Paper mulberry leaf curl virus 1
Basic Information
Genomic Organization
JBrowse
Genome
ACCCCCCGCGTCAGGAGTGGGCCCCACTTGGGGCCCACGATGAGTGACAGCTCAAAAGGCGGAGACGAGCTGACCCTAATGTGGCCGACAAAAGAAAAAGCGGGAAAAGCAAAAGATAAAAACTCGTGACCGCTTTTTCTTTTGACCGGCGTGTCGAGGAAGTTCCTTCCTCGCGAAGGTGTCGGTGACCGACACTATAAATGGAACGTCGTCGTTTCAATATTGTTGTGAGATGTCAGATATATCAGAGGTAGAGTATTGTTTGTCTAGTTCCAGTCTCACAGGTTTTTTTATTTGTATATCGATATTTTTATTATTATTATTCTGCCAGTATGGATACGTGGCAGTGCAGATTAGGCGACTTGCCAGAAACATTGACCGGCTGCCTGCACATGCTGGCATGCAAGTTCCTCCAGAACATGGAGGAGAGGGCAGAAATGCATATGGCCCTCATTAATCCCGAGTACGGGATGCCTGAGGCCAAGAGTTACTATGAACACATGATTGCTAAACAGGAGATCCGTGATTTGCTTAGGTTAATTAGGAGATTAGGGAGAGTGAAGGACAAGAGTAGTGTTAATGGCGATTACAAGGTCTATGCAGAGGAGCTCAGGAATAGGACTGCTTCCAGGTTGGGGAAGAAGACAGAGGAGACGGGGCCCACCAAGGAAGAGCCGGTACCAGCGAAGTGTACCTGGTCTGAGTGGGCCAAGTCGTTGGGGCCGACGGTCAAAAAGGACAAGGAGGACCAGATACCGCAAGGTCCCGATTGGGTGTAAGGGCCCCTGTAAAACTTTAACTTATGATAATAAAGGTGTTATTGACCACACCGGTGGTTATATTGTTCATATATCGCGTATTGACCGTGGTGAAGAGTTTGTGGACCGTACTGGGAAACGTGTTAAAATTAAAGCGATTAGAATGATGGGTAAAATATATCTGGATGGTCAGTATAAGGCCAATCCTGGGGTGACAACTGTACGTTTGTATATTATTAGAGATGCTCGTCCTGGCAGTCAACAGCTTGCTTTTGATGCATTTATGGACATGAAAGATAAAGAACCCACAACGGCAATGATAAAAACAGATTACAGAGACCGTTTGAAAATATTAAAATATATAGATTTGGAAGTGGCAGGTGGCAAGGATTTTAGGGTGGATGAGCAGACTTTTGAATTATTTATGGATGGATTAAATCATGAAATTGTTTATAATCACAATGATCAAGGCACACTGGACAATATACTGAGTGGATCTCTTCATATTTATCAGACTTGTAGTAATCCTGATATGAAAGTTAATGTTAATGCGACTGTTCGTTTGTATATGTTTGATTCTCTACAGAATTGACGGTCAAGGAGACTGGGTAAAGGTATTCAAGGTGGACCCACATATTCACCCCCACACAGTCCCCCCCCTCCTGATAAGAAATCCGATACCAGTGGCCCAAGTGGTCCCCAGTCAGAACCGTACACACCAGAACAGAAGAAAAAGGTTAAAGGAGATGACCGAGAAGATAGATCAAGTCAACAATCATATACATCAGACTATTCGACATCTGGATCAACTAATAGAAGATCACCGTTTGAAGACCCAGAGTTAATAAAAATAAGAAATGAAATAATGGGGGATGCAGGATTTACTGTAAAGAATGTAGAATATTGGACACCGGATGTAAAAAAGAAGACAAAAAAGACCGTGTTGTAAAATATGACTTGTATTAATAAAATTTTTCATTTTCATATAAATAATATTCGATTACATTTGAATGCCACCAATCTTTCAGTTGGGGTGACATGTAGTGGTTCCAGTCCATATCTGGGTTAACTAAGATAATACATGGTAAACCACCTTTAACAATCCTATCTTTACCGTACTTAACATTAACAATAAAATCAGACTGCCCTCCCACAAGTGATTTTAGAGTTTCAGTCTTAATAGTCTTATAACTAATATCGTCTATAACATTATATAAAGCGAACTGATCATAAAAACTAAAACTTAATTTATTCATAAAATAATTATGCCGTCCTAGGCTTCTGGCCCATTGGGTCTTCCCTGTTCTGGACGGGCCACAGATGTAGAGGGACTGTCTCCTCCTGCCCTGCTGGTCTGGTTCCTGAAAGAATTTGATTCTAAGTCAGAAGGGACCCTATCTAGAAAAAACGACCCTCTGATGAGCGAGTCGTCGTCGTACACTTGTGGTGCACAGTCATTACACAGTACGTAGTTGGTCGTCCATCTGCTTACCAGTAGTACATTATCTGCGGCCCACTGTCTAACGGTGTCTGGAAGCCCAGGGAAATCGTGCCATCTGGGTGTGTACAGATCAGGTTGGGCTTGGAAATGGGCCTCGGCAAAGGCAGAGACTGCTGGCCATCTGAGGACGAAGTCCTGAGGTCTGTCAGCCCTGACTCTGGAGAGGAAGGTGTCCTTGTCGTTGGACTCAGCAAGAATTCTGGCCCAAATAGTGTTTGCCTTAACTGTTGTATCAGGGGATGATCGTTTGTCATTAAATTCCCCTGACTCGACAAAATTGCCGTCCTTTCTGATGTAGTCGTAGGAGGCCTTGGGGCTGATGAGTTTCTGAATATTTGGGTGATACGTCTTCCGTACCCCCTCCTGCACAGAGAAATCAAAAAAATTATGCCGTTTAATTGAGACCCTTTTGTTACACTGAAACATGGCATGCAGATGAGGCGAACCATCTGCATGTTTTTCAGATGCTACCAGAATATAATTAGGTGAAAAAGTGTTCAGGATATTGAGAAGATGGGTTAGAATTAGGTCCGGGGTGACCGGACATTTTGGGTAAGTGAGAAAGCCATTTTTGGCTTGGAAACGGAATTGGGCCGACCTTGAAGATTCGGCCCGGTCAGATGTGTTTGGTACACGTGGCATTTTTGGCTCCTGTCCGTACTTTGCAAAACTGGCTGATTCTTATGGAGTCAAGAGCCCTGAAGAGTCACGAAGAGAAAGGGAGTGTTTGTGAAGGAGTAGAGGGCTGATGGGGCTTCGCGTTGAGGAGCCAGAGCTGACGCGGGGGTATTAATATT
Gene Information
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NCBI Accession
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QJX74412.1
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Location
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233-457 |
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Protein Name
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V3 |
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Coding Region
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ATGTCAGATATATCAGAGGTAGAGTATTGTTTGTCTAGTTCCAGTCTCACAGGTTTTTTTATTTGTATATCGATATTTTTATTATTATTATTCTGCCAGTATGGATACGTGGCAGTGCAGATTAGGCGACTTGCCAGAAACATTGACCGGCTGCCTGCACATGCTGGCATGCAAGTTCCTCCAGAACATGGAGGAGAGGGCAGAAATGCATATGGCCCTCATTAA |
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Protein Sequence
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MSDISEVEYCLSSSSLTGFFICISIFLLLLFCQYGYVAVQIRRLARNIDRLPAHAGMQVPPEHGGEGRNAYGPH |
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NCBI Accession
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QJX74411.1
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Location
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333-779 |
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Protein Name
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V2 |
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Coding Region
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ATGGATACGTGGCAGTGCAGATTAGGCGACTTGCCAGAAACATTGACCGGCTGCCTGCACATGCTGGCATGCAAGTTCCTCCAGAACATGGAGGAGAGGGCAGAAATGCATATGGCCCTCATTAATCCCGAGTACGGGATGCCTGAGGCCAAGAGTTACTATGAACACATGATTGCTAAACAGGAGATCCGTGATTTGCTTAGGTTAATTAGGAGATTAGGGAGAGTGAAGGACAAGAGTAGTGTTAATGGCGATTACAAGGTCTATGCAGAGGAGCTCAGGAATAGGACTGCTTCCAGGTTGGGGAAGAAGACAGAGGAGACGGGGCCCACCAAGGAAGAGCCGGTACCAGCGAAGTGTACCTGGTCTGAGTGGGCCAAGTCGTTGGGGCCGACGGTCAAAAAGGACAAGGAGGACCAGATACCGCAAGGTCCCGATTGGGTGTAA |
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Protein Sequence
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MDTWQCRLGDLPETLTGCLHMLACKFLQNMEERAEMHMALINPEYGMPEAKSYYEHMIAKQEIRDLLRLIRRLGRVKDKSSVNGDYKVYAEELRNRTASRLGKKTEETGPTKEEPVPAKCTWSEWAKSLGPTVKKDKEDQIPQGPDWV |
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NCBI Accession
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QJX74410.1
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Location
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580-1350 |
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Protein Name
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V1 |
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Coding Region
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ATGGCGATTACAAGGTCTATGCAGAGGAGCTCAGGAATAGGACTGCTTCCAGGTTGGGGAAGAAGACAGAGGAGACGGGGCCCACCAAGGAAGAGCCGGTACCAGCGAAGTGTACCTGGTCTGAGTGGGCCAAGTCGTTGGGGCCGACGGTCAAAAAGGACAAGGAGGACCAGATACCGCAAGGTCCCGATTGGGTGTAAGGGCCCCTGTAAAACTTTAACTTATGATAATAAAGGTGTTATTGACCACACCGGTGGTTATATTGTTCATATATCGCGTATTGACCGTGGTGAAGAGTTTGTGGACCGTACTGGGAAACGTGTTAAAATTAAAGCGATTAGAATGATGGGTAAAATATATCTGGATGGTCAGTATAAGGCCAATCCTGGGGTGACAACTGTACGTTTGTATATTATTAGAGATGCTCGTCCTGGCAGTCAACAGCTTGCTTTTGATGCATTTATGGACATGAAAGATAAAGAACCCACAACGGCAATGATAAAAACAGATTACAGAGACCGTTTGAAAATATTAAAATATATAGATTTGGAAGTGGCAGGTGGCAAGGATTTTAGGGTGGATGAGCAGACTTTTGAATTATTTATGGATGGATTAAATCATGAAATTGTTTATAATCACAATGATCAAGGCACACTGGACAATATACTGAGTGGATCTCTTCATATTTATCAGACTTGTAGTAATCCTGATATGAAAGTTAATGTTAATGCGACTGTTCGTTTGTATATGTTTGATTCTCTACAGAATTGA |
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Protein Sequence
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MAITRSMQRSSGIGLLPGWGRRQRRRGPPRKSRYQRSVPGLSGPSRWGRRSKRTRRTRYRKVPIGCKGPCKTLTYDNKGVIDHTGGYIVHISRIDRGEEFVDRTGKRVKIKAIRMMGKIYLDGQYKANPGVTTVRLYIIRDARPGSQQLAFDAFMDMKDKEPTTAMIKTDYRDRLKILKYIDLEVAGGKDFRVDEQTFELFMDGLNHEIVYNHNDQGTLDNILSGSLHIYQTCSNPDMKVNVNATVRLYMFDSLQN |
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NCBI Accession
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QJX74413.1
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Location
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1301-1603 |
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Protein Name
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V4 |
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Coding Region
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ATGTTAATGCGACTGTTCGTTTGTATATGTTTGATTCTCTACAGAATTGACGGTCAAGGAGACTGGGTAAAGGTATTCAAGGTGGACCCACATATTCACCCCCACACAGTCCCCCCCCTCCTGATAAGAAATCCGATACCAGTGGCCCAAGTGGTCCCCAGTCAGAACCGTACACACCAGAACAGAAGAAAAAGGTTAAAGGAGATGACCGAGAAGATAGATCAAGTCAACAATCATATACATCAGACTATTCGACATCTGGATCAACTAATAGAAGATCACCGTTTGAAGACCCAGAGTTAA |
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Protein Sequence
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MLMRLFVCICLILYRIDGQGDWVKVFKVDPHIHPHTVPPLLIRNPIPVAQVVPSQNRTHQNRRKRLKEMTEKIDQVNNHIHQTIRHLDQLIEDHRLKTQS |
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NCBI Accession
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QJX74415.1
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Location
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NA |
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Protein Name
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C1:C2 |
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Coding Region
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ATGCCACGTGTACCAAACACATCTGACCGGGCCGAATCTTCAAGGTCGGCCCAATTCCGTTTCCAAGCCAAAAATGGCTTTCTCACTTACCCAAAATGTCCGGTCACCCCGGACCTAATTCTAACCCATCTTCTCAATATCCTGAACACTTTTTCACCTAATTATATTCTGGTAGCATCTGAAAAACATGCAGATGGTTCGCCTCATCTGCATGCCATGTTTCAGTGTAACAAAAGGGTCTCAATTAAACGGCATAATTTTTTTGATTTCTCTGTGCAGGAGGGGGTACGGAAGACGTATCACCCAAATATTCAGAAACTCATCAGCCCCAAGGCCTCCTACGACTACATCAGAAAGGACGGCAATTTTGTCGAGTCAGGGGAATTTAATGACAAACGATCATCCCCTGATACAACAGTTAAGGCAAACACTATTTGGGCCAGAATTCTTGCTGAGTCCAACGACAAGGACACCTTCCTCTCCAGAGTCAGGGCTGACAGACCTCAGGACTTCGTCCTCAGATGGCCAGCAGTCTCTGCCTTTGCCGAGGCCCATTTCCAAGCCCAACCTGATCTGTACACACCCAGATGGCACGATTTCCCTGGGCTTCCAGACACCGTTAGACAGTGGGCCGCAGATAATGTACTACTGGAACCAGACCAGCAGGGCAGGAGGAGACAGTCCCTCTACATCTGTGGCCCGTCCAGAACAGGGAAGACCCAATGGGCCAGAAGCCTAGGACGGCATAATTATTTTATGAATAAATTAAGTTTTAGTTTTTATGATCAGTTCGCTTTATATAATGTTATAGACGATATTAGTTATAAGACTATTAAGACTGAAACTCTAAAATCACTTGTGGGAGGGCAGTCTGATTTTATTGTTAATGTTAAGTACGGTAAAGATAGGATTGTTAAAGGTGGTTTACCATGTATTATCTTAGTTAACCCAGATATGGACTGGAACCACTACATGTCACCCCAACTGAAAGATTGGTGGCATTCAAATGTAATCGAATATTATTTATATGAAAATGAAAAATTTTATTAA |
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Protein Sequence
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MPRVPNTSDRAESSRSAQFRFQAKNGFLTYPKCPVTPDLILTHLLNILNTFSPNYILVASEKHADGSPHLHAMFQCNKRVSIKRHNFFDFSVQEGVRKTYHPNIQKLISPKASYDYIRKDGNFVESGEFNDKRSSPDTTVKANTIWARILAESNDKDTFLSRVRADRPQDFVLRWPAVSAFAEAHFQAQPDLYTPRWHDFPGLPDTVRQWAADNVLLEPDQQGRRRQSLYICGPSRTGKTQWARSLGRHNYFMNKLSFSFYDQFALYNVIDDISYKTIKTETLKSLVGGQSDFIVNVKYGKDRIVKGGLPCIILVNPDMDWNHYMSPQLKDWWHSNVIEYYLYENEKFY |
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NCBI Accession
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QJX74414.1
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Location
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2032-2901 |
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Protein Name
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C1 |
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Coding Region
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ATGCCACGTGTACCAAACACATCTGACCGGGCCGAATCTTCAAGGTCGGCCCAATTCCGTTTCCAAGCCAAAAATGGCTTTCTCACTTACCCAAAATGTCCGGTCACCCCGGACCTAATTCTAACCCATCTTCTCAATATCCTGAACACTTTTTCACCTAATTATATTCTGGTAGCATCTGAAAAACATGCAGATGGTTCGCCTCATCTGCATGCCATGTTTCAGTGTAACAAAAGGGTCTCAATTAAACGGCATAATTTTTTTGATTTCTCTGTGCAGGAGGGGGTACGGAAGACGTATCACCCAAATATTCAGAAACTCATCAGCCCCAAGGCCTCCTACGACTACATCAGAAAGGACGGCAATTTTGTCGAGTCAGGGGAATTTAATGACAAACGATCATCCCCTGATACAACAGTTAAGGCAAACACTATTTGGGCCAGAATTCTTGCTGAGTCCAACGACAAGGACACCTTCCTCTCCAGAGTCAGGGCTGACAGACCTCAGGACTTCGTCCTCAGATGGCCAGCAGTCTCTGCCTTTGCCGAGGCCCATTTCCAAGCCCAACCTGATCTGTACACACCCAGATGGCACGATTTCCCTGGGCTTCCAGACACCGTTAGACAGTGGGCCGCAGATAATGTACTACTGGTAAGCAGATGGACGACCAACTACGTACTGTGTAATGACTGTGCACCACAAGTGTACGACGACGACTCGCTCATCAGAGGGTCGTTTTTTCTAGATAGGGTCCCTTCTGACTTAGAATCAAATTCTTTCAGGAACCAGACCAGCAGGGCAGGAGGAGACAGTCCCTCTACATCTGTGGCCCGTCCAGAACAGGGAAGACCCAATGGGCCAGAAGCCTAG |
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Protein Sequence
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MPRVPNTSDRAESSRSAQFRFQAKNGFLTYPKCPVTPDLILTHLLNILNTFSPNYILVASEKHADGSPHLHAMFQCNKRVSIKRHNFFDFSVQEGVRKTYHPNIQKLISPKASYDYIRKDGNFVESGEFNDKRSSPDTTVKANTIWARILAESNDKDTFLSRVRADRPQDFVLRWPAVSAFAEAHFQAQPDLYTPRWHDFPGLPDTVRQWAADNVLLVSRWTTNYVLCNDCAPQVYDDDSLIRGSFFLDRVPSDLESNSFRNQTSRAGGDSPSTSVARPEQGRPNGPEA |