Genus | Mastrevirus |
---|---|
NCBI Assembly | GCF_000919135.1 |
Isolate | Sudan |
Release date | 2015/2/22 |
Submitter | Candresse,T., Filloux,D., Muhire,B., Julian,C., Galzi,S., Fort,G., Bernardo,P., Daugrois,J.H., Fernandez,E., Martin,D.P., Varsani,A., Roumagnac,P. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009026386.1 |
---|---|
Location | 180-473 |
Protein Name | movement protein |
Coding Region | ATGGCGCATCATATGAAGCTTTTACAGGTATCACCAACTGTTGTGTATACCCCATCTCCTCGTCCACCGTCGACAGACGGTGATTCGTGGTCCCATCTGATCTTCGCTCTCGTAGTGACTATTTGTGTAGTCCTCACAATTTACGTGGTTTATCGTTGGTTTGGCAGGGATTTAATAATCCTATTCCGTGCCAGAAGACAGAGATCCACGGAGGAGATCGGATTTGGTAATACGCCGGTAAATCCACGTGCTGGACCGGGTGTTCAGGTCGTGGGCGGAGCAATCCCAGGATAA |
Protein Sequence | MAHHMKLLQVSPTVVYTPSPRPPSTDGDSWSHLIFALVVTICVVLTIYVVYRWFGRDLIILFRARRQRSTEEIGFGNTPVNPRAGPGVQVVGGAIPG |
NCBI Accession | YP_009026387.1 |
---|---|
Location | 523-1290 |
Protein Name | capsid protein |
Coding Region | ATGGCTGGACCGATGCGTAGAAAACCTGCTAGGTCTTCACGCAGGATTGTACCGTGGCCTGCTGAGGCGCTGCGTCGGGGTTATACCCCGAGGAATTCAGTACTTCGGGGTACTCGTTCCGGCCGGTCTGATCGCAGACCATCTCTACAGGTGATAAACTACAGGTGGTCGGGTCAGTCAGCACCAATATTTAAAACCGGAGGGGCGACATATTTATCGTCGACCTTTGCCAGAGGCAATGGAGAAGACCAAAGACGGGGAGCGGAAACGATCATATACAAGATAGCGTTCAAGCTCGTGTTTGCTGTGACCTCGTCGCAGTTAAAATACGTATCACGTGGGATGTGCGTCCTTTGGTTGGTCTACGACGCACAGCCTACTGGGATTAAACCGGAACCGAAGGATATCTTCGACTACGATACGGGGTTATCGCAATCTCCTATGACTTGGTCTGTACAGAGAGCGCTGTGCAACAGATTCGTCGTCAAAAGACGATGGAAGTTCGAGCTATCGGTGAATGGTGTATCTGCGGCTGATGACTCTAGTGATGCACAGCTTAGCGGGAAGACAATTCCCTATTCCCGGAGGGGTTTTGACAAGTTCTGTAAGCGTCTTGCAACGCGTACAGAATGGAAAAACACCGAAGGGGGTGACATAGGCGACATACAGAAGGGGGCATTATATGTAATAGCGGCACCTGGTAACGCGATGGAATTTCAAGCCATCGGAAATATTAGGGTATATTTTAAATCCGTAGGATTGCAGTAG |
Protein Sequence | MAGPMRRKPARSSRRIVPWPAEALRRGYTPRNSVLRGTRSGRSDRRPSLQVINYRWSGQSAPIFKTGGATYLSSTFARGNGEDQRRGAETIIYKIAFKLVFAVTSSQLKYVSRGMCVLWLVYDAQPTGIKPEPKDIFDYDTGLSQSPMTWSVQRALCNRFVVKRRWKFELSVNGVSAADDSSDAQLSGKTIPYSRRGFDKFCKRLATRTEWKNTEGGDIGDIQKGALYVIAAPGNAMEFQAIGNIRVYFKSVGLQ |
NCBI Accession | YP_009026388.1 |
---|---|
Location | 1468-1929,1996-2724 |
Protein Name | replication associated protein |
Coding Region | ATGAGTACGGATAGTAGCAACCAGGGAATAGCCGCTCAGCGACTAAGTCCTGGCTTAGAGGAGTTCACCACTAGTTGGCCTGATCCTAGAGCAGGATCAACTTCCCAGCCAAGAGTCTTTCAATTCAAAGCCCAGAATATTTTTCTTACATATCCAAGGTGCGACATATCTGTAGATGTCGCGGCACGCACTCTCCTTACTCTTTGCCATAGGTTTCAGCCTCTCTACATCTTATGCTCTCAAGAGCATCATGCAGATGGTTCAAACCATCTGCATATCCTTCTTCAGACTGATAAGACCATGTACACTCGAAATCCTCATTACTTCGATATTTGTGGTCACCATCCCAATATACAACCAGCTAAAAGCCCTGACAACGTCCGTGCATACATTCTCAAGGACCCTATCACGTCTTTCGAGGAGGGGTCATTTCAACCACGTGGGTCAAGATCCAATACTTCCGCAATACCACGCTCTGGGAATTCCGGTACCAAGGACTCCCTGATGAGGGACATCATCAATACCTCAACGAGTAAGGACGACTACCTTACTCGTGTGAGGAATACATTCCCATTTGATTGGGCCACACGTTTGCAGCAGTTTGAATACAGTGCATCCAAGTTATTCCCAGAACCGGTCCGTGAATACGTTAATCCATTTCCTCCTTCGGAACCCGACTTATTTTGCAGGGAAATCATTGACAGGTGGGTCTATGACGAACTTGATATGGATATCACCGACGCATTTGACGCCGCACAACGCCGACGGAGCCTGTACATCGTTGGACCTACAAGAACTGGTAAATCTACGTGGGCTAGGAGCCTCGGACGACACAATTACTGGCAACACATGGTGGACTTCACAGCGTATGATACCCTCGCCAAATACAACATTCTCGATGATGTACCCTTCAAATTCTGTCCAAATTGGAAACAACTCGTCGGCTGTCAGAGGGACTTCATCGTCAACCCTAAGTACGCGAAACGCAAAGAGATCCCGGGAGGAATCCCATGCATAATACTTCAGAACCCTGACGATGACTGGCTCCCGGTTCTTAGTCCATCCCAGATGGACTACTTTGTGAACAACTGTGATGTCTACGTGATGAAGCCTGGTGAAAAATTCTTCGGAGGTGATACTCCTGTGCCTGAGGCACAGGAGGATGTCCCTGACGGGACAGGGTCGTCCTAG |
Protein Sequence | MSTDSSNQGIAAQRLSPGLEEFTTSWPDPRAGSTSQPRVFQFKAQNIFLTYPRCDISVDVAARTLLTLCHRFQPLYILCSQEHHADGSNHLHILLQTDKTMYTRNPHYFDICGHHPNIQPAKSPDNVRAYILKDPITSFEEGSFQPRGSRSNTSAIPRSGNSGTKDSLMRDIINTSTSKDDYLTRVRNTFPFDWATRLQQFEYSASKLFPEPVREYVNPFPPSEPDLFCREIIDRWVYDELDMDITDAFDAAQRRRSLYIVGPTRTGKSTWARSLGRHNYWQHMVDFTAYDTLAKYNILDDVPFKFCPNWKQLVGCQRDFIVNPKYAKRKEIPGGIPCIILQNPDDDWLPVLSPSQMDYFVNNCDVYVMKPGEKFFGGDTPVPEAQEDVPDGTGSS |
NCBI Accession | YP_009026389.1 |
---|---|
Location | 1930-2724 |
Protein Name | RepA |
Coding Region | ATGAGTACGGATAGTAGCAACCAGGGAATAGCCGCTCAGCGACTAAGTCCTGGCTTAGAGGAGTTCACCACTAGTTGGCCTGATCCTAGAGCAGGATCAACTTCCCAGCCAAGAGTCTTTCAATTCAAAGCCCAGAATATTTTTCTTACATATCCAAGGTGCGACATATCTGTAGATGTCGCGGCACGCACTCTCCTTACTCTTTGCCATAGGTTTCAGCCTCTCTACATCTTATGCTCTCAAGAGCATCATGCAGATGGTTCAAACCATCTGCATATCCTTCTTCAGACTGATAAGACCATGTACACTCGAAATCCTCATTACTTCGATATTTGTGGTCACCATCCCAATATACAACCAGCTAAAAGCCCTGACAACGTCCGTGCATACATTCTCAAGGACCCTATCACGTCTTTCGAGGAGGGGTCATTTCAACCACGTGGGTCAAGATCCAATACTTCCGCAATACCACGCTCTGGGAATTCCGGTACCAAGGACTCCCTGATGAGGGACATCATCAATACCTCAACGAGTAAGGACGACTACCTTACTCGTGTGAGGAATACATTCCCATTTGATTGGGCCACACGTTTGCAGCAGTTTGAATACAGTGCATCCAAGTTATTCCCAGAACCGGTCCGTGAATACGTTAATCCATTTCCTCCTTCGGAACCCGACTTATTTTGCAGGGAAATCATTGACAGGTGGGTCTATGACGAACTTGATATGGTAAGTTCTGATTCCGGTTCTATTCATTTTCGTTACGCAATATACTTATCACTATATTCATTGTAG |
Protein Sequence | MSTDSSNQGIAAQRLSPGLEEFTTSWPDPRAGSTSQPRVFQFKAQNIFLTYPRCDISVDVAARTLLTLCHRFQPLYILCSQEHHADGSNHLHILLQTDKTMYTRNPHYFDICGHHPNIQPAKSPDNVRAYILKDPITSFEEGSFQPRGSRSNTSAIPRSGNSGTKDSLMRDIINTSTSKDDYLTRVRNTFPFDWATRLQQFEYSASKLFPEPVREYVNPFPPSEPDLFCREIIDRWVYDELDMVSSDSGSIHFRYAIYLSLYSL |
1 |
Maize streak virus: an old and complex 'emerging' pathogen. Shepherd DN, et al. Mol Plant Pathol. 2010 Jan;11(1):1-12. doi: 10.1111/j.1364-3703.2009.00568.x. PMID: 20078771 |
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2 |
Boukari W, et al. Virol J. 2017 Jul 28;14(1):146. doi: 10.1186/s12985-017-0810-9. PMID: 28754134 |
3 |
Candresse T, et al. PLoS One. 2014 Jul 25;9(7):e102945. doi: 10.1371/journal.pone.0102945. eCollection 2014. PMID: 25061967 |
4 |
Thomas JE, et al. Phytopathology. 1997 Jul;87(7):698-705. doi: 10.1094/PHYTO.1997.87.7.698. PMID: 18945091 |