Wheat dwarf India virus

Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000894555.1
Isolate India
Release date 2015/2/22
Submitter Kumar,J., Singh,S.P., Tuli,R.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_017828
ACCCGCGTCGCCCGTAGCATCGCGACGTGGAACGTGGGCCTCTACGTGACACGGAGCCGCATTAATTAAAGTAAAGATGCCCGGTCGCTGTCAGCTTTAATTGGTAGATGGTGCGTCATTTTCCCGGCCCGCGCTGCCTTTCCTTTATAAAGAGGTGACTCGGAGGTGACTTCGATGGGGTCTGCTCGTCTAGGTGAGTTCTCTCCGCTTGCTTACCCTGGAAGCATCGCATATATCCCCCAATCTCCTCCCGCAGTTCAGAACGAGGACCCGTGGATCCGCCTGGTCTTCGTTTTTGTAGCGGTAATTGCTGCAATCGGTTTGCTTTATCTGAGTTACCGCTGGTTCGTCAGGGATGTCATCATACTCCTTCGGGCGAAGAGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGCTCGGCCCGACGGTGGACAGCCTAGCACCAGACGAGGACCTGATCCCTCGGCTGCTGCACCTCCTTACTGAGGCCAGGCTTCTTGTTCAGGAGCTTGCCGACGGATCCCTAACCGATGTCTCAGGTGAAGAAGAGGACCCGTCGGGGGGACGAAGTGGAGTGGTCAAAGCGCAAGCGGTTGAGGTCGTCCGGGTCGAAAGGATCGGCGACCAAGCTTAGGAAGCTCCCGGTGAGGCCCAGTCTGCAGATTCAGTCGCTGTACTATACGCTCACCACCTATGTAGACTTCAAGACAGGTGGTGAAAGTTATCTGATGGCCTCTTACGCCCGTGGTTCCGACGAAGGTGAGAGGCATACTAACGAGACTATGACGTATAAGGCAGCCCTGAACCTACATCTGTCTGCCTCCTCGGATGCTTGTAAATATTCTAATACAGGCACAGGCTGCATCTGGTTGATTTACGATGCACAGCCCACGGGAAATAAACCGTCTCCGAAGGACATCTTCGGGTACTCGGACAGCCTCAACTCCTGGCCAACAACATGGATGGTTTCTCGGGAGCAGTGCCATCGTTTCGTCGTTAAGAGGCGATGGACGTTCACCCTGGAGACTAACGGGAGGCTCGCATCTGATGTTCCTCCTTCGAACGTCGTCTGGCCTCCGTGCAAGAAGAGCATTAACTTCCACAAGTTCGCCAAGGGTCTGGGTGTGCGTACTGAGTGGAAGAATAAAACAGACGGGGGGATTGGCTCGATCAAAAAAGGTGCCTTGTACTTTGTAATAGCTCCGGGTAACGGAGTAGAGGGACGGATGTTTGGTACGATCCGTATGTACTTCAAGAGTATCGGTAACCAGTAAAGGTTGCTCATATATGTAATAAACCATATTTTATTAATAAAATGGCCATGCTTACAAGAAAAAACACACATACAATACAGGGTGGACAGGACAAAGGCGGGCGGATAAGGGTGGCCGCAAGGGGCAAAACATTAAAAAAAAACACACTCTGTTAAACAATTTCGGCCCCGCCGAAGAACTTCTCCGTTGGTTCCATCATGTAAATGATGGAATTGGCTTCGAAGTACTCCTGTTGTTCCGGGGTCATTGTCTTCAGCCAATCCTCATCGCTGTTAACGAGGATGATTGAGGGGATGCCTCCTTTTATTAACTTCTTCTTACCGTACTTAGGGTTTACGGTGAAGTCCCTCTGGGCCGCTACCAACTGTTTCCAGCAAGGGCAGAATTTAAATGGAATGTCGTCGATTATGTTATATGCCGCTTCTGGATCGTAGACTGTAAAGTCTACATTATTCTGCCAGTAGTTGTGTCGGCCCAGGGACCTTGCCCATGTAGATTTTCCGGTCCTTGTTGGACCGACGATGTAGAGGCTCTTTGGCCTTGTTCCTGCAGATGGATCCTGGAATTTTCCTGCAACCATGTCAGTTCTTGTACAGCCTCTGCTACGCTGTTTATGGTTGGTGTGTTTAGCATATAACAATAAGGGTGTACCTGGAAAAGGTTAGAATCTATCCAGTCTTGGATAGTTTCGTAGCAGTAGAGGTCTGGTACAGATTGGCCGTGGGGATTGCTGTACTCTGGTTGTTGTTCAGGGAAGAGCTTCGAGGCACTATACTCGAAGTTGTATAGTTTAGTGGCCCAGTCATATGGGAAGTTTCTTCTGACTTTACTTAGGTAGTCAGACTTGTTGGTGGAGTTCTCTATGATATCTTTCATGATATCATCTCTGGATCGTTTATTGGAATGCCTAGGACTGGTTCCTGCATTTCTCCCTCTGGGGATAAATGCTCCCTTCTCGCTAAAAGTAATTGGACCCTTAAGGATGTAATCTCGGCATAATGTTGGGTTCTTTGCAGCTTGTATGTGAGGATGATGACCATCAAAATCAAAGAAATGAGGATCATTGGTAGAAATTTGCTTGCGAGTCTGTAGGAGAGCATGGAGATGAGGTGTACCATCCTGGTGTAGTTCGACAGAAGCAACAGCATAGATAGGACTCCAAGTAGAAATGAGGTCCCAGAAGTGTTGAACCATTCCATATGGGCAGGAATTACAGTGGGGAAATGTAAGAAAGCAGTTATTACTGCGGTACCTGAAGGTTGAAGACGAGGCTTTGGGGTTAGCCGAGTTGTTCTCAGCGGAAGTCTGAGACATAGCGTGTCTGATGCTAACACTCTCTGGGACTTAGCCGCGTTTCCGTCGGCTCGAGTTTTATCGATACTCTCTCGATGCGCGATCTTCCCAGCGCTGCGGCGGGGTTTTTATAATGGTTTCCGATCTGACACCTGGGACCAGGGGGGCCCAGGAGCGATGGCGAAGGGCGCGCGCGGCAATAATATT

Gene Information

NCBI Accession YP_006273068.1
Location 175-495
Gene Name V1
Protein Name movement protein
Coding Region ATGGGGTCTGCTCGTCTAGGTGAGTTCTCTCCGCTTGCTTACCCTGGAAGCATCGCATATATCCCCCAATCTCCTCCCGCAGTTCAGAACGAGGACCCGTGGATCCGCCTGGTCTTCGTTTTTGTAGCGGTAATTGCTGCAATCGGTTTGCTTTATCTGAGTTACCGCTGGTTCGTCAGGGATGTCATCATACTCCTTCGGGCGAAGAGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGCTCGGCCCGACGGTGGACAGCCTAGCACCAGACGAGGACCTGATCCCTCGGCTGCTGCACCTCCTTACTGA
Protein Sequence MGSARLGEFSPLAYPGSIAYIPQSPPAVQNEDPWIRLVFVFVAVIAAIGLLYLSYRWFVRDVIILLRAKRQRSTEEIGFGNTPARPDGGQPSTRRGPDPSAAAPPY

NCBI Accession YP_006273069.1
Location 540-1283
Gene Name V2
Protein Name coat protein
Coding Region ATGTCTCAGGTGAAGAAGAGGACCCGTCGGGGGGACGAAGTGGAGTGGTCAAAGCGCAAGCGGTTGAGGTCGTCCGGGTCGAAAGGATCGGCGACCAAGCTTAGGAAGCTCCCGGTGAGGCCCAGTCTGCAGATTCAGTCGCTGTACTATACGCTCACCACCTATGTAGACTTCAAGACAGGTGGTGAAAGTTATCTGATGGCCTCTTACGCCCGTGGTTCCGACGAAGGTGAGAGGCATACTAACGAGACTATGACGTATAAGGCAGCCCTGAACCTACATCTGTCTGCCTCCTCGGATGCTTGTAAATATTCTAATACAGGCACAGGCTGCATCTGGTTGATTTACGATGCACAGCCCACGGGAAATAAACCGTCTCCGAAGGACATCTTCGGGTACTCGGACAGCCTCAACTCCTGGCCAACAACATGGATGGTTTCTCGGGAGCAGTGCCATCGTTTCGTCGTTAAGAGGCGATGGACGTTCACCCTGGAGACTAACGGGAGGCTCGCATCTGATGTTCCTCCTTCGAACGTCGTCTGGCCTCCGTGCAAGAAGAGCATTAACTTCCACAAGTTCGCCAAGGGTCTGGGTGTGCGTACTGAGTGGAAGAATAAAACAGACGGGGGGATTGGCTCGATCAAAAAAGGTGCCTTGTACTTTGTAATAGCTCCGGGTAACGGAGTAGAGGGACGGATGTTTGGTACGATCCGTATGTACTTCAAGAGTATCGGTAACCAGTAA
Protein Sequence MSQVKKRTRRGDEVEWSKRKRLRSSGSKGSATKLRKLPVRPSLQIQSLYYTLTTYVDFKTGGESYLMASYARGSDEGERHTNETMTYKAALNLHLSASSDACKYSNTGTGCIWLIYDAQPTGNKPSPKDIFGYSDSLNSWPTTWMVSREQCHRFVVKRRWTFTLETNGRLASDVPPSNVVWPPCKKSINFHKFAKGLGVRTEWKNKTDGGIGSIKKGALYFVIAPGNGVEGRMFGTIRMYFKSIGNQ

NCBI Accession YP_006273070.1
Location 1435-1810,1900-2597
Gene Name Rep
Protein Name replicase
Coding Region ATGTCTCAGACTTCCGCTGAGAACAACTCGGCTAACCCCAAAGCCTCGTCTTCAACCTTCAGGTACCGCAGTAATAACTGCTTTCTTACATTTCCCCACTGTAATTCCTGCCCATATGGAATGGTTCAACACTTCTGGGACCTCATTTCTACTTGGAGTCCTATCTATGCTGTTGCTTCTGTCGAACTACACCAGGATGGTACACCTCATCTCCATGCTCTCCTACAGACTCGCAAGCAAATTTCTACCAATGATCCTCATTTCTTTGATTTTGATGGTCATCATCCTCACATACAAGCTGCAAAGAACCCAACATTATGCCGAGATTACATCCTTAAGGGTCCAATTACTTTTAGCGAGAAGGGAGCATTTATCCCCAGAGGGAGAAATGCAGGAACCAGTCCTAGGCATTCCAATAAACGATCCAGAGATGATATCATGAAAGATATCATAGAGAACTCCACCAACAAGTCTGACTACCTAAGTAAAGTCAGAAGAAACTTCCCATATGACTGGGCCACTAAACTATACAACTTCGAGTATAGTGCCTCGAAGCTCTTCCCTGAACAACAACCAGAGTACAGCAATCCCCACGGCCAATCTGTACCAGACCTCTACTGCTACGAAACTATCCAAGACTGGATAGATTCTAACCTTTTCCAGGTACACCCTTATTGTTATATGCTAAACACACCAACCTACATCGTCGGTCCAACAAGGACCGGAAAATCTACATGGGCAAGGTCCCTGGGCCGACACAACTACTGGCAGAATAATGTAGACTTTACAGTCTACGATCCAGAAGCGGCATATAACATAATCGACGACATTCCATTTAAATTCTGCCCTTGCTGGAAACAGTTGGTAGCGGCCCAGAGGGACTTCACCGTAAACCCTAAGTACGGTAAGAAGAAGTTAATAAAAGGAGGCATCCCCTCAATCATCCTCGTTAACAGCGATGAGGATTGGCTGAAGACAATGACCCCGGAACAACAGGAGTACTTCGAAGCCAATTCCATCATTTACATGATGGAACCAACGGAGAAGTTCTTCGGCGGGGCCGAAATTGTTTAA
Protein Sequence MSQTSAENNSANPKASSSTFRYRSNNCFLTFPHCNSCPYGMVQHFWDLISTWSPIYAVASVELHQDGTPHLHALLQTRKQISTNDPHFFDFDGHHPHIQAAKNPTLCRDYILKGPITFSEKGAFIPRGRNAGTSPRHSNKRSRDDIMKDIIENSTNKSDYLSKVRRNFPYDWATKLYNFEYSASKLFPEQQPEYSNPHGQSVPDLYCYETIQDWIDSNLFQVHPYCYMLNTPTYIVGPTRTGKSTWARSLGRHNYWQNNVDFTVYDPEAAYNIIDDIPFKFCPCWKQLVAAQRDFTVNPKYGKKKLIKGGIPSIILVNSDEDWLKTMTPEQQEYFEANSIIYMMEPTEKFFGGAEIV

NCBI Accession YP_006273071.1
Location 1728-2597
Gene Name RepA
Protein Name RepA
Coding Region ATGTCTCAGACTTCCGCTGAGAACAACTCGGCTAACCCCAAAGCCTCGTCTTCAACCTTCAGGTACCGCAGTAATAACTGCTTTCTTACATTTCCCCACTGTAATTCCTGCCCATATGGAATGGTTCAACACTTCTGGGACCTCATTTCTACTTGGAGTCCTATCTATGCTGTTGCTTCTGTCGAACTACACCAGGATGGTACACCTCATCTCCATGCTCTCCTACAGACTCGCAAGCAAATTTCTACCAATGATCCTCATTTCTTTGATTTTGATGGTCATCATCCTCACATACAAGCTGCAAAGAACCCAACATTATGCCGAGATTACATCCTTAAGGGTCCAATTACTTTTAGCGAGAAGGGAGCATTTATCCCCAGAGGGAGAAATGCAGGAACCAGTCCTAGGCATTCCAATAAACGATCCAGAGATGATATCATGAAAGATATCATAGAGAACTCCACCAACAAGTCTGACTACCTAAGTAAAGTCAGAAGAAACTTCCCATATGACTGGGCCACTAAACTATACAACTTCGAGTATAGTGCCTCGAAGCTCTTCCCTGAACAACAACCAGAGTACAGCAATCCCCACGGCCAATCTGTACCAGACCTCTACTGCTACGAAACTATCCAAGACTGGATAGATTCTAACCTTTTCCAGGTACACCCTTATTGTTATATGCTAAACACACCAACCATAAACAGCGTAGCAGAGGCTGTACAAGAACTGACATGGTTGCAGGAAAATTCCAGGATCCATCTGCAGGAACAAGGCCAAAGAGCCTCTACATCGTCGGTCCAACAAGGACCGGAAAATCTACATGGGCAAGGTCCCTGGGCCGACACAACTACTGGCAGAATAATGTAG
Protein Sequence MSQTSAENNSANPKASSSTFRYRSNNCFLTFPHCNSCPYGMVQHFWDLISTWSPIYAVASVELHQDGTPHLHALLQTRKQISTNDPHFFDFDGHHPHIQAAKNPTLCRDYILKGPITFSEKGAFIPRGRNAGTSPRHSNKRSRDDIMKDIIENSTNKSDYLSKVRRNFPYDWATKLYNFEYSASKLFPEQQPEYSNPHGQSVPDLYCYETIQDWIDSNLFQVHPYCYMLNTPTINSVAEAVQELTWLQENSRIHLQEQGQRASTSSVQQGPENLHGQGPWADTTTGRIM

References More References in PubMed

1

Study of Triticum aestivum Resistome in Response to Wheat dwarf India Virus Infection.

Kumar J, et al.  Life (Basel). 2021 Sep 13;11(9):955. doi: 10.3390/life11090955.

PMID: 34575104
2

Association of satellites with a mastrevirus in natural infection: complexity of Wheat dwarf India virus disease.

Kumar J, et al.  J Virol. 2014 Jun;88(12):7093-104. doi: 10.1128/JVI.02911-13. Epub 2014 Apr 9.

PMID: 24719407
3

A novel mastrevirus infecting wheat in India.

Kumar J, et al.  Arch Virol. 2012 Oct;157(10):2031-4. doi: 10.1007/s00705-012-1359-y. Epub 2012 Jul 3.

PMID: 22752839
4

βC1 is a pathogenicity determinant: not only for begomoviruses but also for a mastrevirus.

Kumar J, et al.  Arch Virol. 2014 Nov;159(11):3071-6. doi: 10.1007/s00705-014-2149-5. Epub 2014 Jul 8.

PMID: 25000899
5

A geminivirus crosses the monocot-dicot boundary and acts as a viral vector for gene silencing and genome editing.

Kumar J, et al.  J Adv Res. 2023 Sep 18:S2090-1232(23)00262-X. doi: 10.1016/j.jare.2023.09.013. Online ahead of print.

PMID: 37730118
6

First Report of Sugarcane mosaic virus Infecting Maize in Poland.

Trzmiel K.  Plant Dis. 2009 Oct;93(10):1078. doi: 10.1094/PDIS-93-10-1078B.

PMID: 30754365
7

Purification, properties, and diagnosis of banana bract mosaic potyvirus and its distinction from abaca mosaic potyvirus.

Thomas JE, et al.  Phytopathology. 1997 Jul;87(7):698-705. doi: 10.1094/PHYTO.1997.87.7.698.

PMID: 18945091