Sweet potato symptomless virus 1

Basic Information

Genus Mastrevirus
NCBI Assembly GCF_002158695.1
Isolate Taiwan
Release date 2017/5/28
Submitter Cao,M., Lan,P., Li,F., Abad,J., Zhou,C., Li,R.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_034630
ATGAATTCATCTGTCCCTATCTTTGATCCCTTTCCGGTATATTCTCCGACGAACCCTAAGTCGTCGTCCGATAGTCGTTTAAATTCGTTAATTACAGTTATTGTTGTGACTCTGTTATTTGTTGGTATTGTATACCTAGCTTATGTGCTGTTTTTGAAAGATGTGATTTTGCTGTTGAAGGCGAAACGACAGAGAACGACGACGGAGATAGGGTTCGGTCAGACCCCTAGGGTGAATACACAAGGTGGAGGCGTGGGATAATTACAAGTATAACCGGTGGTTGGAAATCATGTCTACGAGGGGTAAGCGGATTGTTACCTACAAGCGAGATCCGGAAAGGCAGAAACGCCAGAGAATAAAAAAAGCTCTGGGCGTTTCTACCTGGGATGATGTGGCTAGACTTGCAGCCACACCTGCAATATCACTACGAGATCGACCGAGTCTGCAGGTAGCTCAGTTTACCTGGACTCAAAATAAAGTGCCTGTTGTGTTCAACCCAGGGGGTACCGTGTATTTGATGACGATGTACCCCTTTGGGGGATCTGAGGCTCAGAGACATGCTAATACGACCATGACGTACAAGATGTCAATTGGCCAGGAAGTGCAACTTGATAAGGCTTTCTATGCGAGTTGTGGCATGTACTATATGCAGTGGTGGTTAGTTTACGATAAGGCGTCAACGGGTACGCTGCCAGCGACCTCAACCATTTTCGATACGTTCTACCAGAACTTCCCAAATACGTGGACTGTTGCAAGAGATGTGTGTCACAGATTCATAGTAAAAAGAAAATGGAAGACGATTCTGACGTCGAATGGTGTGGATATTGGTAAACCTGGTCAGATCTGCGCTCCGGCCAAACAACGTGTGGGTGTTAATAAGTTCTTTAAAAAACTCGGTGTAAAAACCGAGTGGAAGAACAGCAGTACCGGTGACATAGGAGATATAAAATCTGGTGCATTATACCTGATAGGTGCGCCAAGTCATGGAGTTGTTTGTAATGTATACGGCAGATTTAGGGTATACTTTAAGTCTGTCGGAAATCAATGATATTTTATTTTAATAAAATTTTACTCCCTCCGTCCCTAATTGTTTGTCTCATTTACTTTTTGCACGGTTTTTAATACAACACAACAAATGATACTCACTTTCCAATTTTGCCCTTCAAAAGTAGGTGTTATTTGTACAAAGTACAATTGTACATTTGTACTTATCTCATTAATGGTCTAAAAAGTTGAAAAGTCAAAAGGGTAAATTGGGAAATGTAAAATGATAGTTATGTTTAATTTTAGAAAGTGGACACTATTTTGGGACAAGCTAAAAAGGAAAGTAAGACAAGTAAAATGGGACGGAGGGAGTATGTTGTTTGAGTATGAAGCGTCGCGTAATGTATGAGAAGTGTCGCCGAAAAACCCATGCCGAGAGAACTTATGCAATAAAACACGAAAAACGCTTGAGTTTATTAATATACTTAGGCCGAAGGCCTAATAAATGTCTCCGTAGGAGACATATAATGGACAGTACAATTGGCTAAGAAATATGATTTCTGGTCTGGTGACATATCGCGAAGCCAATCTTCGTCTTGATTAACTAGTATTATACATGGTATACCCCCTGGGATGACCTTCTTCTTGCCGTATTTGGGGTTGACTGTGAAATCCTTCTGGCCGCCGATCAATTGCTTCCAGCTTGGGAAGAATTTGAATGGGATGTCGTCGGCGATGTTGTATGTGGCATGACAGTCGTACGTGGAGAAGTCAACCCCACCGTTCCAGTAGTTGTGCCGCCCGAGTTGTCTTGCCCAGGTTGTCTTTGCTGTGCGGGTGGGACCACATATGTAGAGGGACCTGGGTCTTCGGAGGGCTCTTTCACTGGGTTCCTAGCAAGATCATCCAGCCATTCAAGATCTTGTCTTGCAGTATCATAAGAACAATTATGTATGAGGATATAGTCTTCGAGGTGTACCAGGTATAGTTCACGATTGATCCAGTCCTGGATGTCCTCATGGCACTGCAAGGTGAGAGGATCGAAAGGGGAAACATATGGGGGGGCAGTTGAAGGGAATAGCCTTTCAGCAAAATATTCCAGTTGTTGCAGACGAGTTGCGTAGTCTGCGGGGAATTCCTGCTTCACTCGGTTAAGGTACTCCGCCTTAGACGTCGACGTAAAGATGATATCTCTCCATCGGTCATCCCTTCGTGAAGGCGATACTTTATGATTCTGGAATTCCCCCCAGACGATAGGAGGTTGTTCCTTTGATATGTATTCAAGGACTGCTGCAGAGTCACGAGCAGGTTGTATGTTTGGATGGTAATTATTAAGATCAAAGAAATCGACCCGACGAGTGATAATCCGACGAGCACATTGAAAGAGAACGTGAAAATGGAGGGAACCATCCTGATGATGTTCAGGAGCAACAGCGAGAAAGAGAAGATTAAAAGGTGTGAGGAGAGTGATAAGCATTTGCTGAATGATCTCAGCTGTGAGATCACATTGAGAGTAGGTGAGAAAACCATATTTGGAACTGAATGAGAAAACTGATCTTGCTCTGGGTTGACGAGGCATGATGTATTTGTAGAGGGGAGGTAACGTGCACTCTGAAAAACTCTATCCTATATACTCAAATGTAACACCCCTATTTATAGGGGTGGGCCTTGTGCCGAATTGGGCCTCGTGGCTGGGTAATAAGATTCCCCCAGCCACGAGGGCCACTTCGGCGGGAATTTTCCCGCCGAAAAAATTAAAAGAAGGGCAAAATAGTCATTTGCCAATGTGAACGCGTTCAAAGTAAAGTTGACGTTGACGTTTGTGTTACGTGTTAAAGTATTTCTTTTTAAAAAGGAAGATAAGACGTCGTCATCTTATCTTATCAGAAGATGACATGACTG

Gene Information

NCBI Accession YP_009362980.1
Location 1-261
Gene Name V1
Protein Name movement protein
Coding Region ATGAATTCATCTGTCCCTATCTTTGATCCCTTTCCGGTATATTCTCCGACGAACCCTAAGTCGTCGTCCGATAGTCGTTTAAATTCGTTAATTACAGTTATTGTTGTGACTCTGTTATTTGTTGGTATTGTATACCTAGCTTATGTGCTGTTTTTGAAAGATGTGATTTTGCTGTTGAAGGCGAAACGACAGAGAACGACGACGGAGATAGGGTTCGGTCAGACCCCTAGGGTGAATACACAAGGTGGAGGCGTGGGATAA
Protein Sequence MNSSVPIFDPFPVYSPTNPKSSSDSRLNSLITVIVVTLLFVGIVYLAYVLFLKDVILLLKAKRQRTTTEIGFGQTPRVNTQGGGVG

NCBI Accession YP_009362981.1
Location 290-1048
Gene Name V2
Protein Name coat protein
Coding Region ATGTCTACGAGGGGTAAGCGGATTGTTACCTACAAGCGAGATCCGGAAAGGCAGAAACGCCAGAGAATAAAAAAAGCTCTGGGCGTTTCTACCTGGGATGATGTGGCTAGACTTGCAGCCACACCTGCAATATCACTACGAGATCGACCGAGTCTGCAGGTAGCTCAGTTTACCTGGACTCAAAATAAAGTGCCTGTTGTGTTCAACCCAGGGGGTACCGTGTATTTGATGACGATGTACCCCTTTGGGGGATCTGAGGCTCAGAGACATGCTAATACGACCATGACGTACAAGATGTCAATTGGCCAGGAAGTGCAACTTGATAAGGCTTTCTATGCGAGTTGTGGCATGTACTATATGCAGTGGTGGTTAGTTTACGATAAGGCGTCAACGGGTACGCTGCCAGCGACCTCAACCATTTTCGATACGTTCTACCAGAACTTCCCAAATACGTGGACTGTTGCAAGAGATGTGTGTCACAGATTCATAGTAAAAAGAAAATGGAAGACGATTCTGACGTCGAATGGTGTGGATATTGGTAAACCTGGTCAGATCTGCGCTCCGGCCAAACAACGTGTGGGTGTTAATAAGTTCTTTAAAAAACTCGGTGTAAAAACCGAGTGGAAGAACAGCAGTACCGGTGACATAGGAGATATAAAATCTGGTGCATTATACCTGATAGGTGCGCCAAGTCATGGAGTTGTTTGTAATGTATACGGCAGATTTAGGGTATACTTTAAGTCTGTCGGAAATCAATGA
Protein Sequence MSTRGKRIVTYKRDPERQKRQRIKKALGVSTWDDVARLAATPAISLRDRPSLQVAQFTWTQNKVPVVFNPGGTVYLMTMYPFGGSEAQRHANTTMTYKMSIGQEVQLDKAFYASCGMYYMQWWLVYDKASTGTLPATSTIFDTFYQNFPNTWTVARDVCHRFIVKRKWKTILTSNGVDIGKPGQICAPAKQRVGVNKFFKKLGVKTEWKNSSTGDIGDIKSGALYLIGAPSHGVVCNVYGRFRVYFKSVGNQ

NCBI Accession YP_009362982.1
Location 1470-1877,1964-2563
Gene Name C1/C2
Protein Name replication-associated protein
Coding Region ATGCCTCGTCAACCCAGAGCAAGATCAGTTTTCTCATTCAGTTCCAAATATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGAAGCAGGAATTCCCCGCAGACTACGCAACTCGTCTGCAACAACTGGAATATTTTGCTGAAAGGCTATTCCCTTCAACTGCCCCCCCATATGTTTCCCCTTTCGATCCTCTCACCTTGCAGTGCCATGAGGACATCCAGGACTGGATCAATCGTGAACTATACCTGGAACCCAGTGAAAGAGCCCTCCGAAGACCCAGGTCCCTCTACATATGTGGTCCCACCCGCACAGCAAAGACAACCTGGGCAAGACAACTCGGGCGGCACAACTACTGGAACGGTGGGGTTGACTTCTCCACGTACGACTGTCATGCCACATACAACATCGCCGACGACATCCCATTCAAATTCTTCCCAAGCTGGAAGCAATTGATCGGCGGCCAGAAGGATTTCACAGTCAACCCCAAATACGGCAAGAAGAAGGTCATCCCAGGGGGTATACCATGTATAATACTAGTTAATCAAGACGAAGATTGGCTTCGCGATATGTCACCAGACCAGAAATCATATTTCTTAGCCAATTGTACTGTCCATTATATGTCTCCTACGGAGACATTTATTAGGCCTTCGGCCTAA
Protein Sequence MPRQPRARSVFSFSSKYGFLTYSQCDLTAEIIQQMLITLLTPFNLLFLAVAPEHHQDGSLHFHVLFQCARRIITRRVDFFDLNNYHPNIQPARDSAAVLEYISKEQPPIVWGEFQNHKVSPSRRDDRWRDIIFTSTSKAEYLNRVKQEFPADYATRLQQLEYFAERLFPSTAPPYVSPFDPLTLQCHEDIQDWINRELYLEPSERALRRPRSLYICGPTRTAKTTWARQLGRHNYWNGGVDFSTYDCHATYNIADDIPFKFFPSWKQLIGGQKDFTVNPKYGKKKVIPGGIPCIILVNQDEDWLRDMSPDQKSYFLANCTVHYMSPTETFIRPSA

NCBI Accession YP_009362983.1
Location 1673-2563
Gene Name C1
Protein Name replication-associated protein A
Coding Region ATGCCTCGTCAACCCAGAGCAAGATCAGTTTTCTCATTCAGTTCCAAATATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGAAGCAGGAATTCCCCGCAGACTACGCAACTCGTCTGCAACAACTGGAATATTTTGCTGAAAGGCTATTCCCTTCAACTGCCCCCCCATATGTTTCCCCTTTCGATCCTCTCACCTTGCAGTGCCATGAGGACATCCAGGACTGGATCAATCGTGAACTATACCTGGTACACCTCGAAGACTATATCCTCATACATAATTGTTCTTATGATACTGCAAGACAAGATCTTGAATGGCTGGATGATCTTGCTAGGAACCCAGTGAAAGAGCCCTCCGAAGACCCAGGTCCCTCTACATATGTGGTCCCACCCGCACAGCAAAGACAACCTGGGCAAGACAACTCGGGCGGCACAACTACTGGAACGGTGGGGTTGACTTCTCCACGTACGACTGTCATGCCACATACAACATCGCCGACGACATCCCATTCAAATTCTTCCCAAGCTGGAAGCAATTGA
Protein Sequence MPRQPRARSVFSFSSKYGFLTYSQCDLTAEIIQQMLITLLTPFNLLFLAVAPEHHQDGSLHFHVLFQCARRIITRRVDFFDLNNYHPNIQPARDSAAVLEYISKEQPPIVWGEFQNHKVSPSRRDDRWRDIIFTSTSKAEYLNRVKQEFPADYATRLQQLEYFAERLFPSTAPPYVSPFDPLTLQCHEDIQDWINRELYLVHLEDYILIHNCSYDTARQDLEWLDDLARNPVKEPSEDPGPSTYVVPPAQQRQPGQDNSGGTTTGTVGLTSPRTTVMPHTTSPTTSHSNSSQAGSN

NCBI Accession YP_009362984.1
Location 2128-2514
Gene Name C3
Protein Name C3 protein
Coding Region ATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGA
Protein Sequence MVFSPTLNVISQLRSFSKCLSLSSHLLIFSFSLLLLNIIRMVPSIFTFSFNVLVGLSLVGSISLILIITIQTYNLLVTLQQSLNTYQRNNLLSSGGNSRIIKYRLHEGMTDGEISSLRRRLRRSTLTE

References More References in PubMed

1

Sweet Potato Symptomless Virus 1: First Detection in Europe and Generation of an Infectious Clone.

Fiallo-Olivé E, et al.  Microorganisms. 2022 Aug 28;10(9):1736. doi: 10.3390/microorganisms10091736.

PMID: 36144338
2

Construction of an Agroinfectious Clone of a Korean Isolate of Sweet Potato Symptomless Virus 1 and Comparison of Its Infectivity According to Agrobacterium tumefaciens Strains in Nicotiana benthamiana.

Ho PT, et al.  Plant Pathol J. 2023 Jun;39(3):255-264. doi: 10.5423/PPJ.OA.12.2022.0168. Epub 2023 Jun 1.

PMID: 37291766
3

Genome characterization of sweet potato symptomless virus 1: a mastrevirus with an unusual nonanucleotide sequence.

Cao M, et al.  Arch Virol. 2017 Sep;162(9):2881-2884. doi: 10.1007/s00705-017-3396-z. Epub 2017 May 11.

PMID: 28497216
4

Virus Incidence of Sweet Potato in Korea from 2011 to 2014.

Kim J, et al.  Plant Pathol J. 2017 Oct;33(5):467-477. doi: 10.5423/PPJ.OA.08.2016.0167. Epub 2017 Oct 1.

PMID: 29018310
5

Distinct cavemoviruses interact synergistically with sweet potato chlorotic stunt virus (genus Crinivirus) in cultivated sweet potato.

Cuellar WJ, et al.  J Gen Virol. 2011 May;92(Pt 5):1233-1243. doi: 10.1099/vir.0.029975-0. Epub 2011 Feb 9.

PMID: 21307225
6

First Report of Sweet potato leaf curl virus in Peru.

Fuentes S, et al.  Plant Dis. 2003 Jan;87(1):98. doi: 10.1094/PDIS.2003.87.1.98C.

PMID: 30812710
7

First Report of Sweet potato leaf curl virus in China.

Luan YS, et al.  Plant Dis. 2006 Aug;90(8):1111. doi: 10.1094/PD-90-1111C.

PMID: 30781325
8

The current incidence of viral disease in korean sweet potatoes and development of multiplex rt-PCR assays for simultaneous detection of eight sweet potato viruses.

Kwak HR, et al.  Plant Pathol J. 2014 Dec;30(4):416-24. doi: 10.5423/PPJ.OA.04.2014.0029. Epub 2014 Dec 15.

PMID: 25506306
9

Key Sweet Potato Viruses in Fujian Province and Their Distribution, Harmfulness, and Implications in China.

Zou W, et al.  Curr Issues Mol Biol. 2025 Apr 1;47(4):242. doi: 10.3390/cimb47040242.

PMID: 40699641
10

First Report of Potato Virus H on Solanum muricatum in China.

Abouelnasr H, et al.  Plant Dis. 2014 Jul;98(7):1016. doi: 10.1094/PDIS-01-14-0024-PDN.

PMID: 30708895