Wheat dwarf India virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000894555.1
Isolate India
Release date 2015/2/22
Submitter Kumar,J., Singh,S.P., Tuli,R.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_017828
ACCCGCGTCGCCCGTAGCATCGCGACGTGGAACGTGGGCCTCTACGTGACACGGAGCCGCATTAATTAAAGTAAAGATGCCCGGTCGCTGTCAGCTTTAATTGGTAGATGGTGCGTCATTTTCCCGGCCCGCGCTGCCTTTCCTTTATAAAGAGGTGACTCGGAGGTGACTTCGATGGGGTCTGCTCGTCTAGGTGAGTTCTCTCCGCTTGCTTACCCTGGAAGCATCGCATATATCCCCCAATCTCCTCCCGCAGTTCAGAACGAGGACCCGTGGATCCGCCTGGTCTTCGTTTTTGTAGCGGTAATTGCTGCAATCGGTTTGCTTTATCTGAGTTACCGCTGGTTCGTCAGGGATGTCATCATACTCCTTCGGGCGAAGAGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGCTCGGCCCGACGGTGGACAGCCTAGCACCAGACGAGGACCTGATCCCTCGGCTGCTGCACCTCCTTACTGAGGCCAGGCTTCTTGTTCAGGAGCTTGCCGACGGATCCCTAACCGATGTCTCAGGTGAAGAAGAGGACCCGTCGGGGGGACGAAGTGGAGTGGTCAAAGCGCAAGCGGTTGAGGTCGTCCGGGTCGAAAGGATCGGCGACCAAGCTTAGGAAGCTCCCGGTGAGGCCCAGTCTGCAGATTCAGTCGCTGTACTATACGCTCACCACCTATGTAGACTTCAAGACAGGTGGTGAAAGTTATCTGATGGCCTCTTACGCCCGTGGTTCCGACGAAGGTGAGAGGCATACTAACGAGACTATGACGTATAAGGCAGCCCTGAACCTACATCTGTCTGCCTCCTCGGATGCTTGTAAATATTCTAATACAGGCACAGGCTGCATCTGGTTGATTTACGATGCACAGCCCACGGGAAATAAACCGTCTCCGAAGGACATCTTCGGGTACTCGGACAGCCTCAACTCCTGGCCAACAACATGGATGGTTTCTCGGGAGCAGTGCCATCGTTTCGTCGTTAAGAGGCGATGGACGTTCACCCTGGAGACTAACGGGAGGCTCGCATCTGATGTTCCTCCTTCGAACGTCGTCTGGCCTCCGTGCAAGAAGAGCATTAACTTCCACAAGTTCGCCAAGGGTCTGGGTGTGCGTACTGAGTGGAAGAATAAAACAGACGGGGGGATTGGCTCGATCAAAAAAGGTGCCTTGTACTTTGTAATAGCTCCGGGTAACGGAGTAGAGGGACGGATGTTTGGTACGATCCGTATGTACTTCAAGAGTATCGGTAACCAGTAAAGGTTGCTCATATATGTAATAAACCATATTTTATTAATAAAATGGCCATGCTTACAAGAAAAAACACACATACAATACAGGGTGGACAGGACAAAGGCGGGCGGATAAGGGTGGCCGCAAGGGGCAAAACATTAAAAAAAAACACACTCTGTTAAACAATTTCGGCCCCGCCGAAGAACTTCTCCGTTGGTTCCATCATGTAAATGATGGAATTGGCTTCGAAGTACTCCTGTTGTTCCGGGGTCATTGTCTTCAGCCAATCCTCATCGCTGTTAACGAGGATGATTGAGGGGATGCCTCCTTTTATTAACTTCTTCTTACCGTACTTAGGGTTTACGGTGAAGTCCCTCTGGGCCGCTACCAACTGTTTCCAGCAAGGGCAGAATTTAAATGGAATGTCGTCGATTATGTTATATGCCGCTTCTGGATCGTAGACTGTAAAGTCTACATTATTCTGCCAGTAGTTGTGTCGGCCCAGGGACCTTGCCCATGTAGATTTTCCGGTCCTTGTTGGACCGACGATGTAGAGGCTCTTTGGCCTTGTTCCTGCAGATGGATCCTGGAATTTTCCTGCAACCATGTCAGTTCTTGTACAGCCTCTGCTACGCTGTTTATGGTTGGTGTGTTTAGCATATAACAATAAGGGTGTACCTGGAAAAGGTTAGAATCTATCCAGTCTTGGATAGTTTCGTAGCAGTAGAGGTCTGGTACAGATTGGCCGTGGGGATTGCTGTACTCTGGTTGTTGTTCAGGGAAGAGCTTCGAGGCACTATACTCGAAGTTGTATAGTTTAGTGGCCCAGTCATATGGGAAGTTTCTTCTGACTTTACTTAGGTAGTCAGACTTGTTGGTGGAGTTCTCTATGATATCTTTCATGATATCATCTCTGGATCGTTTATTGGAATGCCTAGGACTGGTTCCTGCATTTCTCCCTCTGGGGATAAATGCTCCCTTCTCGCTAAAAGTAATTGGACCCTTAAGGATGTAATCTCGGCATAATGTTGGGTTCTTTGCAGCTTGTATGTGAGGATGATGACCATCAAAATCAAAGAAATGAGGATCATTGGTAGAAATTTGCTTGCGAGTCTGTAGGAGAGCATGGAGATGAGGTGTACCATCCTGGTGTAGTTCGACAGAAGCAACAGCATAGATAGGACTCCAAGTAGAAATGAGGTCCCAGAAGTGTTGAACCATTCCATATGGGCAGGAATTACAGTGGGGAAATGTAAGAAAGCAGTTATTACTGCGGTACCTGAAGGTTGAAGACGAGGCTTTGGGGTTAGCCGAGTTGTTCTCAGCGGAAGTCTGAGACATAGCGTGTCTGATGCTAACACTCTCTGGGACTTAGCCGCGTTTCCGTCGGCTCGAGTTTTATCGATACTCTCTCGATGCGCGATCTTCCCAGCGCTGCGGCGGGGTTTTTATAATGGTTTCCGATCTGACACCTGGGACCAGGGGGGCCCAGGAGCGATGGCGAAGGGCGCGCGCGGCAATAATATT

Gene Information

NCBI Accession YP_006273068.1
Location 175-495
Gene Name V1
Protein Name movement protein
Coding Region ATGGGGTCTGCTCGTCTAGGTGAGTTCTCTCCGCTTGCTTACCCTGGAAGCATCGCATATATCCCCCAATCTCCTCCCGCAGTTCAGAACGAGGACCCGTGGATCCGCCTGGTCTTCGTTTTTGTAGCGGTAATTGCTGCAATCGGTTTGCTTTATCTGAGTTACCGCTGGTTCGTCAGGGATGTCATCATACTCCTTCGGGCGAAGAGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGCTCGGCCCGACGGTGGACAGCCTAGCACCAGACGAGGACCTGATCCCTCGGCTGCTGCACCTCCTTACTGA
Protein Sequence MGSARLGEFSPLAYPGSIAYIPQSPPAVQNEDPWIRLVFVFVAVIAAIGLLYLSYRWFVRDVIILLRAKRQRSTEEIGFGNTPARPDGGQPSTRRGPDPSAAAPPY

NCBI Accession YP_006273069.1
Location 540-1283
Gene Name V2
Protein Name coat protein
Coding Region ATGTCTCAGGTGAAGAAGAGGACCCGTCGGGGGGACGAAGTGGAGTGGTCAAAGCGCAAGCGGTTGAGGTCGTCCGGGTCGAAAGGATCGGCGACCAAGCTTAGGAAGCTCCCGGTGAGGCCCAGTCTGCAGATTCAGTCGCTGTACTATACGCTCACCACCTATGTAGACTTCAAGACAGGTGGTGAAAGTTATCTGATGGCCTCTTACGCCCGTGGTTCCGACGAAGGTGAGAGGCATACTAACGAGACTATGACGTATAAGGCAGCCCTGAACCTACATCTGTCTGCCTCCTCGGATGCTTGTAAATATTCTAATACAGGCACAGGCTGCATCTGGTTGATTTACGATGCACAGCCCACGGGAAATAAACCGTCTCCGAAGGACATCTTCGGGTACTCGGACAGCCTCAACTCCTGGCCAACAACATGGATGGTTTCTCGGGAGCAGTGCCATCGTTTCGTCGTTAAGAGGCGATGGACGTTCACCCTGGAGACTAACGGGAGGCTCGCATCTGATGTTCCTCCTTCGAACGTCGTCTGGCCTCCGTGCAAGAAGAGCATTAACTTCCACAAGTTCGCCAAGGGTCTGGGTGTGCGTACTGAGTGGAAGAATAAAACAGACGGGGGGATTGGCTCGATCAAAAAAGGTGCCTTGTACTTTGTAATAGCTCCGGGTAACGGAGTAGAGGGACGGATGTTTGGTACGATCCGTATGTACTTCAAGAGTATCGGTAACCAGTAA
Protein Sequence MSQVKKRTRRGDEVEWSKRKRLRSSGSKGSATKLRKLPVRPSLQIQSLYYTLTTYVDFKTGGESYLMASYARGSDEGERHTNETMTYKAALNLHLSASSDACKYSNTGTGCIWLIYDAQPTGNKPSPKDIFGYSDSLNSWPTTWMVSREQCHRFVVKRRWTFTLETNGRLASDVPPSNVVWPPCKKSINFHKFAKGLGVRTEWKNKTDGGIGSIKKGALYFVIAPGNGVEGRMFGTIRMYFKSIGNQ

NCBI Accession YP_006273070.1
Location 1435-1810,1900-2597
Gene Name Rep
Protein Name replicase
Coding Region ATGTCTCAGACTTCCGCTGAGAACAACTCGGCTAACCCCAAAGCCTCGTCTTCAACCTTCAGGTACCGCAGTAATAACTGCTTTCTTACATTTCCCCACTGTAATTCCTGCCCATATGGAATGGTTCAACACTTCTGGGACCTCATTTCTACTTGGAGTCCTATCTATGCTGTTGCTTCTGTCGAACTACACCAGGATGGTACACCTCATCTCCATGCTCTCCTACAGACTCGCAAGCAAATTTCTACCAATGATCCTCATTTCTTTGATTTTGATGGTCATCATCCTCACATACAAGCTGCAAAGAACCCAACATTATGCCGAGATTACATCCTTAAGGGTCCAATTACTTTTAGCGAGAAGGGAGCATTTATCCCCAGAGGGAGAAATGCAGGAACCAGTCCTAGGCATTCCAATAAACGATCCAGAGATGATATCATGAAAGATATCATAGAGAACTCCACCAACAAGTCTGACTACCTAAGTAAAGTCAGAAGAAACTTCCCATATGACTGGGCCACTAAACTATACAACTTCGAGTATAGTGCCTCGAAGCTCTTCCCTGAACAACAACCAGAGTACAGCAATCCCCACGGCCAATCTGTACCAGACCTCTACTGCTACGAAACTATCCAAGACTGGATAGATTCTAACCTTTTCCAGGTACACCCTTATTGTTATATGCTAAACACACCAACCTACATCGTCGGTCCAACAAGGACCGGAAAATCTACATGGGCAAGGTCCCTGGGCCGACACAACTACTGGCAGAATAATGTAGACTTTACAGTCTACGATCCAGAAGCGGCATATAACATAATCGACGACATTCCATTTAAATTCTGCCCTTGCTGGAAACAGTTGGTAGCGGCCCAGAGGGACTTCACCGTAAACCCTAAGTACGGTAAGAAGAAGTTAATAAAAGGAGGCATCCCCTCAATCATCCTCGTTAACAGCGATGAGGATTGGCTGAAGACAATGACCCCGGAACAACAGGAGTACTTCGAAGCCAATTCCATCATTTACATGATGGAACCAACGGAGAAGTTCTTCGGCGGGGCCGAAATTGTTTAA
Protein Sequence MSQTSAENNSANPKASSSTFRYRSNNCFLTFPHCNSCPYGMVQHFWDLISTWSPIYAVASVELHQDGTPHLHALLQTRKQISTNDPHFFDFDGHHPHIQAAKNPTLCRDYILKGPITFSEKGAFIPRGRNAGTSPRHSNKRSRDDIMKDIIENSTNKSDYLSKVRRNFPYDWATKLYNFEYSASKLFPEQQPEYSNPHGQSVPDLYCYETIQDWIDSNLFQVHPYCYMLNTPTYIVGPTRTGKSTWARSLGRHNYWQNNVDFTVYDPEAAYNIIDDIPFKFCPCWKQLVAAQRDFTVNPKYGKKKLIKGGIPSIILVNSDEDWLKTMTPEQQEYFEANSIIYMMEPTEKFFGGAEIV

NCBI Accession YP_006273071.1
Location 1728-2597
Gene Name RepA
Protein Name RepA
Coding Region ATGTCTCAGACTTCCGCTGAGAACAACTCGGCTAACCCCAAAGCCTCGTCTTCAACCTTCAGGTACCGCAGTAATAACTGCTTTCTTACATTTCCCCACTGTAATTCCTGCCCATATGGAATGGTTCAACACTTCTGGGACCTCATTTCTACTTGGAGTCCTATCTATGCTGTTGCTTCTGTCGAACTACACCAGGATGGTACACCTCATCTCCATGCTCTCCTACAGACTCGCAAGCAAATTTCTACCAATGATCCTCATTTCTTTGATTTTGATGGTCATCATCCTCACATACAAGCTGCAAAGAACCCAACATTATGCCGAGATTACATCCTTAAGGGTCCAATTACTTTTAGCGAGAAGGGAGCATTTATCCCCAGAGGGAGAAATGCAGGAACCAGTCCTAGGCATTCCAATAAACGATCCAGAGATGATATCATGAAAGATATCATAGAGAACTCCACCAACAAGTCTGACTACCTAAGTAAAGTCAGAAGAAACTTCCCATATGACTGGGCCACTAAACTATACAACTTCGAGTATAGTGCCTCGAAGCTCTTCCCTGAACAACAACCAGAGTACAGCAATCCCCACGGCCAATCTGTACCAGACCTCTACTGCTACGAAACTATCCAAGACTGGATAGATTCTAACCTTTTCCAGGTACACCCTTATTGTTATATGCTAAACACACCAACCATAAACAGCGTAGCAGAGGCTGTACAAGAACTGACATGGTTGCAGGAAAATTCCAGGATCCATCTGCAGGAACAAGGCCAAAGAGCCTCTACATCGTCGGTCCAACAAGGACCGGAAAATCTACATGGGCAAGGTCCCTGGGCCGACACAACTACTGGCAGAATAATGTAG
Protein Sequence MSQTSAENNSANPKASSSTFRYRSNNCFLTFPHCNSCPYGMVQHFWDLISTWSPIYAVASVELHQDGTPHLHALLQTRKQISTNDPHFFDFDGHHPHIQAAKNPTLCRDYILKGPITFSEKGAFIPRGRNAGTSPRHSNKRSRDDIMKDIIENSTNKSDYLSKVRRNFPYDWATKLYNFEYSASKLFPEQQPEYSNPHGQSVPDLYCYETIQDWIDSNLFQVHPYCYMLNTPTINSVAEAVQELTWLQENSRIHLQEQGQRASTSSVQQGPENLHGQGPWADTTTGRIM

References More References in PubMed

1

Study of Triticum aestivum Resistome in Response to Wheat dwarf India Virus Infection.

Kumar J, et al.  Life (Basel). 2021 Sep 13;11(9):955. doi: 10.3390/life11090955.

PMID: 34575104

2

Association of satellites with a mastrevirus in natural infection: complexity of Wheat dwarf India virus disease.

Kumar J, et al.  J Virol. 2014 Jun;88(12):7093-104. doi: 10.1128/JVI.02911-13. Epub 2014 Apr 9.

PMID: 24719407

3

A novel mastrevirus infecting wheat in India.

Kumar J, et al.  Arch Virol. 2012 Oct;157(10):2031-4. doi: 10.1007/s00705-012-1359-y. Epub 2012 Jul 3.

PMID: 22752839

4

Catalase regulation during plant-virus-vector interaction.

Sharma R, et al.  Physiol Plant. 2024 Sep-Oct;176(5):e14580. doi: 10.1111/ppl.14580.

PMID: 39403868

5

Phytoplasma etiology and epidemiology of wheat streak and stunting disease in Central India.

Kumar M, et al.  3 Biotech. 2024 Nov;14(11):268. doi: 10.1007/s13205-024-04114-3. Epub 2024 Oct 14.

PMID: 39416670

6

Viral Challenges in Wheat: Comprehensive Diagnosis and Innovative Management Approaches.

Tanu, et al.  Curr Microbiol. 2025 May 20;82(7):294. doi: 10.1007/s00284-025-04280-4.

PMID: 40392308

7

A geminivirus crosses the monocot-dicot boundary and acts as a viral vector for gene silencing and genome editing.

Kumar J, et al.  J Adv Res. 2024 Jul;61:35-45. doi: 10.1016/j.jare.2023.09.013. Epub 2023 Sep 18.

PMID: 37730118

8

βC1 is a pathogenicity determinant: not only for begomoviruses but also for a mastrevirus.

Kumar J, et al.  Arch Virol. 2014 Nov;159(11):3071-6. doi: 10.1007/s00705-014-2149-5. Epub 2014 Jul 8.

PMID: 25000899

9

A Gemini Virus-Derived Autonomously Replicating System for HDR-Mediated Genome Editing of the EPSP Synthase Gene in Indica Rice.

Borphukan B, et al.  Plants (Basel). 2025 Feb 6;14(3):477. doi: 10.3390/plants14030477.

PMID: 39943039

10

First Report of Sugarcane mosaic virus Infecting Maize in Poland.

Trzmiel K.  Plant Dis. 2009 Oct;93(10):1078. doi: 10.1094/PDIS-93-10-1078B.

PMID: 30754365