Paspalum striate mosaic virus
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_000899195.1 |
| Isolate |
Australia |
| Release date |
2015/2/22 |
| Submitter |
Geering,A.D., Thomas,J.E., Holton,T., Hadfield,J., Varsani,A., Geering,A.G. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ATGGCGGAGTACCCTCAGTCTGCTTTGATTGTTTCTGGTGCGATTCCACGGCGAAGCCAGGACGAGAGCTTTGCCACGTCTTTGAAGGTCACTGCTTTATCTTTATTTGCAGCATTTATTGCTGCTGCAGTCTTGACATTCATTTACAAGACTTGCATTGCGGATTTCATTACGCAATTCCGTTTATCCGGTTTAAGCAGTGTAACTTCATCTGGCTTTGGGCGGACCGCTGAGGTTCCGCCAGCTGTCCCTACAAGGACAGCGTCTGAGGTTTCAATTCCCGTAAGGGAAGCTGTTTCTGCTCCTCCTTTGGTTTCTTCCGTGGTTGGTGTTTAGTTTCCATGGCAGCTTCGTCGAAGAGGAAGCGCGGGAGTACTTCCGCAACCAAGCGGCGCAAGAAGCCGCGGTACACGAAGTGGACCTCTGCCCGCAGCTCTAACAGAGATGCGCTGCAGGTACAGACCTTCACCTGGGGTGAAGATCAGGCGTTCAACGCCGGAGGACGTGCGATACTTCTCACGGCCTTTACGCGTGGTTCTGCCGAGAACCAACGCAAATCCCAGGAGACCATTACATACAAGGTTAGTATTAACCTTGGTGTGTCAGCATCTGCTACCGTCCTCAAGTACTGCTGCAAGAGCCAGCCATTATGCTGGCTCGTATACGATAAGTCCCCGACTGGGATTACGGACCTGACCCCATCAGACATCTTCGATGTGCCCTCGGGGTTACAGAACTGGCCTTCCACCTGGAAGGTCAAACGAGAAGCGTCTCATCGCTTCGTCGTCAAACGGCGTTGGCCGTTCACGTTATCATGCAACGGGAGTACGTTCCAGAAGGACTACACAAACCTGCCTGTCTGTAACACAGACAACCTGGTGTCTGTAACGAGGTTCGCCAAGGGACTTGGAGTGCGAACGGAGTGGAAGGACACAACGACAGCGGACGCGTCGGACATCAAGGGTGGAGCCCTCTACCTTGTGGTAGCCCCCGCTAACGGGCTTGTGTTTACAGCCCGTGGTGTAATCAAAGTCTACTTTAAGTCAGTGGGCAACCAGTAGCCCATTTGTAATGAGCCCATGGGGCGAACTTATGAAATAAAATCTTGCATTTTATTCATCGCATTGAGATGCATGCGTAGCAGCAAAGCAAATTACATAACTGGTTTTGTGGGTCGCGAGGGGGAACCCGGAGCACGCACCCAAAACACTAAATGAAACACACCCAAATAATCTATCTGAAAATGCCGGACGAGGACTCGCGAAGGAGTCCGAGATTACAAAGCTTCGAAGAAGCTTTCACCCGAGTACATGTAATGTACGACTGCGTTAGCATTGAACCAGTCAGCCTGACTAGGCTGCATTTGTTGAAGCCAGTCTTCATCCTCGTTCACGAGGATTATGCATGGAATGCCATTTGACAGCAGCCGTTTCTTGCCATACTTCGGATTTACTGTAATGTCCTTCTGGCTTCCGACAAGCCCTTTCCAACAAGGAACAAATTTAAACGGAATGTCATCTATGACATTATATCTTGCATTTTGAATTACGTGGAGGAAGTCCACGGAATGTTGCCAGTAGTTATGACTTCCGAGACTTCTTGCCCAAGAAGTCTTTCCTGTTCTTGTTGGACCACATATGTAGAGGGAACGTCTTCGTTCAGTAGGACTTCTGTCCTGCTTAGATCAGACATCCATTGGAGGTCAAGCTTTGCTTGTTCCTCCGAAACACCGTTGTGTATGGAATACGCATAAGGACTTACAGTGTATAATTCATCTCGGAGCCATGCTCCGATAACAGGATGTGTATCCTGCGATGGCATCCCGAAGGGATCCACATACGGTGGAGGAGTGGAAGGGAACAGCGATTCAGCTGAGAACTGAAACTGCTGCAACCTTGTTGCCCAGTCGAATGGGAAGGATTTCCTTACCATCGAGAGATAGTCCTCCTTGTTTGTGGAACTTTTAATGATTTCCGCCATTTTTGCATCCTTCGTAGAAGGTGCGTCCGCCTTCTTCTTTCTCGGACGCTTGATTTCCTGAAATACCCCATATTCCGCTTCGGATATTGGGGATTTCTTGCAGTATGATAATGCCTTCTTGGGCATTCTTGGATTTTGAACATTTGGATGAAATTCTTTGATGTCGAAGAATTTTGCACTTGTAGTGCGCACGTATTTTGAGCATTGTATTATACAATGCAGATGGTGAGATCCATCTTTATGTGCCTCTTGTGCCACGTAGATATACGTGGGACAGTATTTCTTCAATAAAGAAGAAATATATTCCAGGAGGAATACAGCCGTGAGGTTGCACTTACTGTATGTGAGGAACAGGTTCCTCGCTCTCACCTTGAAGCATGAAGAGGAGGGGGCGTCGATAGACTGCCCACCCCTTCCTGGGCTCTCCATTTGACTGCCCACTTCACTGTTGCTTGTCTCACTGACAAGTGAGGACATCTCGTCAGAAGCTATCGTGGATAGCTTCAACGCCCTTAGATCTTCTTTGAGATCCGAGGTTTTGAAAAACTCTCTTCCTAGACCGCTGCCGACTGCCGAGTTCTCCCCCCGAAGCCCTTCTTATATGGGCCGGGGGGCATTGCTTTCCGTGTGGGCCGGCCCGGTAAAGAGGCAGCGCAATAATATTACCGCTGCCCTCTTTACCCGAGGGCCCCATGCTCAACGGGGACCGAGGTGGCTTTGCCCGGGCCTTATCAGCCCACTAAGGGCTGTTTCCCGCAATCTGATTTCGTTTTTTGCTTTGACTGACATTTCTGCTTTGGATGCGGCTTTAAATAGCCGCATCGCACTACTACGCC
Gene Information
|
NCBI Accession
|
YP_006659972.1
|
|
Location
|
1-336 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGGCGGAGTACCCTCAGTCTGCTTTGATTGTTTCTGGTGCGATTCCACGGCGAAGCCAGGACGAGAGCTTTGCCACGTCTTTGAAGGTCACTGCTTTATCTTTATTTGCAGCATTTATTGCTGCTGCAGTCTTGACATTCATTTACAAGACTTGCATTGCGGATTTCATTACGCAATTCCGTTTATCCGGTTTAAGCAGTGTAACTTCATCTGGCTTTGGGCGGACCGCTGAGGTTCCGCCAGCTGTCCCTACAAGGACAGCGTCTGAGGTTTCAATTCCCGTAAGGGAAGCTGTTTCTGCTCCTCCTTTGGTTTCTTCCGTGGTTGGTGTTTAG |
|
Protein Sequence
|
MAEYPQSALIVSGAIPRRSQDESFATSLKVTALSLFAAFIAAAVLTFIYKTCIADFITQFRLSGLSSVTSSGFGRTAEVPPAVPTRTASEVSIPVREAVSAPPLVSSVVGV |
|
NCBI Accession
|
YP_006659973.1
|
|
Location
|
342-1061 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGGCAGCTTCGTCGAAGAGGAAGCGCGGGAGTACTTCCGCAACCAAGCGGCGCAAGAAGCCGCGGTACACGAAGTGGACCTCTGCCCGCAGCTCTAACAGAGATGCGCTGCAGGTACAGACCTTCACCTGGGGTGAAGATCAGGCGTTCAACGCCGGAGGACGTGCGATACTTCTCACGGCCTTTACGCGTGGTTCTGCCGAGAACCAACGCAAATCCCAGGAGACCATTACATACAAGGTTAGTATTAACCTTGGTGTGTCAGCATCTGCTACCGTCCTCAAGTACTGCTGCAAGAGCCAGCCATTATGCTGGCTCGTATACGATAAGTCCCCGACTGGGATTACGGACCTGACCCCATCAGACATCTTCGATGTGCCCTCGGGGTTACAGAACTGGCCTTCCACCTGGAAGGTCAAACGAGAAGCGTCTCATCGCTTCGTCGTCAAACGGCGTTGGCCGTTCACGTTATCATGCAACGGGAGTACGTTCCAGAAGGACTACACAAACCTGCCTGTCTGTAACACAGACAACCTGGTGTCTGTAACGAGGTTCGCCAAGGGACTTGGAGTGCGAACGGAGTGGAAGGACACAACGACAGCGGACGCGTCGGACATCAAGGGTGGAGCCCTCTACCTTGTGGTAGCCCCCGCTAACGGGCTTGTGTTTACAGCCCGTGGTGTAATCAAAGTCTACTTTAAGTCAGTGGGCAACCAGTAG |
|
Protein Sequence
|
MAASSKRKRGSTSATKRRKKPRYTKWTSARSSNRDALQVQTFTWGEDQAFNAGGRAILLTAFTRGSAENQRKSQETITYKVSINLGVSASATVLKYCCKSQPLCWLVYDKSPTGITDLTPSDIFDVPSGLQNWPSTWKVKREASHRFVVKRRWPFTLSCNGSTFQKDYTNLPVCNTDNLVSVTRFAKGLGVRTEWKDTTTADASDIKGGALYLVVAPANGLVFTARGVIKVYFKSVGNQ |
|
NCBI Accession
|
YP_006659974.1
|
|
Location
|
1277-1675,1762-2457 |
|
Protein Name
|
Rep |
|
Coding Region
|
ATGTCCTCACTTGTCAGTGAGACAAGCAACAGTGAAGTGGGCAGTCAAATGGAGAGCCCAGGAAGGGGTGGGCAGTCTATCGACGCCCCCTCCTCTTCATGCTTCAAGGTGAGAGCGAGGAACCTGTTCCTCACATACAGTAAGTGCAACCTCACGGCTGTATTCCTCCTGGAATATATTTCTTCTTTATTGAAGAAATACTGTCCCACGTATATCTACGTGGCACAAGAGGCACATAAAGATGGATCTCACCATCTGCATTGTATAATACAATGCTCAAAATACGTGCGCACTACAAGTGCAAAATTCTTCGACATCAAAGAATTTCATCCAAATGTTCAAAATCCAAGAATGCCCAAGAAGGCATTATCATACTGCAAGAAATCCCCAATATCCGAAGCGGAATATGGGGTATTTCAGGAAATCAAGCGTCCGAGAAAGAAGAAGGCGGACGCACCTTCTACGAAGGATGCAAAAATGGCGGAAATCATTAAAAGTTCCACAAACAAGGAGGACTATCTCTCGATGGTAAGGAAATCCTTCCCATTCGACTGGGCAACAAGGTTGCAGCAGTTTCAGTTCTCAGCTGAATCGCTGTTCCCTTCCACTCCTCCACCGTATGTGGATCCCTTCGGGATGCCATCGCAGGATACACATCCTGTTATCGGAGCATGGCTCCGAGATGAATTATACACTGACAGAAGTCCTACTGAACGAAGACGTTCCCTCTACATATGTGGTCCAACAAGAACAGGAAAGACTTCTTGGGCAAGAAGTCTCGGAAGTCATAACTACTGGCAACATTCCGTGGACTTCCTCCACGTAATTCAAAATGCAAGATATAATGTCATAGATGACATTCCGTTTAAATTTGTTCCTTGTTGGAAAGGGCTTGTCGGAAGCCAGAAGGACATTACAGTAAATCCGAAGTATGGCAAGAAACGGCTGCTGTCAAATGGCATTCCATGCATAATCCTCGTGAACGAGGATGAAGACTGGCTTCAACAAATGCAGCCTAGTCAGGCTGACTGGTTCAATGCTAACGCAGTCGTACATTACATGTACTCGGGTGAAAGCTTCTTCGAAGCTTTGTAA |
|
Protein Sequence
|
MSSLVSETSNSEVGSQMESPGRGGQSIDAPSSSCFKVRARNLFLTYSKCNLTAVFLLEYISSLLKKYCPTYIYVAQEAHKDGSHHLHCIIQCSKYVRTTSAKFFDIKEFHPNVQNPRMPKKALSYCKKSPISEAEYGVFQEIKRPRKKKADAPSTKDAKMAEIIKSSTNKEDYLSMVRKSFPFDWATRLQQFQFSAESLFPSTPPPYVDPFGMPSQDTHPVIGAWLRDELYTDRSPTERRRSLYICGPTRTGKTSWARSLGSHNYWQHSVDFLHVIQNARYNVIDDIPFKFVPCWKGLVGSQKDITVNPKYGKKRLLSNGIPCIILVNEDEDWLQQMQPSQADWFNANAVVHYMYSGESFFEAL |
|
NCBI Accession
|
YP_006659975.1
|
|
Location
|
1546-2457 |
|
Protein Name
|
RepA |
|
Coding Region
|
ATGTCCTCACTTGTCAGTGAGACAAGCAACAGTGAAGTGGGCAGTCAAATGGAGAGCCCAGGAAGGGGTGGGCAGTCTATCGACGCCCCCTCCTCTTCATGCTTCAAGGTGAGAGCGAGGAACCTGTTCCTCACATACAGTAAGTGCAACCTCACGGCTGTATTCCTCCTGGAATATATTTCTTCTTTATTGAAGAAATACTGTCCCACGTATATCTACGTGGCACAAGAGGCACATAAAGATGGATCTCACCATCTGCATTGTATAATACAATGCTCAAAATACGTGCGCACTACAAGTGCAAAATTCTTCGACATCAAAGAATTTCATCCAAATGTTCAAAATCCAAGAATGCCCAAGAAGGCATTATCATACTGCAAGAAATCCCCAATATCCGAAGCGGAATATGGGGTATTTCAGGAAATCAAGCGTCCGAGAAAGAAGAAGGCGGACGCACCTTCTACGAAGGATGCAAAAATGGCGGAAATCATTAAAAGTTCCACAAACAAGGAGGACTATCTCTCGATGGTAAGGAAATCCTTCCCATTCGACTGGGCAACAAGGTTGCAGCAGTTTCAGTTCTCAGCTGAATCGCTGTTCCCTTCCACTCCTCCACCGTATGTGGATCCCTTCGGGATGCCATCGCAGGATACACATCCTGTTATCGGAGCATGGCTCCGAGATGAATTATACACTGTAAGTCCTTATGCGTATTCCATACACAACGGTGTTTCGGAGGAACAAGCAAAGCTTGACCTCCAATGGATGTCTGATCTAAGCAGGACAGAAGTCCTACTGAACGAAGACGTTCCCTCTACATATGTGGTCCAACAAGAACAGGAAAGACTTCTTGGGCAAGAAGTCTCGGAAGTCATAACTACTGGCAACATTCCGTGGACTTCCTCCACGTAA |
|
Protein Sequence
|
MSSLVSETSNSEVGSQMESPGRGGQSIDAPSSSCFKVRARNLFLTYSKCNLTAVFLLEYISSLLKKYCPTYIYVAQEAHKDGSHHLHCIIQCSKYVRTTSAKFFDIKEFHPNVQNPRMPKKALSYCKKSPISEAEYGVFQEIKRPRKKKADAPSTKDAKMAEIIKSSTNKEDYLSMVRKSFPFDWATRLQQFQFSAESLFPSTPPPYVDPFGMPSQDTHPVIGAWLRDELYTVSPYAYSIHNGVSEEQAKLDLQWMSDLSRTEVLLNEDVPSTYVVQQEQERLLGQEVSEVITTGNIPWTSST |