Tobacco yellow dwarf virus
Basic Information
| Genus | Mastrevirus |
|---|---|
| NCBI Assembly | GCF_000840085.1 |
| Release date | 2015/2/12 |
| Submitter | Morris,B.A., Richardson,K.A., Haley,A., Zhan,X., Thomas,J.E. |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_003822
Gene Information
| NCBI Accession | NP_620724.1 |
|---|---|
| Location | 269-577 |
| Gene Name | V1 |
| Protein Name | movement protein |
| Coding Region | ATGTATCCCGCCAAATACCAAGTGGTCCCATCTGGTATAAATTACTCAGATACCCCTGTTGGTACTTTTGAGCAATATCAGCCGCAGAAAGCGGGTGAGTCATCGGAGCACTTCTTTTCGAAAGTTGTTGTTGCTTTGATTGTTATCCTTTTTGCTGTAGGTATCGTATACTTAGCGTATACGTTATTCTTGAAGGATTTGATCCTTCTTTTGAAAGCAAAGAAGCAGAAGACGACAACTGAGATAGGGTTTGGTAATACCCCTCTCAGAAGACCTGGTGAAGGAAACCCTAATGGCGGGCCGGTATAA |
| Protein Sequence | MYPAKYQVVPSGINYSDTPVGTFEQYQPQKAGESSEHFFSKVVVALIVILFAVGIVYLAYTLFLKDLILLLKAKKQKTTTEIGFGNTPLRRPGEGNPNGGPV |
| NCBI Accession | NP_620725.1 |
|---|---|
| Location | 561-1325 |
| Gene Name | V2 |
| Protein Name | coat protein |
| Coding Region | ATGGCGGGCCGGTATAAGGGTTTGGTTTATTCCCGGAAAAGGGGACGTTATGGCAAGACCTATCAGGCTCTTGGCGTGAAATCACAAAGAGAATTGGAGCAGCTAGTTAACCAACCAGGCCGTCCTGTTTCTAACAGGCGTCCTGCTCTACAGGTCGCAGAGTATCTGTGGACGACGAATAAAACAGGAATGACGTTTTCTCCTGGTGGGTCTACTTTCCTCATCACTAATTTCCCTCAAGGGGCGAACGAGAACTGTAGGCACACCAACCGGACAATTACCTACAAGATGGCTGTGAAGACGTGGGTTGCTTTGGATGGCTCGATGTTCTCTAGGGTTTCAAAATTCCCAATCTATTTCTGGTTGGTGTATGATAAAAACCCTGGCGAGAGTAATCCATCGCCTTCCGCTATTTTTGATAGTCTATATCAAGATCAGCCTGGGACTTGGACTGTGACTCGTAATGTATGTCACAGGTTTGTCGTTAAAAAAACCTGGTCATGTATGTTGGAGTCTAATGGAGTTGACCCTAATGCTAAACAAGGGTCTTCTTACTATGGTCCTGGGCCTTGTTATCAGTGGAGGCATGTTACTAAGTTTTTTAAACGTTTAGGGGTTAGCACAGAGTGGAAGAATTCTTCCACTGGTGATGTTGCTGATATTAAGGAAGGAGCACTATACCTTGTATGTGCTCCTGGTGGTGGTGCTACTGTAAGAGTTGGCGGTAGATTCCGCATGTATTTCAAATCAGTTGGCAATCAATAA |
| Protein Sequence | MAGRYKGLVYSRKRGRYGKTYQALGVKSQRELEQLVNQPGRPVSNRRPALQVAEYLWTTNKTGMTFSPGGSTFLITNFPQGANENCRHTNRTITYKMAVKTWVALDGSMFSRVSKFPIYFWLVYDKNPGESNPSPSAIFDSLYQDQPGTWTVTRNVCHRFVVKKTWSCMLESNGVDPNAKQGSSYYGPGPCYQWRHVTKFFKRLGVSTEWKNSSTGDVADIKEGALYLVCAPGGGATVRVGGRFRMYFKSVGNQ |
| NCBI Accession | NP_620726.1 |
|---|---|
| Location | 1481-1894,1981-2580 |
| Gene Name | C2 |
| Protein Name | polymerase |
| Coding Region | ATGCCTTCAGCCCCCCAGAAAACCAAATCCTTCAGACTCCAAACCAAATATGTCTTCCTTACTTATCCACGCTGCAGCTCTAGTGCAGAAAATCTCAGAGATTTCCTCTGGGATAAACTTTCACGTTTTGCTATTTTCTTTATCGCTATTGCTACTGAACTCCACCAGGATGGTACTCCCCATCTTCACTGCCTTATACAGCTTGACAAAAGAAGCAATATACGTGACCCTTCTTTTTTTGATCTTGAAGGAAACCATCCAAATATCCAACCAGCTAAAAACTCTGAACAAGTTCTTGAATACATCTCCAAAGACGGAAACGTCATCACCAAAGGAGAGTTCAAGAAACACAGAGTCTCCCCTTCCAAATCTGATGAGCGATGGCGAACTATTATCCAGACTGCGACTTCTAAAGAGGAATATCTGGACATGATAAAGGATGAATTTCCTCATGAATGGGCAACAAAATTACAGTGGTTGGAATACTCTGCAAATAAACTATTTCCACCACAACCTGAAATCTACCAGGCCACATTCACTGAGGAAGATCTCCAATGTCATGAAGATCTGCAGTTATGGAGAGACCAGCATCTATACCACGAACCTAGAAGGGCTGGAACCAGGATCCCCTCCCTCTACATCTGCGGACCAAGTCGTACCGGAAAGACAACATGGGCCAGAAGCCTCGGAAGGCACAATTACTGGAATGGGACCATCGACTTCACTGTCTATGATGACCACGCGACCTACAACGTCATCGACGACATCCCCTTCAAATTCGTCCCACTCTGGAAGCAATTAATAGGTTGCCAGTCTGATTTTACTGTCAACCCTAAGTATGGAAAAAAGAAGAAAATAAAGGGAGGAGTGCCATGTATTATACTATGTAACGACGATGAAGACTGGCTGAAGAATATGTCTCCCGCTCAGATTGAATACTTTGAAGCCAATTGTATTACGCATTTTATGTATGCGGCGGAAACATTTTTTGCTCCTGAATCGTCGAGTCACTGA |
| Protein Sequence | MPSAPQKTKSFRLQTKYVFLTYPRCSSSAENLRDFLWDKLSRFAIFFIAIATELHQDGTPHLHCLIQLDKRSNIRDPSFFDLEGNHPNIQPAKNSEQVLEYISKDGNVITKGEFKKHRVSPSKSDERWRTIIQTATSKEEYLDMIKDEFPHEWATKLQWLEYSANKLFPPQPEIYQATFTEEDLQCHEDLQLWRDQHLYHEPRRAGTRIPSLYICGPSRTGKTTWARSLGRHNYWNGTIDFTVYDDHATYNVIDDIPFKFVPLWKQLIGCQSDFTVNPKYGKKKKIKGGVPCIILCNDDEDWLKNMSPAQIEYFEANCITHFMYAAETFFAPESSSH |
| NCBI Accession | NP_620727.1 |
|---|---|
| Location | 1693-2580 |
| Gene Name | C1 |
| Protein Name | replication-associated protein |
| Coding Region | ATGCCTTCAGCCCCCCAGAAAACCAAATCCTTCAGACTCCAAACCAAATATGTCTTCCTTACTTATCCACGCTGCAGCTCTAGTGCAGAAAATCTCAGAGATTTCCTCTGGGATAAACTTTCACGTTTTGCTATTTTCTTTATCGCTATTGCTACTGAACTCCACCAGGATGGTACTCCCCATCTTCACTGCCTTATACAGCTTGACAAAAGAAGCAATATACGTGACCCTTCTTTTTTTGATCTTGAAGGAAACCATCCAAATATCCAACCAGCTAAAAACTCTGAACAAGTTCTTGAATACATCTCCAAAGACGGAAACGTCATCACCAAAGGAGAGTTCAAGAAACACAGAGTCTCCCCTTCCAAATCTGATGAGCGATGGCGAACTATTATCCAGACTGCGACTTCTAAAGAGGAATATCTGGACATGATAAAGGATGAATTTCCTCATGAATGGGCAACAAAATTACAGTGGTTGGAATACTCTGCAAATAAACTATTTCCACCACAACCTGAAATCTACCAGGCCACATTCACTGAGGAAGATCTCCAATGTCATGAAGATCTGCAGTTATGGAGAGACCAGCATCTATACCACGTAAGTGTAGATGCTTACCGTCTAGTTCATAACGTCACACTTGTTGAAGCACACTCTGACTTAGTTTGGATGGACGACATATCCAGGAACCTAGAAGGGCTGGAACCAGGATCCCCTCCCTCTACATCTGCGGACCAAGTCGTACCGGAAAGACAACATGGGCCAGAAGCCTCGGAAGGCACAATTACTGGAATGGGACCATCGACTTCACTGTCTATGATGACCACGCGACCTACAACGTCATCGACGACATCCCCTTCAAATTCGTCCCACTCTGGAAGCAATTAA |
| Protein Sequence | MPSAPQKTKSFRLQTKYVFLTYPRCSSSAENLRDFLWDKLSRFAIFFIAIATELHQDGTPHLHCLIQLDKRSNIRDPSFFDLEGNHPNIQPAKNSEQVLEYISKDGNVITKGEFKKHRVSPSKSDERWRTIIQTATSKEEYLDMIKDEFPHEWATKLQWLEYSANKLFPPQPEIYQATFTEEDLQCHEDLQLWRDQHLYHVSVDAYRLVHNVTLVEAHSDLVWMDDISRNLEGLEPGSPPSTSADQVVPERQHGPEASEGTITGMGPSTSLSMMTTRPTTSSTTSPSNSSHSGSN |
References More References in PubMed
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