Sweet potato symptomless virus 1
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_002158695.1 |
| Isolate |
Taiwan |
| Release date |
2017/5/28 |
| Submitter |
Cao,M., Lan,P., Li,F., Abad,J., Zhou,C., Li,R. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ATGAATTCATCTGTCCCTATCTTTGATCCCTTTCCGGTATATTCTCCGACGAACCCTAAGTCGTCGTCCGATAGTCGTTTAAATTCGTTAATTACAGTTATTGTTGTGACTCTGTTATTTGTTGGTATTGTATACCTAGCTTATGTGCTGTTTTTGAAAGATGTGATTTTGCTGTTGAAGGCGAAACGACAGAGAACGACGACGGAGATAGGGTTCGGTCAGACCCCTAGGGTGAATACACAAGGTGGAGGCGTGGGATAATTACAAGTATAACCGGTGGTTGGAAATCATGTCTACGAGGGGTAAGCGGATTGTTACCTACAAGCGAGATCCGGAAAGGCAGAAACGCCAGAGAATAAAAAAAGCTCTGGGCGTTTCTACCTGGGATGATGTGGCTAGACTTGCAGCCACACCTGCAATATCACTACGAGATCGACCGAGTCTGCAGGTAGCTCAGTTTACCTGGACTCAAAATAAAGTGCCTGTTGTGTTCAACCCAGGGGGTACCGTGTATTTGATGACGATGTACCCCTTTGGGGGATCTGAGGCTCAGAGACATGCTAATACGACCATGACGTACAAGATGTCAATTGGCCAGGAAGTGCAACTTGATAAGGCTTTCTATGCGAGTTGTGGCATGTACTATATGCAGTGGTGGTTAGTTTACGATAAGGCGTCAACGGGTACGCTGCCAGCGACCTCAACCATTTTCGATACGTTCTACCAGAACTTCCCAAATACGTGGACTGTTGCAAGAGATGTGTGTCACAGATTCATAGTAAAAAGAAAATGGAAGACGATTCTGACGTCGAATGGTGTGGATATTGGTAAACCTGGTCAGATCTGCGCTCCGGCCAAACAACGTGTGGGTGTTAATAAGTTCTTTAAAAAACTCGGTGTAAAAACCGAGTGGAAGAACAGCAGTACCGGTGACATAGGAGATATAAAATCTGGTGCATTATACCTGATAGGTGCGCCAAGTCATGGAGTTGTTTGTAATGTATACGGCAGATTTAGGGTATACTTTAAGTCTGTCGGAAATCAATGATATTTTATTTTAATAAAATTTTACTCCCTCCGTCCCTAATTGTTTGTCTCATTTACTTTTTGCACGGTTTTTAATACAACACAACAAATGATACTCACTTTCCAATTTTGCCCTTCAAAAGTAGGTGTTATTTGTACAAAGTACAATTGTACATTTGTACTTATCTCATTAATGGTCTAAAAAGTTGAAAAGTCAAAAGGGTAAATTGGGAAATGTAAAATGATAGTTATGTTTAATTTTAGAAAGTGGACACTATTTTGGGACAAGCTAAAAAGGAAAGTAAGACAAGTAAAATGGGACGGAGGGAGTATGTTGTTTGAGTATGAAGCGTCGCGTAATGTATGAGAAGTGTCGCCGAAAAACCCATGCCGAGAGAACTTATGCAATAAAACACGAAAAACGCTTGAGTTTATTAATATACTTAGGCCGAAGGCCTAATAAATGTCTCCGTAGGAGACATATAATGGACAGTACAATTGGCTAAGAAATATGATTTCTGGTCTGGTGACATATCGCGAAGCCAATCTTCGTCTTGATTAACTAGTATTATACATGGTATACCCCCTGGGATGACCTTCTTCTTGCCGTATTTGGGGTTGACTGTGAAATCCTTCTGGCCGCCGATCAATTGCTTCCAGCTTGGGAAGAATTTGAATGGGATGTCGTCGGCGATGTTGTATGTGGCATGACAGTCGTACGTGGAGAAGTCAACCCCACCGTTCCAGTAGTTGTGCCGCCCGAGTTGTCTTGCCCAGGTTGTCTTTGCTGTGCGGGTGGGACCACATATGTAGAGGGACCTGGGTCTTCGGAGGGCTCTTTCACTGGGTTCCTAGCAAGATCATCCAGCCATTCAAGATCTTGTCTTGCAGTATCATAAGAACAATTATGTATGAGGATATAGTCTTCGAGGTGTACCAGGTATAGTTCACGATTGATCCAGTCCTGGATGTCCTCATGGCACTGCAAGGTGAGAGGATCGAAAGGGGAAACATATGGGGGGGCAGTTGAAGGGAATAGCCTTTCAGCAAAATATTCCAGTTGTTGCAGACGAGTTGCGTAGTCTGCGGGGAATTCCTGCTTCACTCGGTTAAGGTACTCCGCCTTAGACGTCGACGTAAAGATGATATCTCTCCATCGGTCATCCCTTCGTGAAGGCGATACTTTATGATTCTGGAATTCCCCCCAGACGATAGGAGGTTGTTCCTTTGATATGTATTCAAGGACTGCTGCAGAGTCACGAGCAGGTTGTATGTTTGGATGGTAATTATTAAGATCAAAGAAATCGACCCGACGAGTGATAATCCGACGAGCACATTGAAAGAGAACGTGAAAATGGAGGGAACCATCCTGATGATGTTCAGGAGCAACAGCGAGAAAGAGAAGATTAAAAGGTGTGAGGAGAGTGATAAGCATTTGCTGAATGATCTCAGCTGTGAGATCACATTGAGAGTAGGTGAGAAAACCATATTTGGAACTGAATGAGAAAACTGATCTTGCTCTGGGTTGACGAGGCATGATGTATTTGTAGAGGGGAGGTAACGTGCACTCTGAAAAACTCTATCCTATATACTCAAATGTAACACCCCTATTTATAGGGGTGGGCCTTGTGCCGAATTGGGCCTCGTGGCTGGGTAATAAGATTCCCCCAGCCACGAGGGCCACTTCGGCGGGAATTTTCCCGCCGAAAAAATTAAAAGAAGGGCAAAATAGTCATTTGCCAATGTGAACGCGTTCAAAGTAAAGTTGACGTTGACGTTTGTGTTACGTGTTAAAGTATTTCTTTTTAAAAAGGAAGATAAGACGTCGTCATCTTATCTTATCAGAAGATGACATGACTG
Gene Information
|
NCBI Accession
|
YP_009362980.1
|
|
Location
|
1-261 |
|
Gene Name
|
V1 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGAATTCATCTGTCCCTATCTTTGATCCCTTTCCGGTATATTCTCCGACGAACCCTAAGTCGTCGTCCGATAGTCGTTTAAATTCGTTAATTACAGTTATTGTTGTGACTCTGTTATTTGTTGGTATTGTATACCTAGCTTATGTGCTGTTTTTGAAAGATGTGATTTTGCTGTTGAAGGCGAAACGACAGAGAACGACGACGGAGATAGGGTTCGGTCAGACCCCTAGGGTGAATACACAAGGTGGAGGCGTGGGATAA |
|
Protein Sequence
|
MNSSVPIFDPFPVYSPTNPKSSSDSRLNSLITVIVVTLLFVGIVYLAYVLFLKDVILLLKAKRQRTTTEIGFGQTPRVNTQGGGVG |
|
NCBI Accession
|
YP_009362981.1
|
|
Location
|
290-1048 |
|
Gene Name
|
V2 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCTACGAGGGGTAAGCGGATTGTTACCTACAAGCGAGATCCGGAAAGGCAGAAACGCCAGAGAATAAAAAAAGCTCTGGGCGTTTCTACCTGGGATGATGTGGCTAGACTTGCAGCCACACCTGCAATATCACTACGAGATCGACCGAGTCTGCAGGTAGCTCAGTTTACCTGGACTCAAAATAAAGTGCCTGTTGTGTTCAACCCAGGGGGTACCGTGTATTTGATGACGATGTACCCCTTTGGGGGATCTGAGGCTCAGAGACATGCTAATACGACCATGACGTACAAGATGTCAATTGGCCAGGAAGTGCAACTTGATAAGGCTTTCTATGCGAGTTGTGGCATGTACTATATGCAGTGGTGGTTAGTTTACGATAAGGCGTCAACGGGTACGCTGCCAGCGACCTCAACCATTTTCGATACGTTCTACCAGAACTTCCCAAATACGTGGACTGTTGCAAGAGATGTGTGTCACAGATTCATAGTAAAAAGAAAATGGAAGACGATTCTGACGTCGAATGGTGTGGATATTGGTAAACCTGGTCAGATCTGCGCTCCGGCCAAACAACGTGTGGGTGTTAATAAGTTCTTTAAAAAACTCGGTGTAAAAACCGAGTGGAAGAACAGCAGTACCGGTGACATAGGAGATATAAAATCTGGTGCATTATACCTGATAGGTGCGCCAAGTCATGGAGTTGTTTGTAATGTATACGGCAGATTTAGGGTATACTTTAAGTCTGTCGGAAATCAATGA |
|
Protein Sequence
|
MSTRGKRIVTYKRDPERQKRQRIKKALGVSTWDDVARLAATPAISLRDRPSLQVAQFTWTQNKVPVVFNPGGTVYLMTMYPFGGSEAQRHANTTMTYKMSIGQEVQLDKAFYASCGMYYMQWWLVYDKASTGTLPATSTIFDTFYQNFPNTWTVARDVCHRFIVKRKWKTILTSNGVDIGKPGQICAPAKQRVGVNKFFKKLGVKTEWKNSSTGDIGDIKSGALYLIGAPSHGVVCNVYGRFRVYFKSVGNQ |
|
NCBI Accession
|
YP_009362982.1
|
|
Location
|
1470-1877,1964-2563 |
|
Gene Name
|
C1/C2 |
|
Protein Name
|
replication-associated protein |
|
Coding Region
|
ATGCCTCGTCAACCCAGAGCAAGATCAGTTTTCTCATTCAGTTCCAAATATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGAAGCAGGAATTCCCCGCAGACTACGCAACTCGTCTGCAACAACTGGAATATTTTGCTGAAAGGCTATTCCCTTCAACTGCCCCCCCATATGTTTCCCCTTTCGATCCTCTCACCTTGCAGTGCCATGAGGACATCCAGGACTGGATCAATCGTGAACTATACCTGGAACCCAGTGAAAGAGCCCTCCGAAGACCCAGGTCCCTCTACATATGTGGTCCCACCCGCACAGCAAAGACAACCTGGGCAAGACAACTCGGGCGGCACAACTACTGGAACGGTGGGGTTGACTTCTCCACGTACGACTGTCATGCCACATACAACATCGCCGACGACATCCCATTCAAATTCTTCCCAAGCTGGAAGCAATTGATCGGCGGCCAGAAGGATTTCACAGTCAACCCCAAATACGGCAAGAAGAAGGTCATCCCAGGGGGTATACCATGTATAATACTAGTTAATCAAGACGAAGATTGGCTTCGCGATATGTCACCAGACCAGAAATCATATTTCTTAGCCAATTGTACTGTCCATTATATGTCTCCTACGGAGACATTTATTAGGCCTTCGGCCTAA |
|
Protein Sequence
|
MPRQPRARSVFSFSSKYGFLTYSQCDLTAEIIQQMLITLLTPFNLLFLAVAPEHHQDGSLHFHVLFQCARRIITRRVDFFDLNNYHPNIQPARDSAAVLEYISKEQPPIVWGEFQNHKVSPSRRDDRWRDIIFTSTSKAEYLNRVKQEFPADYATRLQQLEYFAERLFPSTAPPYVSPFDPLTLQCHEDIQDWINRELYLEPSERALRRPRSLYICGPTRTAKTTWARQLGRHNYWNGGVDFSTYDCHATYNIADDIPFKFFPSWKQLIGGQKDFTVNPKYGKKKVIPGGIPCIILVNQDEDWLRDMSPDQKSYFLANCTVHYMSPTETFIRPSA |
|
NCBI Accession
|
YP_009362983.1
|
|
Location
|
1673-2563 |
|
Gene Name
|
C1 |
|
Protein Name
|
replication-associated protein A |
|
Coding Region
|
ATGCCTCGTCAACCCAGAGCAAGATCAGTTTTCTCATTCAGTTCCAAATATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGAAGCAGGAATTCCCCGCAGACTACGCAACTCGTCTGCAACAACTGGAATATTTTGCTGAAAGGCTATTCCCTTCAACTGCCCCCCCATATGTTTCCCCTTTCGATCCTCTCACCTTGCAGTGCCATGAGGACATCCAGGACTGGATCAATCGTGAACTATACCTGGTACACCTCGAAGACTATATCCTCATACATAATTGTTCTTATGATACTGCAAGACAAGATCTTGAATGGCTGGATGATCTTGCTAGGAACCCAGTGAAAGAGCCCTCCGAAGACCCAGGTCCCTCTACATATGTGGTCCCACCCGCACAGCAAAGACAACCTGGGCAAGACAACTCGGGCGGCACAACTACTGGAACGGTGGGGTTGACTTCTCCACGTACGACTGTCATGCCACATACAACATCGCCGACGACATCCCATTCAAATTCTTCCCAAGCTGGAAGCAATTGA |
|
Protein Sequence
|
MPRQPRARSVFSFSSKYGFLTYSQCDLTAEIIQQMLITLLTPFNLLFLAVAPEHHQDGSLHFHVLFQCARRIITRRVDFFDLNNYHPNIQPARDSAAVLEYISKEQPPIVWGEFQNHKVSPSRRDDRWRDIIFTSTSKAEYLNRVKQEFPADYATRLQQLEYFAERLFPSTAPPYVSPFDPLTLQCHEDIQDWINRELYLVHLEDYILIHNCSYDTARQDLEWLDDLARNPVKEPSEDPGPSTYVVPPAQQRQPGQDNSGGTTTGTVGLTSPRTTVMPHTTSPTTSHSNSSQAGSN |
|
NCBI Accession
|
YP_009362984.1
|
|
Location
|
2128-2514 |
|
Gene Name
|
C3 |
|
Protein Name
|
C3 protein |
|
Coding Region
|
ATGGTTTTCTCACCTACTCTCAATGTGATCTCACAGCTGAGATCATTCAGCAAATGCTTATCACTCTCCTCACACCTTTTAATCTTCTCTTTCTCGCTGTTGCTCCTGAACATCATCAGGATGGTTCCCTCCATTTTCACGTTCTCTTTCAATGTGCTCGTCGGATTATCACTCGTCGGGTCGATTTCTTTGATCTTAATAATTACCATCCAAACATACAACCTGCTCGTGACTCTGCAGCAGTCCTTGAATACATATCAAAGGAACAACCTCCTATCGTCTGGGGGGAATTCCAGAATCATAAAGTATCGCCTTCACGAAGGGATGACCGATGGAGAGATATCATCTTTACGTCGACGTCTAAGGCGGAGTACCTTAACCGAGTGA |
|
Protein Sequence
|
MVFSPTLNVISQLRSFSKCLSLSSHLLIFSFSLLLLNIIRMVPSIFTFSFNVLVGLSLVGSISLILIITIQTYNLLVTLQQSLNTYQRNNLLSSGGNSRIIKYRLHEGMTDGEISSLRRRLRRSTLTE |