Genus | Begomovirus |
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NCBI Assembly | GCF_004786875.1 |
Isolate | India: Tamil Nadu |
Release date | 2021/6/1 |
Submitter | Parvathy,K., Angappan,K., Malathi,V.G., Richa,S., Jyothsna,P., Jeevalatha,A., Nirmal Kumar,R. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_010084337.1 |
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Location | 181-528 |
Gene Name | V2 |
Protein Name | pre-coat protein |
Coding Region | ATGTGGGACCCACTAGTAAATGATTTTCCTGAAACGGTGCATGGGTTTAGGTGTATGCTTGCTATAAAATACCTGCACCTAGTAGAAAATACGTATTCCCCTGATTCATTGGGATACGACCTGATACGTGAATTAATTTCCGTAGTTAGGGCTAAAAATTATGTCCAAGCGACCAGCAGATATGATCATTTCCGGGCCCGTCTCGAAGTATCGTCGATTGCTGACCTCAACCAGCCCATACAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGCCACAAAGGGAAAGGAATGGGCCAACAGGCCCATGAATCGGAAGCCCATGTTCTACAGAATGTACAGAAGCCCTGA |
Protein Sequence | MWDPLVNDFPETVHGFRCMLAIKYLHLVENTYSPDSLGYDLIRELISVVRAKNYVQATSRYDHFRARLEVSSIADLNQPIQQACCCPHCPRHKGKGMGQQAHESEAHVLQNVQKP |
NCBI Accession | YP_010084338.1 |
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Location | 341-1111 |
Gene Name | V1 |
Protein Name | coat protein |
Coding Region | ATGTCCAAGCGACCAGCAGATATGATCATTTCCGGGCCCGTCTCGAAGTATCGTCGATTGCTGACCTCAACCAGCCCATACAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGCCACAAAGGGAAAGGAATGGGCCAACAGGCCCATGAATCGGAAGCCCATGTTCTACAGAATGTACAGAAGCCCTGATGTTCCGAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAGTCGAGACACGATGTAGTCCATATAGGGAAGGTCATGTGTATCAGCGATGTTACCAGGGGTACAGGTCTGACCCATAGAGTAGGTAAACGTTTCTGCGTTAAGTCCGTTTATGTTCTGGGCAAGATATGGATGGACGAAAACATTAAAACCAAAAATCACACTAACAGTGTTATGTTCTTCCTCGTTCGTGATCGTCGTCCGGTAGATAAGCCGCAAGATTTTGGGGATGTATTTAACATGTTCGACAACGAGCCGAGCACGGCGACTGTGAAGAATGTGCATAGGGATCGTTATCAGGTTCTCCGGAAGTGGCATGCAACCGTCACTGGTGGACAGTATGCGTCAAAGGAACAGGCGTTAGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGCAAGTATGAGAATCATAGTGAGAATGCTCTGATGTTGTATATGGCATGTACGCATGCCTCTAACCCCGTGTATGCGACATTGAAAATACGCATCTATTTCTACGATTCAGTGACAAATTAA |
Protein Sequence | MSKRPADMIISGPVSKYRRLLTSTSPYSKRAAVRIVRATKGKEWANRPMNRKPMFYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGDVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | YP_010084339.1 |
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Location | 2230-2487 |
Gene Name | C4 |
Protein Name | C4 protein |
Coding Region | ATGGGTCTCTGCATGTCCATGCCCTCATCCAGTTCAAGGGTAAAGCCCAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTAACACCTCATCCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCTCATCAGATGTCAAGTCCTACATCGAGAAGGACGGTGATTACATCGACTGGGGTGACTTTCAGGTCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCCTAA |
Protein Sequence | MGLCMSMPSSSSRVKPSSETPDISMSLTLTPHPNSIQTSRELSPHQMSSPTSRRTVITSTGVTFRSMEDLLEEVNRQLMMLQQRP |
1 |
Padelkar P, et al. Mol Biol Rep. 2025 Sep 20;52(1):933. doi: 10.1007/s11033-025-11038-5. PMID: 40974375 |
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2 |
Venkataravanappa V, et al. Microb Pathog. 2023 Jul;180:106127. doi: 10.1016/j.micpath.2023.106127. Epub 2023 Apr 28. PMID: 37119939 |
3 |
Jayanthi P, et al. Int Microbiol. 2025 Apr;28(4):863-876. doi: 10.1007/s10123-024-00580-0. Epub 2024 Sep 4. PMID: 39230779 |