Maize striate mosaic virus
Basic Information
| Genus | Mastrevirus |
|---|---|
| NCBI Assembly | GCF_004130985.1 |
| Isolate | Brazil |
| Release date | 2019/2/12 |
| Submitter | Fontenele,R.S., Alves-Freitas,D.M.T., Silva,P.I.T., Foresti,J., Silva,P.R., Godinho,M.T., Varsani,A., Ribeiro,S.G., Tanno,P.I., Freitas,D.M.T.A. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_040541
Gene Information
| NCBI Accession | YP_009551895.1 |
|---|---|
| Location | 1-363 |
| Protein Name | movement protein |
| Coding Region | ATGGATTTTCTTTTGCAATTATTGCCGTTCTATCGCTATAAATCTTTACTCAGTGCTGTTGCCTTTGAGATGGAGAAGGGACCTGGTCCAGAGGTGTTTTCGCCCCCAGTGGTTGAGGTGCCTTTCTCCGAAACTCCCAGTGCTGGCTCGGACCAGACCTGGCGAACCTTGGTTCTTGTCTTCCTGTTCGTGGCTCTTAGTATCGGTATTGTTGCAGCTCTCTACTGGGTCTGTGTGCGTGACTGTGTGTTATCGGCTCGTGCGAAACGGGCCAGGACAATAACCGAGTTCGGTTTCGGCAACACTCCGGGTGATCGGAGGGCTCCTCCTCCGCAGGCCCTTGCAGCTGGTGGCCCTGTCTGA |
| Protein Sequence | MDFLLQLLPFYRYKSLLSAVAFEMEKGPGPEVFSPPVVEVPFSETPSAGSDQTWRTLVLVFLFVALSIGIVAALYWVCVRDCVLSARAKRARTITEFGFGNTPGDRRAPPPQALAAGGPV |
| NCBI Accession | YP_009551896.1 |
|---|---|
| Location | 363-1106 |
| Protein Name | capsid protein |
| Coding Region | ATGCGTCCAATGACGGGAAAGAGGAAGAGGACCGCTGGTAGTTCTTCGGTAAATCGTCGGAAGTCCCGCCGTGTTTTACCTAGGACTGTGGCTCCGTATTCCCAGCTACCTTCCAGGCTTCCGAGCCTCCAGGTGCAAACATTTGCTTCGCAGGGTTCTGCCGTGGTGGAAGTTAAGAAGGGTGGTAATTGTCTGATGGTTACCTCCTACAGCCGTGGCTCTGACGAGAGTCAGAGACACACCAATGAGACCATGACCTACAAGATGTCGTTGGACCACGTCATGGTGTTACGTGCGGAGCTCTGTAAGTATAGCTTCAAGGCTACCCACTGTGGTTGGGTTGTGTATGACGCTAAACCCACGGGCAACCAGGTTACGTGCAAGACTATATTCGGCTACCCGGACGGGCTTGTGGATTACCCCACGACCTGGAAGGTTGCACGTGACGTGGCTCATCGCTTCGTGGTGAAGAAACGTTGGACCTACCGGATGGAATCCAATGGGTCTAACTCGTCTAAGGATTGGAGTAATGGGACTGGTATACCTCCTTGCAACCGGTCGGTGTACGTCAAGCAGTTCGTGAGCAAGCTCAACTGCCGAACGGAGTGGAAGAACACCACCGGGGGTGACTATGGCGATATCAAAGGCGGAGCCCTCTATGTTGTGCTCGCTGCCGGCCAAGGCATGGAGCACATGGCCTATGGTACCACGAGGATGTATTTCAAGAGCATCGGGAACCAGTGA |
| Protein Sequence | MRPMTGKRKRTAGSSSVNRRKSRRVLPRTVAPYSQLPSRLPSLQVQTFASQGSAVVEVKKGGNCLMVTSYSRGSDESQRHTNETMTYKMSLDHVMVLRAELCKYSFKATHCGWVVYDAKPTGNQVTCKTIFGYPDGLVDYPTTWKVARDVAHRFVVKKRWTYRMESNGSNSSKDWSNGTGIPPCNRSVYVKQFVSKLNCRTEWKNTTGGDYGDIKGGALYVVLAAGQGMEHMAYGTTRMYFKSIGNQ |
| NCBI Accession | YP_009551897.1 |
|---|---|
| Location | 1303-1704,1785-2414 |
| Protein Name | replication-associated protein |
| Coding Region | ATGTCTCACACAAGCTTCCGTTTCAGAGCCAAGAATGTCTTCCTCACGTACCCACGCTGTCCTATTGGCCCTGAGTTTCTTTGTGATCATCTCTGGAACCTCGTTACCCCTTATGATCCACTCTACGTACACGTTGCTCAAGAAAATCACAAGGACGGTGGGCTACACAGCCACGTCCTCATTCAAACCAGGATCGAAATCAGCACTTTCGATCCTACGTATTTTGACTACACTGGGACTAGTATTCCTGGTGCAGTTGTCTTTCACCCTAACATACAGGCATGCAGAAACGTCCGTGACTGTTTGGCGTACATACGGAAGAACACCATTAACGAAGTATCCAAGGGAGCATTCAAGTGCAGTGGAGCTGGAAGGCCGAAGAAACAAGACTCGGCACCAAGCCGGGACGCCAAGATGTGTCAGATCATGTCTTCTGCCACCTCTAGGAGCGATTACCTCTCAATGGTCAGAGGTGCCTTCCCGTTTGAATGGGCTACTAAACTGGCCCAATTTGAATACAGTGCATCCAAGCTATTTCCAGATGCTCCCACGACGAATGCCATCCCGTCAAACATTGATCTCACCTGCCATGAGAACATCATGCCCTGGCTGCGGGACGACCTGTACACTGAACGAGGGCAAGGAAGACGTCCCCGAAGCCTCTACATATGCGGAAGAACGAGGACGGGCAAGACAACATGGGCAAGAAGCCTCGGGCCACACAACTACTTCCAACACCAGGTGGACTACTTCGCCTGGAGCGAAGAGGCCACGTATGTCGTCATAGACGACATACCTTTCAAGTTCTGCCCGAACTGGAAGGCGATCGTGGGGAGCCAGCATGATTACACCGTCAACCCTAAATACGGTAAAAAAAGAAAAATAAAAGGAGGAATACCGGCCATTATATTGGTGAACGAGGACGAGGACTGGCTCATGAGCATGACAACCAGTCAGATAGACTGGTTTCTGGAGAATTGTGTAGTGTACCACATGACTCCAGGCGAATCATTCTTCAACTATGCCGAATAG |
| Protein Sequence | MSHTSFRFRAKNVFLTYPRCPIGPEFLCDHLWNLVTPYDPLYVHVAQENHKDGGLHSHVLIQTRIEISTFDPTYFDYTGTSIPGAVVFHPNIQACRNVRDCLAYIRKNTINEVSKGAFKCSGAGRPKKQDSAPSRDAKMCQIMSSATSRSDYLSMVRGAFPFEWATKLAQFEYSASKLFPDAPTTNAIPSNIDLTCHENIMPWLRDDLYTERGQGRRPRSLYICGRTRTGKTTWARSLGPHNYFQHQVDYFAWSEEATYVVIDDIPFKFCPNWKAIVGSQHDYTVNPKYGKKRKIKGGIPAIILVNEDEDWLMSMTTSQIDWFLENCVVYHMTPGESFFNYAE |
| NCBI Accession | YP_009551898.1 |
|---|---|
| Location | 1548-2414 |
| Protein Name | RepA |
| Coding Region | ATGTCTCACACAAGCTTCCGTTTCAGAGCCAAGAATGTCTTCCTCACGTACCCACGCTGTCCTATTGGCCCTGAGTTTCTTTGTGATCATCTCTGGAACCTCGTTACCCCTTATGATCCACTCTACGTACACGTTGCTCAAGAAAATCACAAGGACGGTGGGCTACACAGCCACGTCCTCATTCAAACCAGGATCGAAATCAGCACTTTCGATCCTACGTATTTTGACTACACTGGGACTAGTATTCCTGGTGCAGTTGTCTTTCACCCTAACATACAGGCATGCAGAAACGTCCGTGACTGTTTGGCGTACATACGGAAGAACACCATTAACGAAGTATCCAAGGGAGCATTCAAGTGCAGTGGAGCTGGAAGGCCGAAGAAACAAGACTCGGCACCAAGCCGGGACGCCAAGATGTGTCAGATCATGTCTTCTGCCACCTCTAGGAGCGATTACCTCTCAATGGTCAGAGGTGCCTTCCCGTTTGAATGGGCTACTAAACTGGCCCAATTTGAATACAGTGCATCCAAGCTATTTCCAGATGCTCCCACGACGAATGCCATCCCGTCAAACATTGATCTCACCTGCCATGAGAACATCATGCCCTGGCTGCGGGACGACCTGTACACTGTAAGCGAATTCTCTTACTTCCTATGTACAGGATCACTCGATCCGAAGGGAGATCTGACGTGGATGGCGGACCATACAAGGAACGAGGGCAAGGAAGACGTCCCCGAAGCCTCTACATATGCGGAAGAACGAGGACGGGCAAGACAACATGGGCAAGAAGCCTCGGGCCACACAACTACTTCCAACACCAGGTGGACTACTTCGCCTGGAGCGAAGAGGCCACGTATGTCGTCATAG |
| Protein Sequence | MSHTSFRFRAKNVFLTYPRCPIGPEFLCDHLWNLVTPYDPLYVHVAQENHKDGGLHSHVLIQTRIEISTFDPTYFDYTGTSIPGAVVFHPNIQACRNVRDCLAYIRKNTINEVSKGAFKCSGAGRPKKQDSAPSRDAKMCQIMSSATSRSDYLSMVRGAFPFEWATKLAQFEYSASKLFPDAPTTNAIPSNIDLTCHENIMPWLRDDLYTVSEFSYFLCTGSLDPKGDLTWMADHTRNEGKEDVPEASTYAEERGRARQHGQEASGHTTTSNTRWTTSPGAKRPRMSS |
References More References in PubMed
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