Sweet potato symptomless virus 1
Basic Information
| Genus | Mastrevirus |
|---|---|
| NCBI Assembly | GCF_002158695.1 |
| Isolate | Taiwan |
| Release date | 2017/5/28 |
| Submitter | Cao,M., Lan,P., Li,F., Abad,J., Zhou,C., Li,R. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_034630
Gene Information
| NCBI Accession | YP_009362980.1 |
|---|---|
| Location | 1-261 |
| Gene Name | V1 |
| Protein Name | movement protein |
| Coding Region | ATGAATTCATCTGTCCCTATCTTTGATCCCTTTCCGGTATATTCTCCGACGAACCCTAAGTCGTCGTCCGATAGTCGTTTAAATTCGTTAATTACAGTTATTGTTGTGACTCTGTTATTTGTTGGTATTGTATACCTAGCTTATGTGCTGTTTTTGAAAGATGTGATTTTGCTGTTGAAGGCGAAACGACAGAGAACGACGACGGAGATAGGGTTCGGTCAGACCCCTAGGGTGAATACACAAGGTGGAGGCGTGGGATAA |
| Protein Sequence | MNSSVPIFDPFPVYSPTNPKSSSDSRLNSLITVIVVTLLFVGIVYLAYVLFLKDVILLLKAKRQRTTTEIGFGQTPRVNTQGGGVG |
| NCBI Accession | YP_009362981.1 |
|---|---|
| Location | 290-1048 |
| Gene Name | V2 |
| Protein Name | coat protein |
| Coding Region | ATGTCTACGAGGGGTAAGCGGATTGTTACCTACAAGCGAGATCCGGAAAGGCAGAAACGCCAGAGAATAAAAAAAGCTCTGGGCGTTTCTACCTGGGATGATGTGGCTAGACTTGCAGCCACACCTGCAATATCACTACGAGATCGACCGAGTCTGCAGGTAGCTCAGTTTACCTGGACTCAAAATAAAGTGCCTGTTGTGTTCAACCCAGGGGGTACCGTGTATTTGATGACGATGTACCCCTTTGGGGGATCTGAGGCTCAGAGACATGCTAATACGACCATGACGTACAAGATGTCAATTGGCCAGGAAGTGCAACTTGATAAGGCTTTCTATGCGAGTTGTGGCATGTACTATATGCAGTGGTGGTTAGTTTACGATAAGGCGTCAACGGGTACGCTGCCAGCGACCTCAACCATTTTCGATACGTTCTACCAGAACTTCCCAAATACGTGGACTGTTGCAAGAGATGTGTGTCACAGATTCATAGTAAAAAGAAAATGGAAGACGATTCTGACGTCGAATGGTGTGGATATTGGTAAACCTGGTCAGATCTGCGCTCCGGCCAAACAACGTGTGGGTGTTAATAAGTTCTTTAAAAAACTCGGTGTAAAAACCGAGTGGAAGAACAGCAGTACCGGTGACATAGGAGATATAAAATCTGGTGCATTATACCTGATAGGTGCGCCAAGTCATGGAGTTGTTTGTAATGTATACGGCAGATTTAGGGTATACTTTAAGTCTGTCGGAAATCAATGA |
| Protein Sequence | MSTRGKRIVTYKRDPERQKRQRIKKALGVSTWDDVARLAATPAISLRDRPSLQVAQFTWTQNKVPVVFNPGGTVYLMTMYPFGGSEAQRHANTTMTYKMSIGQEVQLDKAFYASCGMYYMQWWLVYDKASTGTLPATSTIFDTFYQNFPNTWTVARDVCHRFIVKRKWKTILTSNGVDIGKPGQICAPAKQRVGVNKFFKKLGVKTEWKNSSTGDIGDIKSGALYLIGAPSHGVVCNVYGRFRVYFKSVGNQ |
| NCBI Accession | YP_009362982.1 |
|---|---|
| Location | 1470-1877,1964-2563 |
| Gene Name | C1/C2 |
| Protein Name | replication-associated protein |
| Coding Region | ATGCCTCGTCAACCCAGAGCAAGATCAGTTTTCTCATTCAGTTCCAAATATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGAAGCAGGAATTCCCCGCAGACTACGCAACTCGTCTGCAACAACTGGAATATTTTGCTGAAAGGCTATTCCCTTCAACTGCCCCCCCATATGTTTCCCCTTTCGATCCTCTCACCTTGCAGTGCCATGAGGACATCCAGGACTGGATCAATCGTGAACTATACCTGGAACCCAGTGAAAGAGCCCTCCGAAGACCCAGGTCCCTCTACATATGTGGTCCCACCCGCACAGCAAAGACAACCTGGGCAAGACAACTCGGGCGGCACAACTACTGGAACGGTGGGGTTGACTTCTCCACGTACGACTGTCATGCCACATACAACATCGCCGACGACATCCCATTCAAATTCTTCCCAAGCTGGAAGCAATTGATCGGCGGCCAGAAGGATTTCACAGTCAACCCCAAATACGGCAAGAAGAAGGTCATCCCAGGGGGTATACCATGTATAATACTAGTTAATCAAGACGAAGATTGGCTTCGCGATATGTCACCAGACCAGAAATCATATTTCTTAGCCAATTGTACTGTCCATTATATGTCTCCTACGGAGACATTTATTAGGCCTTCGGCCTAA |
| Protein Sequence | MPRQPRARSVFSFSSKYGFLTYSQCDLTAEIIQQMLITLLTPFNLLFLAVAPEHHQDGSLHFHVLFQCARRIITRRVDFFDLNNYHPNIQPARDSAAVLEYISKEQPPIVWGEFQNHKVSPSRRDDRWRDIIFTSTSKAEYLNRVKQEFPADYATRLQQLEYFAERLFPSTAPPYVSPFDPLTLQCHEDIQDWINRELYLEPSERALRRPRSLYICGPTRTAKTTWARQLGRHNYWNGGVDFSTYDCHATYNIADDIPFKFFPSWKQLIGGQKDFTVNPKYGKKKVIPGGIPCIILVNQDEDWLRDMSPDQKSYFLANCTVHYMSPTETFIRPSA |
| NCBI Accession | YP_009362983.1 |
|---|---|
| Location | 1673-2563 |
| Gene Name | C1 |
| Protein Name | replication-associated protein A |
| Coding Region | ATGCCTCGTCAACCCAGAGCAAGATCAGTTTTCTCATTCAGTTCCAAATATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGAAGCAGGAATTCCCCGCAGACTACGCAACTCGTCTGCAACAACTGGAATATTTTGCTGAAAGGCTATTCCCTTCAACTGCCCCCCCATATGTTTCCCCTTTCGATCCTCTCACCTTGCAGTGCCATGAGGACATCCAGGACTGGATCAATCGTGAACTATACCTGGTACACCTCGAAGACTATATCCTCATACATAATTGTTCTTATGATACTGCAAGACAAGATCTTGAATGGCTGGATGATCTTGCTAGGAACCCAGTGAAAGAGCCCTCCGAAGACCCAGGTCCCTCTACATATGTGGTCCCACCCGCACAGCAAAGACAACCTGGGCAAGACAACTCGGGCGGCACAACTACTGGAACGGTGGGGTTGACTTCTCCACGTACGACTGTCATGCCACATACAACATCGCCGACGACATCCCATTCAAATTCTTCCCAAGCTGGAAGCAATTGA |
| Protein Sequence | MPRQPRARSVFSFSSKYGFLTYSQCDLTAEIIQQMLITLLTPFNLLFLAVAPEHHQDGSLHFHVLFQCARRIITRRVDFFDLNNYHPNIQPARDSAAVLEYISKEQPPIVWGEFQNHKVSPSRRDDRWRDIIFTSTSKAEYLNRVKQEFPADYATRLQQLEYFAERLFPSTAPPYVSPFDPLTLQCHEDIQDWINRELYLVHLEDYILIHNCSYDTARQDLEWLDDLARNPVKEPSEDPGPSTYVVPPAQQRQPGQDNSGGTTTGTVGLTSPRTTVMPHTTSPTTSHSNSSQAGSN |
| NCBI Accession | YP_009362984.1 |
|---|---|
| Location | 2128-2514 |
| Gene Name | C3 |
| Protein Name | C3 protein |
| Coding Region | ATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGA |
| Protein Sequence | MVFSPTLNVISQLRSFSKCLSLSSHLLIFSFSLLLLNIIRMVPSIFTFSFNVLVGLSLVGSISLILIITIQTYNLLVTLQQSLNTYQRNNLLSSGGNSRIIKYRLHEGMTDGEISSLRRRLRRSTLTE |
References More References in PubMed
| 1 |
Sweet Potato Symptomless Virus 1: First Detection in Europe and Generation of an Infectious Clone. Fiallo-Olivé E, et al. Microorganisms. 2022 Aug 28;10(9):1736. doi: 10.3390/microorganisms10091736. PMID: 36144338 |
|---|---|
| 2 |
Ho PT, et al. Plant Pathol J. 2023 Jun;39(3):255-264. doi: 10.5423/PPJ.OA.12.2022.0168. Epub 2023 Jun 1. PMID: 37291766 |
| 3 |
Cao M, et al. Arch Virol. 2017 Sep;162(9):2881-2884. doi: 10.1007/s00705-017-3396-z. Epub 2017 May 11. PMID: 28497216 |
| 4 |
First report of sweet potato chlorotic stunt virus infecting sweet potatoes in Hungary. Kiemo FW, et al. Plant Dis. 2021 Aug 25. doi: 10.1094/PDIS-05-21-0944-PDN. Online ahead of print. PMID: 34433315 |
| 5 |
Virus Incidence of Sweet Potato in Korea from 2011 to 2014. Kim J, et al. Plant Pathol J. 2017 Oct;33(5):467-477. doi: 10.5423/PPJ.OA.08.2016.0167. Epub 2017 Oct 1. PMID: 29018310 |
| 6 |
Calystegia hederacea: a new natural host of Sweet potato latent virus in China. Zhao F, et al. Plant Dis. 2022 Mar 12. doi: 10.1094/PDIS-11-21-2613-PDN. Online ahead of print. PMID: 35285258 |
| 7 |
First Report of Sweet Potato Symptomless Virus 1 Infecting Ipomoea batatas in Brazil. Souza CA, et al. Plant Dis. 2018 Aug 10:PDIS01180083PDN. doi: 10.1094/PDIS-01-18-0083-PDN. Online ahead of print. PMID: 30101665 |
| 8 |
First Report of Sweet potato leaf curl virus in Peru. Fuentes S, et al. Plant Dis. 2003 Jan;87(1):98. doi: 10.1094/PDIS.2003.87.1.98C. PMID: 30812710 |
| 9 |
Cuellar WJ, et al. J Gen Virol. 2011 May;92(Pt 5):1233-1243. doi: 10.1099/vir.0.029975-0. Epub 2011 Feb 9. PMID: 21307225 |
| 10 |
First Report of Sweet potato leaf curl virus in China. Luan YS, et al. Plant Dis. 2006 Aug;90(8):1111. doi: 10.1094/PD-90-1111C. PMID: 30781325 |