTSKVSRNANYSPRGGSGPRINKAAEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHTGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession | NP_620746.1 |
---|---|
Location | 970-1368 |
Gene Name | ac3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTCACGCACAGGGGAATTCATCACTGTACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAAGATGTACAAAGTGGAGGATCTACCGTATACGAGAACCAGGGTTTACCACGTTCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGATAGCTTCTGGGTCGACCTATTTAGCTAGGTTTAGACATTTAGTTAATATGTATTTAGATCAGTTAGGCGTTATTTCCATTAACAATGTAATCAGAGCTGTTCGTTTCGCAACAGACAGGTCGTATGTTAGTTATGTACTGGAAAATCATTCAATAAAATTCAAACTTTATTAA |
Protein Sequence | MDSRTGEFITVPQAENGVYIWEIENPLYFKMYKVEDLPYTRTRVYHVQIRFNHNLRRALHLHKAYLNFQVWTTSMIASGSTYLARFRHLVNMYLDQLGVISINNVIRAVRFATDRSYVSYVLENHSIKFKLY |
NCBI Accession | NP_620747.1 |
---|---|
Location | 1115-1504 |
Gene Name | ac2 |
Protein Name | AC2 protein |
Coding Region | ATGCGATCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCGCACAGGCAAGCCAAGAAAAGGGCCATCAGGAGGAGGCGGATTGATTTACGGTGCGGGTGCTCCATATACTTCCACATAGGCTGCACGGGGCATGGATTCACGCACAGGGGAATTCATCACTGTACCTCAGGCGGAGAATGGCGTGTATATCTGGGAGATAGAAAATCCCCTCTATTTCAAGATGTACAAAGTGGAGGATCTACCGTATACGAGAACCAGGGTTTACCACGTTCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGATAGCTTCTGGGTCGACCTATTTAGCTAG |
Protein Sequence | MRSSSPSHPPSIKTAHRQAKKRAIRRRRIDLRCGCSIYFHIGCTGHGFTHRGIHHCTSGGEWRVYLGDRKSPLFQDVQSGGSTVYENQGLPRSDTVQPQPEESVASPQSLPELPSLDDIDDSFWVDLFS |
NCBI Accession | NP_620748.1 |
---|---|
Location | 1416-2501 |
Gene Name | ac1 |
Protein Name | AC1 protein |
Coding Region | ATGCCATCGGTTAAACGTTTCAAAGTCTCAGCCAAAAACTATTTCCTCACATATCCCCAGTGCTCTCTTAGCAAAGAAGAAGCACTTTCCCAATTACAAACCCTAAAAACGCCAGTTAACAAGAAATACATCAAGATTTGCAGAGAGTTACATGAGAATGGGGAGCCTCATCTCCACGTTCTCATCCAATTCGAAGGGAAGTACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCCGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACAGTTGAGTGGGGAGAATTCCAGATCGACGGCAGATCAGCTAGAGGAGGTCAGCAATCTGCTAACGACTCATATGCCAAGGCGTTGAATGCAGGATCTGTTCAATCTGCCATGGCGGTTTTAAAGGAAGAGCAGCCAAAAGATTTTGTCCTGCATAATCATAACATCCGCTCCAACCTAGAGAGAATATTCGCAAAGGCTCCGGAACGGTGGGTTCCTCCGTTTCAACTCTCTTCGTTCACTAACGTTCCAGACGAGATGCAAGAGTGGGCGGATGATTATTTTGGAAGAGGTTCCGCTGCGCGGCCGGAAAGACCTATTAGTATCATCGTGGAAGGTGATTCGAGGACAGGGAAGACGATGTGGGCTAGGGCATTAGGCCCACATAATTACCTAAGTGGTCATCTGGACTTCAACCCAAAGGTCTACTCGAACGAAGTGGAGTATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGTTAAAGCACTGGAAGGAACTTCTGGGGGCCCAGAAGGACTGGCAATCCAATTGCAAGTACGGTAAGCCAGTTCAAATTAAAGGAGGGATCCCAGCAATCGTGCTTTGCAATCCTGGTGAGGGTGCCAGCTATAAAGATTTCCTCAACAAAGAGGAAAACGCATCACTGAGAAATTGGACCATAAAGAATGCGATCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCGCACAGGCAAGCCAAGAAAAGGGCCATCAGGAGGAGGCGGATTGA |
Protein Sequence | MPSVKRFKVSAKNYFLTYPQCSLSKEEALSQLQTLKTPVNKKYIKICRELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTVEWGEFQIDGRSARGGQQSANDSYAKALNAGSVQSAMAVLKEEQPKDFVLHNHNIRSNLERIFAKAPERWVPPFQLSSFTNVPDEMQEWADDYFGRGSAARPERPISIIVEGDSRTGKTMWARALGPHNYLSGHLDFNPKVYSNEVEYNVIDDVAPHYLKLKHWKELLGAQKDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKDFLNKEENASLRNWTIKNAIFITLTSALYQDSAQASQEKGHQEEAD |
NCBI Accession | NP_620749.1 |
---|---|
Location | 2087-2350 |
Gene Name | ac4 |
Protein Name | AC4 protein |
Coding Region | ATGAGAATGGGGAGCCTCATCTCCACGTTCTCATCCAATTCGAAGGGAAGTACCAGTGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCCGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACAGTTGAGTGGGGAGAATTCCAGATCGACGGCAGATCAGCTAGAGGAGGTCAGCAATCTGCTAACGACTCATATGCCAAGGCGTTGA |
Protein Sequence | MRMGSLISTFSSNSKGSTSARITDSSIWSPQPGQHISIRTYRELNPAPTSSPTSTRTEIQLSGENSRSTADQLEEVSNLLTTHMPRR |
NCBI Accession | NP_620750.1 |
---|---|
Location | 457-1227 |
Gene Name | bv1 |
Protein Name | BV1 protein |
Coding Region | ATGTATCCTTTTAGGTCTAAGCGTGGTGCCTCATTTGTTGCACGTCGTTCTTATTCACGTAATAATTTGTTTAAGCGATCAACCATCTCCAAACGAGATGATGGGAGACGTCGATCTGTTAATGCAACTAAACCCAATGACGAGCCCAAGATGATAGCCCAACGCATGCACGAGAATCAGTTTGGGCCAGATTTTGTAATGGCCCATAATGCAGCCTTGGCAACTTTCATCAGCTTCCCTTGTTTGGGTAAGACTCAACCGAACCGAAGCAGGTCGTATATCAAGTTGAAACGGCTGCGTTTCAAAGGTACGGTGAAGATCGAACGTGTCATGTCTGATATGAACATGGATGGTTCTACTTCCAAGGTCGAAGGAGTTTTCTCACTCGTTGTCGTTGTGGATCGAAAACCCCATCTGGGTGCGTCCGGCAGTCTACATACGTTTGATGAACTATTTGGCGCTAGGATCCACAGCCATGGAAACCTCAGCATAACCCCTTCTTTGAAAGACCGGTTTTACATAAGACACGTGTTCAAACGTGTATTGTCTGTGGAGAAGGATAGTATGATGGTTGATGTTGAAGGGTCCACAGCTCTCTCTAACAGGCGTTTCAATTGTTGGTCCACGTTTAAGGATTTGGATCGTGATTCATGTAACGGCGTTTATGGTAACATCAGCAAGAACGCCCTGTTAGTCTACTATTGTTGGATGTCAGATACTATGTCTAGGGCGTCAAGCTTTGTATCGTTTGATCTCGATTATATTGGATGA |
Protein Sequence | MYPFRSKRGASFVARRSYSRNNLFKRSTISKRDDGRRRSVNATKPNDEPKMIAQRMHENQFGPDFVMAHNAALATFISFPCLGKTQPNRSRSYIKLKRLRFKGTVKIERVMSDMNMDGSTSKVEGVFSLVVVVDRKPHLGASGSLHTFDELFGARIHSHGNLSITPSLKDRFYIRHVFKRVLSVEKDSMMVDVEGSTALSNRRFNCWSTFKDLDRDSCNGVYGNISKNALLVYYCWMSDTMSRASSFVSFDLDYIG |
NCBI Accession | NP_620751.1 |
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Location | 1246-2127 |
Gene Name | bc1 |
Protein Name | BC1 protein |
Coding Region | ATGGAATCTCAGCTAGCATTTCCTCCTAACGCTTTCAATTACATAGAGTCCCACAGGGACGAATATCAGCTTTCACATGATCTGACTGAGATCGTTCTGCAATTTCCGTCAACGGCGTCACAATTCACAGCAAGACTCAGTCGGAGTTGTATGAAGATCGACCATTGCGTCATAGAATACAGGCAGCAGGTTCCGATTAACGCCACCGGGACGGTAATTGTGGAGATACACGACAAGAGAATGACGGAAAATGAATCGCTACAGGCGTCATGGACTTTTCCGATCAGATGCAACATAGATCTCCACTACTTCTCAGCATCCTTCTTTTCGCTCAAAGACCCAATTCCATGGAAACTCTATTACAGAGTTTGCGATACGAATGTTCATCAGAGGACTCACTTCGCGAAATTCAAAGGGAAACTGAAATTGTCGACGGCGAAACATTCAGTGGATATTCCGTTCAGGGCACCGACGGTCAAAATCCTATCCAAACAGTTCACAGACAAAGATGTCGACTTTTCCCACGTCGACTACGGAAGATGGGAAAGGAAGCCCATCAGATGTGCATCCATGTCAAGACTTGGGCTCCGAGGCCCAATTGAAATAAAGCCTGGTGAGTCTTGGGCTTCCAGGAGTGCATTGGGAACGGGTCAATCAGATGCGGACTCAGAGGTCGAGAACGAGCTGCACCCATACAGACATCTAAGTAGGCTAGGGACCAACATTTTAGACCCTGGAGAGTCTGCTTCAATAGTGGGAGCCCGGAGAGCGGAATCAAACATAACAATGTCCATGGGCCAATTAAACGAACTAGTAAGGACTACGGTCCAAGAATGTATTAATAGTAATTATAAGGCTTCTCAGCCCAAAACGTTGCAATAA |
Protein Sequence | MESQLAFPPNAFNYIESHRDEYQLSHDLTEIVLQFPSTASQFTARLSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTENESLQASWTFPIRCNIDLHYFSASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDVDFSHVDYGRWERKPIRCASMSRLGLRGPIEIKPGESWASRSALGTGQSDADSEVENELHPYRHLSRLGTNILDPGESASIVGARRAESNITMSMGQLNELVRTTVQECINSNYKASQPKTLQ |
1 |
Brown JK, et al. Phytopathology. 2000 May;90(5):546-52. doi: 10.1094/PHYTO.2000.90.5.546. PMID: 18944562 |
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2 |
A New Begomovirus Causes Tomato Leaf Curl Disease in Baja California Sur, Mexico. Holguín-Peña RJ, et al. Plant Dis. 2005 Mar;89(3):341. doi: 10.1094/PD-89-0341A. PMID: 30795368 |
3 |
Mauricio-Castillo JA, et al. Arch Virol. 2014 Sep;159(9):2283-94. doi: 10.1007/s00705-014-2073-8. Epub 2014 Apr 16. PMID: 24737005 |
4 |
De La Torre-Almaraz R, et al. Plant Dis. 2006 Mar;90(3):378. doi: 10.1094/PD-90-0378B. PMID: 30786574 |
5 |
Collins AM, et al. Virus Genes. 2009 Dec;39(3):387-95. doi: 10.1007/s11262-009-0401-y. Epub 2009 Sep 20. PMID: 19768650 |