Rice latent virus 2
Basic Information
| Genus | Mastrevirus |
|---|---|
| NCBI Assembly | GCF_004130535.1 |
| Isolate | Australia |
| Release date | 2019/2/12 |
| Submitter | Kraberger,S., Geering,A.D.W., Walters,M., Martin,D.P., Varsani,A. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_040537
Gene Information
| NCBI Accession | YP_009551798.1 |
|---|---|
| Location | 1-297 |
| Protein Name | movement protein |
| Coding Region | ATGTGGATGGAAAGCGGACACCTACCGCAGGTAGGGTATCAGGTGCAACCTTCTCCGCCGGCCGTAACCTCGACGTTCGTTGGAAACGACGGCGCCTGGAGGTTTCTCGTTTTATTGACCGCTTGTTCTTGCCTAGCAGGGGCAGCCGTATTCGCATGCTGGCGCATGTGTGGTAAGGACTTGCTCCTGACCTTGAAGGCGAAGCGTAGCAGGACGATAACCGAGCTAGGTTTCGGCCAGACGCCTGAACAGCGTCGAGCTGGAACGAGTTCTCAACCAGTGGGCGTCATCGGCTAA |
| Protein Sequence | MWMESGHLPQVGYQVQPSPPAVTSTFVGNDGAWRFLVLLTACSCLAGAAVFACWRMCGKDLLLTLKAKRSRTITELGFGQTPEQRRAGTSSQPVGVIG |
| NCBI Accession | YP_009551799.1 |
|---|---|
| Location | 365-1063 |
| Protein Name | capsid protein |
| Coding Region | ATGCCGGCGAGGACTGGTAGCGCTCGTCGTAAACGGAAGGATGATTGGGCGTGGGATTCGGCCACTCGTCGCCGTGTTCGTCCGAGGACGTCTTATGTTCCCCGTGGTGGTCCGCGAGTTCGCAGGCCTAGCCTGCAGTATGTGAATCCGGGGTTACTTGGTTCCACCGCGGTACATGTGGCTGATACGAATGGGGAGGTTAGAATTATAACAGGATACTCGCGCGGGAGCGACGAGCAGTCGCGTCATACCAACGAGACTATAACGTACAAGTTATCACTGGACCTCTATGTCACGGTGGACACAGAGTGCCAGAAATATGTTGGTAAAGGCGTTGCGGTCGCATGGTTGGTCTACGATGCGCAGCCTACAGGAGAGATGCCGGCAGCATCGACAATATTCCCCCATGTTGCGGATATGGCTACTGCGCCCTGTACCTGGAAGGTGGGTAGGGAGGTCTGCCATCGTTTCGTGGTTAAGCGTAGATGGGTGATCACGCTTGAGACTAACGGGCGTGTAGCCGGTACGGTCTTTCAGGGTGCTAATGGTGTCCCACCATGTAATCGCACGGTGTACTTCCATAAGTTCTGCAAGAGACTCGGTGTCAGAACTGAGTGGAAGAACACCTCCGGTGGTTCGATCGGAGACATTAAGACGGGTGCCCCTGTACATAGTGTTCGCGGCAGGGAACCAGATTAA |
| Protein Sequence | MPARTGSARRKRKDDWAWDSATRRRVRPRTSYVPRGGPRVRRPSLQYVNPGLLGSTAVHVADTNGEVRIITGYSRGSDEQSRHTNETITYKLSLDLYVTVDTECQKYVGKGVAVAWLVYDAQPTGEMPAASTIFPHVADMATAPCTWKVGREVCHRFVVKRRWVITLETNGRVAGTVFQGANGVPPCNRTVYFHKFCKRLGVRTEWKNTSGGSIGDIKTGAPVHSVRGREPD |
| NCBI Accession | YP_009551800.1 |
|---|---|
| Location | 1290-1700,1778-2515 |
| Protein Name | Rep |
| Coding Region | ATGACCAACACTGAATCCGCATCTGAGCAACCACATAACTTTGCCTTCCAGAACAAAAATGTCTTCCTCACTTATCCACGATGTAGCCAAGAGCCTCATACAATGGGCTTATTCCTCTGGAATCTGCTCAGGCCTTACGGCGTTTTATGTGCTTCTGAGCTTCATAAAGATGGGACTCCCCATCTCCATGCTCTTGCTCAGACTCGTCATCGCATTCGCACACATGACTCAAGTTTTTTTGATAATATGGATTATCATCCAAATATACAAGGTACAAGAAACCCTAAAGCTGTACTGGCTTATATTCTCAAACATCCTACAGGAGAATGGCATAAGGGCTCCTTTCGGCCCCGAGGATCATTCGGAGTTCCTCCGACTGGGAATGGAGAGGCTGGACCTTCTACGACGATTAGGAGAGCTGCTGGGGATTCCTCCAGCTCGGCCGAGGGAGGTAACACCTCCTCCGAGCTGGCCAACAAGCGACGAAGAATGACTAAAGACCAGATAATGGCTGACATCCTACGCTCGGCGACCTCAAGGATGGAGTACATGAACGGGGTCAAGAAGTGGTTTCCGTACGACTACTGCGCCAGGCTGCAAGCCTGGGAGTATGCTTCTCAGAAGCTATTTCCTGATCCACCGGTAACATATGAACCACCGTTCAATGACTCCATGTTTCATTGCCATGAAACACTCACAGAATGGGCTGCCGAGAACATCTACCATGTAACCCCGCAGGCGAGACCAATCAGCCTCTACATCTGCGGACCATCAAGGACAGGAAAGTCTACTTGGGCTAGAAGCCTCGGCAGACACAATTACTACCAGAATAACGTAGACTTCGGGATGTATGATCCCGAAGCTCTATATAATATAATAGATGATATACCCTTCAAGTTCTGTCCTTGCTGGAAGGCCCTCGTCGGAGCTCAGAAGGATTACACCGTTAATCCGAAATACGGGAAAAAGAAGCTCATCAAAGGAGGAATCCCTTCAATTGTCATCGTTAACGATGACGACGACTGGCCTAAAGCAATGACTGCTGAACAGCTCTCGTACTTCGAGAGCAACTGCATCATATTTAATATGAGTCTATATAATTTCAGCTTTATATCAGACACCGGCGCAACAGCGCCGGAAAGATGTTAA |
| Protein Sequence | MTNTESASEQPHNFAFQNKNVFLTYPRCSQEPHTMGLFLWNLLRPYGVLCASELHKDGTPHLHALAQTRHRIRTHDSSFFDNMDYHPNIQGTRNPKAVLAYILKHPTGEWHKGSFRPRGSFGVPPTGNGEAGPSTTIRRAAGDSSSSAEGGNTSSELANKRRRMTKDQIMADILRSATSRMEYMNGVKKWFPYDYCARLQAWEYASQKLFPDPPVTYEPPFNDSMFHCHETLTEWAAENIYHVTPQARPISLYICGPSRTGKSTWARSLGRHNYYQNNVDFGMYDPEALYNIIDDIPFKFCPCWKALVGAQKDYTVNPKYGKKKLIKGGIPSIVIVNDDDDWPKAMTAEQLSYFESNCIIFNMSLYNFSFISDTGATAPERC |
| NCBI Accession | YP_009551801.1 |
|---|---|
| Location | 1601-2515 |
| Protein Name | RepA |
| Coding Region | ATGACCAACACTGAATCCGCATCTGAGCAACCACATAACTTTGCCTTCCAGAACAAAAATGTCTTCCTCACTTATCCACGATGTAGCCAAGAGCCTCATACAATGGGCTTATTCCTCTGGAATCTGCTCAGGCCTTACGGCGTTTTATGTGCTTCTGAGCTTCATAAAGATGGGACTCCCCATCTCCATGCTCTTGCTCAGACTCGTCATCGCATTCGCACACATGACTCAAGTTTTTTTGATAATATGGATTATCATCCAAATATACAAGGTACAAGAAACCCTAAAGCTGTACTGGCTTATATTCTCAAACATCCTACAGGAGAATGGCATAAGGGCTCCTTTCGGCCCCGAGGATCATTCGGAGTTCCTCCGACTGGGAATGGAGAGGCTGGACCTTCTACGACGATTAGGAGAGCTGCTGGGGATTCCTCCAGCTCGGCCGAGGGAGGTAACACCTCCTCCGAGCTGGCCAACAAGCGACGAAGAATGACTAAAGACCAGATAATGGCTGACATCCTACGCTCGGCGACCTCAAGGATGGAGTACATGAACGGGGTCAAGAAGTGGTTTCCGTACGACTACTGCGCCAGGCTGCAAGCCTGGGAGTATGCTTCTCAGAAGCTATTTCCTGATCCACCGGTAACATATGAACCACCGTTCAATGACTCCATGTTTCATTGCCATGAAACACTCACAGAATGGGCTGCCGAGAACATCTACCATGTAACCCCGCAGGTATATTCGTTGCTCCATCCTCATTCTGACGCTGAGGCAGATCTACGATGGCTACATGATACATGCTTTGCAAGCAGGCGAGACCAATCAGCCTCTACATCTGCGGACCATCAAGGACAGGAAAGTCTACTTGGGCTAGAAGCCTCGGCAGACACAATTACTACCAGAATAACGTAG |
| Protein Sequence | MTNTESASEQPHNFAFQNKNVFLTYPRCSQEPHTMGLFLWNLLRPYGVLCASELHKDGTPHLHALAQTRHRIRTHDSSFFDNMDYHPNIQGTRNPKAVLAYILKHPTGEWHKGSFRPRGSFGVPPTGNGEAGPSTTIRRAAGDSSSSAEGGNTSSELANKRRRMTKDQIMADILRSATSRMEYMNGVKKWFPYDYCARLQAWEYASQKLFPDPPVTYEPPFNDSMFHCHETLTEWAAENIYHVTPQVYSLLHPHSDAEADLRWLHDTCFASRRDQSASTSADHQGQESLLGLEASADTITTRIT |
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