Chilli leaf curl Bhavanisagar virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_004786875.1
Isolate India: Tamil Nadu
Release date 2021/6/1
Submitter Parvathy,K., Angappan,K., Malathi,V.G., Richa,S., Jyothsna,P., Jeevalatha,A., Nirmal Kumar,R.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_055130
ACCGGATGGCCGCGTACCCTCCAGTCGCTTTCATGGACCCCACGTGTGTCTTATCCCCTTTGTCTTTTCTGCGGGCCCCACCACATTCACATGTTAGCCAATCATATTTCAGCCTCAAAGCTTAATTATTTATGTGGGCCCCTATATATACTTGGTCCCCAAGTTTAACAGTCATTTACCATGTGGGACCCACTAGTAAATGATTTTCCTGAAACGGTGCATGGGTTTAGGTGTATGCTTGCTATAAAATACCTGCACCTAGTAGAAAATACGTATTCCCCTGATTCATTGGGATACGACCTGATACGTGAATTAATTTCCGTAGTTAGGGCTAAAAATTATGTCCAAGCGACCAGCAGATATGATCATTTCCGGGCCCGTCTCGAAGTATCGTCGATTGCTGACCTCAACCAGCCCATACAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGCCACAAAGGGAAAGGAATGGGCCAACAGGCCCATGAATCGGAAGCCCATGTTCTACAGAATGTACAGAAGCCCTGATGTTCCGAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAGTCGAGACACGATGTAGTCCATATAGGGAAGGTCATGTGTATCAGCGATGTTACCAGGGGTACAGGTCTGACCCATAGAGTAGGTAAACGTTTCTGCGTTAAGTCCGTTTATGTTCTGGGCAAGATATGGATGGACGAAAACATTAAAACCAAAAATCACACTAACAGTGTTATGTTCTTCCTCGTTCGTGATCGTCGTCCGGTAGATAAGCCGCAAGATTTTGGGGATGTATTTAACATGTTCGACAACGAGCCGAGCACGGCGACTGTGAAGAATGTGCATAGGGATCGTTATCAGGTTCTCCGGAAGTGGCATGCAACCGTCACTGGTGGACAGTATGCGTCAAAGGAACAGGCGTTAGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGCAAGTATGAGAATCATAGTGAGAATGCTCTGATGTTGTATATGGCATGTACGCATGCCTCTAACCCCGTGTATGCGACATTGAAAATACGCATCTATTTCTACGATTCAGTGACAAATTAATAAATATTGTATTTTATTATGTTTGAACTCTGTACATACACTGTTTTTGTCAACACATTCCATAATACATGATCAATAGCTCGAATTACATTATTTAGGCTAATTACAGCAAAATTATTAAGACACTGCATTACTTGGGTCCTAAATACCCTTAAGAAATGACCAGTCTGAGGCTGTAAGGTCGTCCAGATTCGGAAGGTTAGAAAACATTTGTGTATCCCCAACGCTTTCCGAAGGTTGTGGTTGAACTGGACCCTTACAGTTATCATGTCCTTGTTGTAGTTGAGGGTCGTCTGTGGTGGCTGAGGATTGTGAAATACACGGGATTTGGGACCTGCCACATCCGGACGCCATTCGTTGCCTGAGCTGCATTGATGCGTTCCCCTGTGCGTAAATCCATAATTCCTGCAATTTATATTCATGTAGTATGAACAACCACACTCAAGGTCGACTCTCTTCCGCCTGATGCTCCTCTTGTATTGCCTGTGGAGAACCTTGATGGGTACCGGAGTAGAGTGGGCCTGTGAGGGTGACGAAGATTGCATTCTTGAGTGCCCAATTCTTTAATGCAGAATGCTTTTCTTCGTCCAGGTACTCTTTATAGCTGGAGTTGGGCCCTGGATTGCAGAGGAAGATAGTGGGAATGCCACCTTTAATTTGAACTGGCTTTCCGTATTTGGTGTTGCTTTGCCAGTCTTTTTGGGCCCCCCATGAATTCCTTAAAGTGCTTTAAGTAATGGGGGTCTACGTCATCAATGACGTTATACCATGCGTCATTGGAATAAATCTTTGGGCTTAAGTCCAAATGTCCACATAAATAGTTATGTGGACCCAAGGACCTGGCCCATATTGTCTTCCCCGTACGACTATCACCCTCAACAACTACACTTACGGGCCTTATCGGCCGCGCAGCGGCCCCCCACAACATTATCTGCAGCCCATTCTTCAAGTTCATCGGAACTTGATCAAAAGAAGAAAGAGAAAAAGGAGAAACATAACCTCTCGTGGAGGTGCAAAAATCCTATCTAAGTTGGATTTTAAATTATGATATTTAAAAATAAAATCATGGGGGAGTTTCTCCCTTATTATTGCCAGAGCGGCATCAGCGGAGCCTGAATTTAGGGCCTCTGCTGCAGCATCATTAGCTGTCTGTTGACCTCCTCTAGCAGATCTTCCATCGACCTGAAAGTCACCCCAGTCGATGTAATCACCGTCCTTCTCGATGTAGGACTTGACATCTGATGAGGACTTAGCTCCCTGGAAGTTTGGATGGAATTGGGATGAGGTGTTAGGGTGAGTGACATCGAAATGTCTGGGGTTTCTGAACTGGGCTTTACCCTTGAACTGGATGAGGGCATGGACATGCAGAGACCCATCTTGATGTTTTTCCTGCGCAACTCTTATAAATAATTTATCAGATGGACAGTTAATGCCCTTGATGAGTTCTAACATTTGTTCTTTGGGTATGGGGCATTTTGGGTATGTTAGAAAAATATTTTTGGCTTTAACCTGAAACGACGTCGGACGTGTCATTCTGTATTGGGTGCTCTCAAAACTCTGTGGCAATTGGGGGCTTTGGGGGCTCTTATATATGAAGCCCCCAAATGGCATTACGGTAAATTGGAGGAAATTGCCAATCAATTTCCCGCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_010084337.1
Location 181-528
Gene Name V2
Protein Name pre-coat protein
Coding Region ATGTGGGACCCACTAGTAAATGATTTTCCTGAAACGGTGCATGGGTTTAGGTGTATGCTTGCTATAAAATACCTGCACCTAGTAGAAAATACGTATTCCCCTGATTCATTGGGATACGACCTGATACGTGAATTAATTTCCGTAGTTAGGGCTAAAAATTATGTCCAAGCGACCAGCAGATATGATCATTTCCGGGCCCGTCTCGAAGTATCGTCGATTGCTGACCTCAACCAGCCCATACAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGCCACAAAGGGAAAGGAATGGGCCAACAGGCCCATGAATCGGAAGCCCATGTTCTACAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLVNDFPETVHGFRCMLAIKYLHLVENTYSPDSLGYDLIRELISVVRAKNYVQATSRYDHFRARLEVSSIADLNQPIQQACCCPHCPRHKGKGMGQQAHESEAHVLQNVQKP

NCBI Accession YP_010084338.1
Location 341-1111
Gene Name V1
Protein Name coat protein
Coding Region ATGTCCAAGCGACCAGCAGATATGATCATTTCCGGGCCCGTCTCGAAGTATCGTCGATTGCTGACCTCAACCAGCCCATACAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGCCACAAAGGGAAAGGAATGGGCCAACAGGCCCATGAATCGGAAGCCCATGTTCTACAGAATGTACAGAAGCCCTGATGTTCCGAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAGTCGAGACACGATGTAGTCCATATAGGGAAGGTCATGTGTATCAGCGATGTTACCAGGGGTACAGGTCTGACCCATAGAGTAGGTAAACGTTTCTGCGTTAAGTCCGTTTATGTTCTGGGCAAGATATGGATGGACGAAAACATTAAAACCAAAAATCACACTAACAGTGTTATGTTCTTCCTCGTTCGTGATCGTCGTCCGGTAGATAAGCCGCAAGATTTTGGGGATGTATTTAACATGTTCGACAACGAGCCGAGCACGGCGACTGTGAAGAATGTGCATAGGGATCGTTATCAGGTTCTCCGGAAGTGGCATGCAACCGTCACTGGTGGACAGTATGCGTCAAAGGAACAGGCGTTAGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAGGCTGGCAAGTATGAGAATCATAGTGAGAATGCTCTGATGTTGTATATGGCATGTACGCATGCCTCTAACCCCGTGTATGCGACATTGAAAATACGCATCTATTTCTACGATTCAGTGACAAATTAA
Protein Sequence MSKRPADMIISGPVSKYRRLLTSTSPYSKRAAVRIVRATKGKEWANRPMNRKPMFYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGDVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN

NCBI Accession YP_010084339.1
Location 2230-2487
Gene Name C4
Protein Name C4 protein
Coding Region ATGGGTCTCTGCATGTCCATGCCCTCATCCAGTTCAAGGGTAAAGCCCAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTAACACCTCATCCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCTCATCAGATGTCAAGTCCTACATCGAGAAGGACGGTGATTACATCGACTGGGGTGACTTTCAGGTCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCCTAA
Protein Sequence MGLCMSMPSSSSRVKPSSETPDISMSLTLTPHPNSIQTSRELSPHQMSSPTSRRTVITSTGVTFRSMEDLLEEVNRQLMMLQQRP

References More References in PubMed

1

Molecular characterization and multiplex PCR assay for the detection and identification of three different begomovirus species in the chilli fields of Tamil Nadu.

Padelkar P, et al.  Mol Biol Rep. 2025 Sep 20;52(1):933. doi: 10.1007/s11033-025-11038-5.

PMID: 40974375
2

Diversity and phylogeography of begomoviruses and DNA satellites associated with the leaf curl and mosaic disease complex of eggplant.

Venkataravanappa V, et al.  Microb Pathog. 2023 Jul;180:106127. doi: 10.1016/j.micpath.2023.106127. Epub 2023 Apr 28.

PMID: 37119939
3

Molecular characterization to study the genetic diversity of begomoviruses occurring in the major chilli growing areas of Tamil Nadu state of India.

Jayanthi P, et al.  Int Microbiol. 2025 Apr;28(4):863-876. doi: 10.1007/s10123-024-00580-0. Epub 2024 Sep 4.

PMID: 39230779