Opuntia virus 1
Basic Information
| Genus |
Opunvirus
|
| NCBI Assembly |
GCF_018587595.1 |
| Isolate |
USA |
| Release date |
2021/6/1 |
| Submitter |
Fontenele,R.S., Schmidlin,K., Majure,L., Salywon,A., Kraberger,S., Wojciechowski,M., Cobb,I., Varsani,A. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAATATTACCTGATGGCCGCGCCCCCTTTAAAGTGGGCCCCCTGGACAGATGGCAGATGTTGAGTGGAAGTGCACTGTTATGGACCGGTGGCATTTTTGTAAATATGTGGAACGTTAGATAATGCGGTACGCATTATCGGCAACTTTAACCTTAATTTAAATTAAAGTTAAAGATAGTGGATATGGGAATGATTATGTCTTCTTTAAATTGAATTGCTTGGGACAGAGTGTTTCATTGATTGAGATGGATAGGACTGATAGGGGTCAGTTGACTAGACTTGTGTTCAGGTACGGATTTGCTGTGGTGTTGAAGGAGCTGAATACGGAGGCCCTGAATAGTCCGTATTTGTGGGAGCAATTTTGGCATGCAGTCAGGTACACCGAGGAAACGATATGCCGGGATTTTGTCTCCTTCAGGAGGCATAAGGAAGAGTGCGAGAAGGAGGTTGGTGTTTTCTACACCAACAAAAAAGAGTGGCCAGGGGAGCTTGACCCCACGGTTAAGGAGACAACCGCAGCTGCAGACGGTTCACCGGCAGCAGGTGACGGTTGATTGTGATGGGAAGTGTCCGCATGGTTCAATATTGTGCAAGATATTGAATGATATGTCTCTGGGTCAGGATGAGACCCAGAGACATAGTAATAAGGTGAATTTCACTTATGTTAGTATTAGAGGGGAGCTGGATCTGGCTGATGTTCATCAGGATTTGACTGCTTGGTATGGGCAGAAGCAGTATATTTTTTTGTGGTTATTTTTAGATAGGACAGTCAGAGGAGATACGTTTGATATAGGTGACTTTTTTAAGGGATCAATTACTGATCCCGAGCAGTGGTTTGTTAATTCTAATAATAGGGATAGATATATATTGTTGAAGAAGAGGAGGATTATGTTTCAGCTTCCTTGTAAGCAGAAGGATTCTGCGGGTGTTTTTAATTGTATTAGTAGTCATGATAGGTATAAGCCATTTGAGTTTAGGAAGAGGTTAATGTTTCAGAGTCATTGGGATAATACGGGGAAGTTAGTTAGGAATAGGTTGTTGTTGTTAGCGACTGTGGGTAAGGCTGTTGAGATTACTATGAACAGCCAGATGAGATTGTATTTCAATTCAGCATGATTAATAAAGGAGAAATTTTATATCATATTTTGTGTTTCTGATTTCATATACATATTTGGATACATCAAAGAAATAATATATTGCTCTTGCAATATTATTTATGCTTACAACACCTAAATTATTTAAGTAAAAAAATACATGGTGTTTAAATCTAGTCAAGAATGAACTCCCAGTCGCTGTAATCAGAGTAGTAAGTATCTCTGTCTGGATCCAGCATTTGTGTAAGCCTAGCTCTTTTCGGAGGTTGTGGTTTGCCTGGATCCGGATGCGGAATAACTGTCCTTGAGAATTGTCCCCTGTGAATAACAGTTTCATGTATAGGGGATTGGGGACCTTCCATATGAAGGTCCCAGTCTCTGCTTGAAATGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGGCCACAAGCTTTGGAGTAGAGGAATGTGCATTTGCATTCCAGGTGGAATGCAATTCTTCGTTCTCTTCTTCTTTTGTTCTTGGCATTCTTATGCTGGAGTCTGATGTCATGGACTGGGCAGTCAATGTACTTGTCTCTGTGGCATTGGACAGGATCAGAGCATGATTGAATGGGGTTGTTATAAATAGGTGTAGTTGGGGAAGGAGGAAGGGGTTTTATTTCAGTGGAGGGATCAGAAGAGTGGCTGGGTGATGAATATGAAATAGGCATTTTGGAGTGTCCACTCTTTCAATGCTCTATTTTCGTCCTTGTCCAGAAACTCTTTATAAGATGTTTCTGGTCCTGGATTGCAGAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTATTTACAGTTGCTTTGCCAGTCTCTTTGGGCCCCAATAAGTTCTTTCCAATGTTTTAGCTTTAGATAGTGCGGTGTGATGTCATCAATGACATTATACATCGCACTGTTGCTAAAACATTTACTGTTGAAATCTAGGTGCCCTGATAGATAATTATGGGCACCTAGTGATCTAGCCCACGCAGTTTTTCCGGTTCTGCTAGGACCTTCAACAATTAGACTTTTGGGTCTATGCCCTATGACATTATTAACAATTGGCCCCGCAGGGGAAGTAACATCAAACTCAAATGTCTCCCCTAGCCATTGTTCCATGTCATCTGTAATTTTAAAATGTGAAAAAATATTTTCAAATGGTTTAGGTGGAGGAGCAAATATTTTGTCCAAATTACTGTTAATGTTGTGAAACATTAACACGTAATGCTGGGGTTGTTCCTCTCTTATTATTCTCATTGCCTCGTCTTTGGATGTGGCATTGAGTGCTTTTGCATAAGAATCATTGGCAGATTGTTTACCTCCTCTTGCAGATCTGCCGTCTATTTGGAAAACTCCAAAATCCAATACATCTCCGTCTTTCTCCATATAAGTTTTGCAGTCGGAGGAGGACTTGGCGGATTGAATGTTTGGATGGAATTGAATGGAGGAATGGGGGTGTCGAAGATCGAAGAATCTATTATTTTGGCACTTGAATTTGGATTCGAATTGGATAAGCACATGGAGATGAGGTTCCCCATTTTGATGTAATTCTCGGCAGATTCGGATGAATTTAATGTTTGTTGGAGTGTGGAGGTTTTGAAGTTGGGAGAGTGCTTCTTCTTTGGAGAGGGAGCATTTGGGGAAAGTGAGGAAATAATTTTTGGAGTTAATTAAAAATTTGGGTCTTGTCATTTTGCAAGACTGACGTGTCAAAAAATAAAACGACTGCGTTTTGTTATTTGACACTACAGCCTTGTAAGTTGAGGACCCGATAGGTTTGCTCTCACAAAACTCTGAGGAACCAATATATTGGGTCCTTATTTATAGCGGCCATCAGAAA
Gene Information
|
NCBI Accession
|
YP_010087791.1
|
|
Location
|
245-553 |
|
Gene Name
|
mp |
|
Protein Name
|
putative movement protein |
|
Coding Region
|
ATGGATAGGACTGATAGGGGTCAGTTGACTAGACTTGTGTTCAGGTACGGATTTGCTGTGGTGTTGAAGGAGCTGAATACGGAGGCCCTGAATAGTCCGTATTTGTGGGAGCAATTTTGGCATGCAGTCAGGTACACCGAGGAAACGATATGCCGGGATTTTGTCTCCTTCAGGAGGCATAAGGAAGAGTGCGAGAAGGAGGTTGGTGTTTTCTACACCAACAAAAAAGAGTGGCCAGGGGAGCTTGACCCCACGGTTAAGGAGACAACCGCAGCTGCAGACGGTTCACCGGCAGCAGGTGACGGTTGA |
|
Protein Sequence
|
MDRTDRGQLTRLVFRYGFAVVLKELNTEALNSPYLWEQFWHAVRYTEETICRDFVSFRRHKEECEKEVGVFYTNKKEWPGELDPTVKETTAAADGSPAAGDG |
|
NCBI Accession
|
YP_010087792.1
|
|
Location
|
366-1115 |
|
Gene Name
|
cp |
|
Protein Name
|
capsid protein |
|
Coding Region
|
ATGCAGTCAGGTACACCGAGGAAACGATATGCCGGGATTTTGTCTCCTTCAGGAGGCATAAGGAAGAGTGCGAGAAGGAGGTTGGTGTTTTCTACACCAACAAAAAAGAGTGGCCAGGGGAGCTTGACCCCACGGTTAAGGAGACAACCGCAGCTGCAGACGGTTCACCGGCAGCAGGTGACGGTTGATTGTGATGGGAAGTGTCCGCATGGTTCAATATTGTGCAAGATATTGAATGATATGTCTCTGGGTCAGGATGAGACCCAGAGACATAGTAATAAGGTGAATTTCACTTATGTTAGTATTAGAGGGGAGCTGGATCTGGCTGATGTTCATCAGGATTTGACTGCTTGGTATGGGCAGAAGCAGTATATTTTTTTGTGGTTATTTTTAGATAGGACAGTCAGAGGAGATACGTTTGATATAGGTGACTTTTTTAAGGGATCAATTACTGATCCCGAGCAGTGGTTTGTTAATTCTAATAATAGGGATAGATATATATTGTTGAAGAAGAGGAGGATTATGTTTCAGCTTCCTTGTAAGCAGAAGGATTCTGCGGGTGTTTTTAATTGTATTAGTAGTCATGATAGGTATAAGCCATTTGAGTTTAGGAAGAGGTTAATGTTTCAGAGTCATTGGGATAATACGGGGAAGTTAGTTAGGAATAGGTTGTTGTTGTTAGCGACTGTGGGTAAGGCTGTTGAGATTACTATGAACAGCCAGATGAGATTGTATTTCAATTCAGCATGA |
|
Protein Sequence
|
MQSGTPRKRYAGILSPSGGIRKSARRRLVFSTPTKKSGQGSLTPRLRRQPQLQTVHRQQVTVDCDGKCPHGSILCKILNDMSLGQDETQRHSNKVNFTYVSIRGELDLADVHQDLTAWYGQKQYIFLWLFLDRTVRGDTFDIGDFFKGSITDPEQWFVNSNNRDRYILLKKRRIMFQLPCKQKDSAGVFNCISSHDRYKPFEFRKRLMFQSHWDNTGKLVRNRLLLLATVGKAVEITMNSQMRLYFNSA |
|
NCBI Accession
|
YP_010087793.1
|
|
Location
|
1116-1514 |
|
Gene Name
|
ren |
|
Protein Name
|
replication enhancer protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAACCCATCACTGCATTTCAAGCAGAGACTGGGACCTTCATATGGAAGGTCCCCAATCCCCTATACATGAAACTGTTATTCACAGGGGACAATTCTCAAGGACAGTTATTCCGCATCCGGATCCAGGCAAACCACAACCTCCGAAAAGAGCTAGGCTTACACAAATGCTGGATCCAGACAGAGATACTTACTACTCTGATTACAGCGACTGGGAGTTCATTCTTGACTAGATTTAAACACCATGTATTTTTTTACTTAAATAATTTAGGTGTTGTAAGCATAAATAATATTGCAAGAGCAATATATTATTTCTTTGATGTATCCAAATATGTATATGAAATCAGAAACACAAAATATGATATAAAATTTCTCCTTTATTAA |
|
Protein Sequence
|
MDSRTGEPITAFQAETGTFIWKVPNPLYMKLLFTGDNSQGQLFRIRIQANHNLRKELGLHKCWIQTEILTTLITATGSSFLTRFKHHVFFYLNNLGVVSINNIARAIYYFFDVSKYVYEIRNTKYDIKFLLY |
|
NCBI Accession
|
YP_010087794.1
|
|
Location
|
1267-1785 |
|
Gene Name
|
trap |
|
Protein Name
|
transactivator protein |
|
Coding Region
|
ATGCCTATTTCATATTCATCACCCAGCCACTCTTCTGATCCCTCCACTGAAATAAAACCCCTTCCTCCTTCCCCAACTACACCTATTTATAACAACCCCATTCAATCATGCTCTGATCCTGTCCAATGCCACAGAGACAAGTACATTGACTGCCCAGTCCATGACATCAGACTCCAGCATAAGAATGCCAAGAACAAAAGAAGAAGAGAACGAAGAATTGCATTCCACCTGGAATGCAAATGCACATTCCTCTACTCCAAAGCTTGTGGCCATGGATTCACGCACAGGGGAACCCATCACTGCATTTCAAGCAGAGACTGGGACCTTCATATGGAAGGTCCCCAATCCCCTATACATGAAACTGTTATTCACAGGGGACAATTCTCAAGGACAGTTATTCCGCATCCGGATCCAGGCAAACCACAACCTCCGAAAAGAGCTAGGCTTACACAAATGCTGGATCCAGACAGAGATACTTACTACTCTGATTACAGCGACTGGGAGTTCATTCTTGACTAG |
|
Protein Sequence
|
MPISYSSPSHSSDPSTEIKPLPPSPTTPIYNNPIQSCSDPVQCHRDKYIDCPVHDIRLQHKNAKNKRRRERRIAFHLECKCTFLYSKACGHGFTHRGTHHCISSRDWDLHMEGPQSPIHETVIHRGQFSRTVIPHPDPGKPQPPKRARLTQMLDPDRDTYYSDYSDWEFILD |
|
NCBI Accession
|
YP_010087795.1
|
|
Location
|
1748-2797 |
|
Gene Name
|
rep |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGACAAGACCCAAATTTTTAATTAACTCCAAAAATTATTTCCTCACTTTCCCCAAATGCTCCCTCTCCAAAGAAGAAGCACTCTCCCAACTTCAAAACCTCCACACTCCAACAAACATTAAATTCATCCGAATCTGCCGAGAATTACATCAAAATGGGGAACCTCATCTCCATGTGCTTATCCAATTCGAATCCAAATTCAAGTGCCAAAATAATAGATTCTTCGATCTTCGACACCCCCATTCCTCCATTCAATTCCATCCAAACATTCAATCCGCCAAGTCCTCCTCCGACTGCAAAACTTATATGGAGAAAGACGGAGATGTATTGGATTTTGGAGTTTTCCAAATAGACGGCAGATCTGCAAGAGGAGGTAAACAATCTGCCAATGATTCTTATGCAAAAGCACTCAATGCCACATCCAAAGACGAGGCAATGAGAATAATAAGAGAGGAACAACCCCAGCATTACGTGTTAATGTTTCACAACATTAACAGTAATTTGGACAAAATATTTGCTCCTCCACCTAAACCATTTGAAAATATTTTTTCACATTTTAAAATTACAGATGACATGGAACAATGGCTAGGGGAGACATTTGAGTTTGATGTTACTTCCCCTGCGGGGCCAATTGTTAATAATGTCATAGGGCATAGACCCAAAAGTCTAATTGTTGAAGGTCCTAGCAGAACCGGAAAAACTGCGTGGGCTAGATCACTAGGTGCCCATAATTATCTATCAGGGCACCTAGATTTCAACAGTAAATGTTTTAGCAACAGTGCGATGTATAATGTCATTGATGACATCACACCGCACTATCTAAAGCTAAAACATTGGAAAGAACTTATTGGGGCCCAAAGAGACTGGCAAAGCAACTGTAAATACGGCAAGCCAGTTCAAATTAAAGGAGGTATCCCATCAATCGTGCTCTGCAATCCAGGACCAGAAACATCTTATAAAGAGTTTCTGGACAAGGACGAAAATAGAGCATTGAAAGAGTGGACACTCCAAAATGCCTATTTCATATTCATCACCCAGCCACTCTTCTGA |
|
Protein Sequence
|
MTRPKFLINSKNYFLTFPKCSLSKEEALSQLQNLHTPTNIKFIRICRELHQNGEPHLHVLIQFESKFKCQNNRFFDLRHPHSSIQFHPNIQSAKSSSDCKTYMEKDGDVLDFGVFQIDGRSARGGKQSANDSYAKALNATSKDEAMRIIREEQPQHYVLMFHNINSNLDKIFAPPPKPFENIFSHFKITDDMEQWLGETFEFDVTSPAGPIVNNVIGHRPKSLIVEGPSRTGKTAWARSLGAHNYLSGHLDFNSKCFSNSAMYNVIDDITPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGPETSYKEFLDKDENRALKEWTLQNAYFIFITQPLF |
|
NCBI Accession
|
YP_010087796.1
|
|
Location
|
2446-2643 |
|
Gene Name
|
ac4 |
|
Protein Name
|
AC4 |
|
Coding Region
|
ATGGGGAACCTCATCTCCATGTGCTTATCCAATTCGAATCCAAATTCAAGTGCCAAAATAATAGATTCTTCGATCTTCGACACCCCCATTCCTCCATTCAATTCCATCCAAACATTCAATCCGCCAAGTCCTCCTCCGACTGCAAAACTTATATGGAGAAAGACGGAGATGTATTGGATTTTGGAGTTTTCCAAATAG |
|
Protein Sequence
|
MGNLISMCLSNSNPNSSAKIIDSSIFDTPIPPFNSIQTFNPPSPPPTAKLIWRKTEMYWILEFSK |