Maize streak Reunion virus
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_000894615.1 |
| Isolate |
Reunion |
| Release date |
2015/2/22 |
| Submitter |
Pande,D., Kraberger,S., Lefeuvre,P., Lett,J.M., Shepherd,D.N., Varsani,A., Martin,D.P., Lett,J.-M. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ATGGAGGCGCCCTCGACGTTGCAGGTATACCCTCAGCCCTTGAGCCTTGTAACCCAGTCTCCGCCGGCACCCACCGCCGGCGATCCGTGGTTCCGTGTCGTCTTTGTGTTGGTTATTGCACTCATCTGCTTAGGTATCGTGTACCTGTCTTATCGGTGGTTCATCAGAGATGTCATCATACTGCTTAGGGCGAAGAGACAGCGGAGCACGGAATATATTGGTTTCGGCAATACTCCAGCTAGGGCCGACGGTGGATTCCCAATCCACGGACGAGGAACTGATAGGCAGGGCCCTGTTCCTCCTGTCTAGGGCAGGGAAGCTCTTAGACGAGCTTCAGGAAGAGCTCTACTACGAGACCGATGGCAGGGAGTTCGCGCAAGAGGACCCGTCGGGGGGACGAGGTGGCCTGGAACTCGAAGAGATCCAGGTTGAGCGCTCAACGGAACCCCTCGAAGAGGGTCCCCAGAAATCCAAGGGTGCGCCCCAGTCTCCAGATCCAGACAATTACCAACGGAAGCTCAAGCATGGTTCCGGTTAAGCAACCGGGGTACTGTGGTCTCCTCGGGACTTATTCCCGAGGCTCTGATGAGAATCAGAGGCACACCAGCGAGACTATGACGTATAAAATAGCGTTAGATCTGCATTTCAGTATTACTTCTGCTGCCGCTGCTTATAGCAATTCAGGTACTGGGGTCTTGTGGCTGATTTACGATTCACAGCCGAACGGAGCTCAGCCTACGTTGAAGGACATCTTCGCTTACGAGGATTCACTGGTAGCGTGGCCATACACCTGGAAGGTCTCAAGAGAGGTCTGTCATCGCTTTGTGGTTAAACGGAGGTACACGTTCACACTCGAGTCAAATGGAAGAAGGAATGATGAGCAGCCGCCATCAAACTCAGTTTGGCCGCCTTGTAAGACTCACCTGTACTTCCACAAGTTCGCTAAGGGTTTGGGCGTGAGGACGGAGTGGAAGAACGATACAGCCGGTAGTGTTGGTAACATCAAGAAAGGAGCACTGTACATAGGTATAGCTCCAGGTAACGGGGTTGAGTTTAATGTGTTTGGCAAGACCCGTCTGTACTTCAAGAGCATTGGAAATCAATAAGAAAGTGTTATTCAAATAACCTGGTACTCCAGGTTATTATGTTCGTGTACAAAACACTGAGTACATAGAGGTCGCTTGCGACCAAAGAAAACACACATGAAGAAGGGCGGACAGGACAAAGCAGGCGGCATACGGGCGCGATAGGGGCAACACACTGAAAAAAAATCACACAATAGTAATGAAATCACTCCCTAAGAGGGAGTGTAGAACTTCTCATGAAGTTCCATCTGATACACAACGCAGTTGTCGTAGAAGTACTCCAGCTGAGCTGGAGTCATCACCTTCAGCCAGTCCTCATCGTAGTTGACGAGAATGATCGAGGGAATGCCTCCCGGTACTTCCATCCTGCGTGCATACTTAGGGTTAACGGTGTAGTCCTTCTGCCCCCCGACCAGCTGCTTCCAGCACGGGCAGAACTTGAAGGGTATGTCGTCCAGAACGTTGTACTTGGCAGACTTCCTGTACTTCAGGAAGTCCACCCCGTTCTGCCAGTAGTTATGGTTCACTGGGTCGATGCTCCGGGCCCAGGTAGTCTTGCCCGTGCGTGTAGGCCCAACGATGTAGAGGCTCCTTGGTCTTGAGGTGCGTGTAGCAGCATCCCCCTGGTGCATTCGTCCATCCACTTCAGGGACTCTGCAGCTTGCTCTACAGATTGACAGTGAGGATGTTCGAGCATGTAGATGTATGGGTGTACCTGAAAGATGTTCTCGTCCTTCCAGGATCGGATGGTCTCGTAGCATGTCAGGTCGGGCTCTGAGGGTGGATGAGGTGGCACGAAAGGTGATGGTAGTGTTGGGAAGAGTCGTTCTGCCGAGTACTCGAACTGTTGCAGTTTAGTAGCCCACTCGAAAGGGAAGGCCTTCTGGACTTCGGACAGGTACTCAGCCTTGCTGGTTGTGGTTTCGATAATGCCACGCATTATCTCGTTACGCTTTGGAACAGGGGTACTCCCGTAACCGGCTCCTGATGTGCCGGCTCTGGGAATGAAAGTACCTCTGGAGTAAACGGTGATCGGACTCTTGAGGATGTACTCTCTAGTCTTGTTAGGACTTCGAGAAGCCTGGATGTTAGGGTGGTAACCCTGAATGTCAAAAAAACCAGGATCCCTAGTAGACATAGGACGAATAGTCTGTAGCAAAACATGAAGATGTGGAGTCCCATCCTGGTGAGACTCAGAAGAAGCAAGAATGTAACTAGGAGTCCAAGGACGTGCGACCTCCCAGAGATGCTGCCCTGCCTCGAACGGGGTGAGGAGGCAGCGGGGGTAAGTGAGGAAGGCATTTGCAGACTTGAACTGGAAATTTCGTCGTGGTGGATCTGGTCCCACAGGGGTGTCGTGCTGGAGGAGGTCATCCTCCTCAGAGGGGTAGTCAGAGCCAGGCAGAGGTGTGGGAACCTCAGCCTGAACGGAGGGCGTAGGCACGAAGTGGTTGCCGAACGCACTCATGCTCTGGGACTTGGTCGCACCACGGGGCAAGGAGGCTGAGAAGATACTCAGCTTCTCAACTCTATCCCTTACCTGCGTTTTTGTTTCCGCCTCACAGCTTCTCAGCAAGCGTACTTATAGTACGCCATGTTGGGCCTTAAGTCCAGGCGCGGCCCAAAAACGCGAAAAATAATATTACGAGCGTTTTAAGGGCCCGCGACTGCGACGGCCACATGGCCCTGTATGTGGACGGAGCGCACTACAGGTAAAGCGGGAGGGAATCCCCCGTGCAATAATTTAGACTTTCCGAGTCATTCTTTATTAAAGGAGAGGTTACCCGTCAGAACGTG
Gene Information
|
NCBI Accession
|
YP_006331071.1
|
|
Location
|
1-309 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGGAGGCGCCCTCGACGTTGCAGGTATACCCTCAGCCCTTGAGCCTTGTAACCCAGTCTCCGCCGGCACCCACCGCCGGCGATCCGTGGTTCCGTGTCGTCTTTGTGTTGGTTATTGCACTCATCTGCTTAGGTATCGTGTACCTGTCTTATCGGTGGTTCATCAGAGATGTCATCATACTGCTTAGGGCGAAGAGACAGCGGAGCACGGAATATATTGGTTTCGGCAATACTCCAGCTAGGGCCGACGGTGGATTCCCAATCCACGGACGAGGAACTGATAGGCAGGGCCCTGTTCCTCCTGTCTAG |
|
Protein Sequence
|
MEAPSTLQVYPQPLSLVTQSPPAPTAGDPWFRVVFVLVIALICLGIVYLSYRWFIRDVIILLRAKRQRSTEYIGFGNTPARADGGFPIHGRGTDRQGPVPPV |
|
NCBI Accession
|
YP_006331072.1
|
|
Location
|
360-1106 |
|
Protein Name
|
capsid protein |
|
Coding Region
|
ATGGCAGGGAGTTCGCGCAAGAGGACCCGTCGGGGGGACGAGGTGGCCTGGAACTCGAAGAGATCCAGGTTGAGCGCTCAACGGAACCCCTCGAAGAGGGTCCCCAGAAATCCAAGGGTGCGCCCCAGTCTCCAGATCCAGACAATTACCAACGGAAGCTCAAGCATGGTTCCGGTTAAGCAACCGGGGTACTGTGGTCTCCTCGGGACTTATTCCCGAGGCTCTGATGAGAATCAGAGGCACACCAGCGAGACTATGACGTATAAAATAGCGTTAGATCTGCATTTCAGTATTACTTCTGCTGCCGCTGCTTATAGCAATTCAGGTACTGGGGTCTTGTGGCTGATTTACGATTCACAGCCGAACGGAGCTCAGCCTACGTTGAAGGACATCTTCGCTTACGAGGATTCACTGGTAGCGTGGCCATACACCTGGAAGGTCTCAAGAGAGGTCTGTCATCGCTTTGTGGTTAAACGGAGGTACACGTTCACACTCGAGTCAAATGGAAGAAGGAATGATGAGCAGCCGCCATCAAACTCAGTTTGGCCGCCTTGTAAGACTCACCTGTACTTCCACAAGTTCGCTAAGGGTTTGGGCGTGAGGACGGAGTGGAAGAACGATACAGCCGGTAGTGTTGGTAACATCAAGAAAGGAGCACTGTACATAGGTATAGCTCCAGGTAACGGGGTTGAGTTTAATGTGTTTGGCAAGACCCGTCTGTACTTCAAGAGCATTGGAAATCAATAA |
|
Protein Sequence
|
MAGSSRKRTRRGDEVAWNSKRSRLSAQRNPSKRVPRNPRVRPSLQIQTITNGSSSMVPVKQPGYCGLLGTYSRGSDENQRHTSETMTYKIALDLHFSITSAAAAYSNSGTGVLWLIYDSQPNGAQPTLKDIFAYEDSLVAWPYTWKVSREVCHRFVVKRRYTFTLESNGRRNDEQPPSNSVWPPCKTHLYFHKFAKGLGVRTEWKNDTAGSVGNIKKGALYIGIAPGNGVEFNVFGKTRLYFKSIGNQ |
|
NCBI Accession
|
YP_006331073.1
|
|
Location
|
1298-1708,1801-2553 |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGAGTGCGTTCGGCAACCACTTCGTGCCTACGCCCTCCGTTCAGGCTGAGGTTCCCACACCTCTGCCTGGCTCTGACTACCCCTCTGAGGAGGATGACCTCCTCCAGCACGACACCCCTGTGGGACCAGATCCACCACGACGAAATTTCCAGTTCAAGTCTGCAAATGCCTTCCTCACTTACCCCCGCTGCCTCCTCACCCCGTTCGAGGCAGGGCAGCATCTCTGGGAGGTCGCACGTCCTTGGACTCCTAGTTACATTCTTGCTTCTTCTGAGTCTCACCAGGATGGGACTCCACATCTTCATGTTTTGCTACAGACTATTCGTCCTATGTCTACTAGGGATCCTGGTTTTTTTGACATTCAGGGTTACCACCCTAACATCCAGGCTTCTCGAAGTCCTAACAAGACTAGAGAGTACATCCTCAAGAGTCCGATCACCGTTTACTCCAGAGGTACTTTCATTCCCAGAGCCGGCACATCAGGAGCCGGTTACGGGAGTACCCCTGTTCCAAAGCGTAACGAGATAATGCGTGGCATTATCGAAACCACAACCAGCAAGGCTGAGTACCTGTCCGAAGTCCAGAAGGCCTTCCCTTTCGAGTGGGCTACTAAACTGCAACAGTTCGAGTACTCGGCAGAACGACTCTTCCCAACACTACCATCACCTTTCGTGCCACCTCATCCACCCTCAGAGCCCGACCTGACATGCTACGAGACCATCCGATCCTGGAAGGACGAGAACATCTTTCAGGGGGATGCTGCTACACGCACCTCAAGACCAAGGAGCCTCTACATCGTTGGGCCTACACGCACGGGCAAGACTACCTGGGCCCGGAGCATCGACCCAGTGAACCATAACTACTGGCAGAACGGGGTGGACTTCCTGAAGTACAGGAAGTCTGCCAAGTACAACGTTCTGGACGACATACCCTTCAAGTTCTGCCCGTGCTGGAAGCAGCTGGTCGGGGGGCAGAAGGACTACACCGTTAACCCTAAGTATGCACGCAGGATGGAAGTACCGGGAGGCATTCCCTCGATCATTCTCGTCAACTACGATGAGGACTGGCTGAAGGTGATGACTCCAGCTCAGCTGGAGTACTTCTACGACAACTGCGTTGTGTATCAGATGGAACTTCATGAGAAGTTCTACACTCCCTCTTAG |
|
Protein Sequence
|
MSAFGNHFVPTPSVQAEVPTPLPGSDYPSEEDDLLQHDTPVGPDPPRRNFQFKSANAFLTYPRCLLTPFEAGQHLWEVARPWTPSYILASSESHQDGTPHLHVLLQTIRPMSTRDPGFFDIQGYHPNIQASRSPNKTREYILKSPITVYSRGTFIPRAGTSGAGYGSTPVPKRNEIMRGIIETTTSKAEYLSEVQKAFPFEWATKLQQFEYSAERLFPTLPSPFVPPHPPSEPDLTCYETIRSWKDENIFQGDAATRTSRPRSLYIVGPTRTGKTTWARSIDPVNHNYWQNGVDFLKYRKSAKYNVLDDIPFKFCPCWKQLVGGQKDYTVNPKYARRMEVPGGIPSIILVNYDEDWLKVMTPAQLEYFYDNCVVYQMELHEKFYTPS |
|
NCBI Accession
|
YP_006331074.1
|
|
Location
|
1609-2553 |
|
Protein Name
|
RepA |
|
Coding Region
|
ATGAGTGCGTTCGGCAACCACTTCGTGCCTACGCCCTCCGTTCAGGCTGAGGTTCCCACACCTCTGCCTGGCTCTGACTACCCCTCTGAGGAGGATGACCTCCTCCAGCACGACACCCCTGTGGGACCAGATCCACCACGACGAAATTTCCAGTTCAAGTCTGCAAATGCCTTCCTCACTTACCCCCGCTGCCTCCTCACCCCGTTCGAGGCAGGGCAGCATCTCTGGGAGGTCGCACGTCCTTGGACTCCTAGTTACATTCTTGCTTCTTCTGAGTCTCACCAGGATGGGACTCCACATCTTCATGTTTTGCTACAGACTATTCGTCCTATGTCTACTAGGGATCCTGGTTTTTTTGACATTCAGGGTTACCACCCTAACATCCAGGCTTCTCGAAGTCCTAACAAGACTAGAGAGTACATCCTCAAGAGTCCGATCACCGTTTACTCCAGAGGTACTTTCATTCCCAGAGCCGGCACATCAGGAGCCGGTTACGGGAGTACCCCTGTTCCAAAGCGTAACGAGATAATGCGTGGCATTATCGAAACCACAACCAGCAAGGCTGAGTACCTGTCCGAAGTCCAGAAGGCCTTCCCTTTCGAGTGGGCTACTAAACTGCAACAGTTCGAGTACTCGGCAGAACGACTCTTCCCAACACTACCATCACCTTTCGTGCCACCTCATCCACCCTCAGAGCCCGACCTGACATGCTACGAGACCATCCGATCCTGGAAGGACGAGAACATCTTTCAGGTACACCCATACATCTACATGCTCGAACATCCTCACTGTCAATCTGTAGAGCAAGCTGCAGAGTCCCTGAAGTGGATGGACGAATGCACCAGGGGGATGCTGCTACACGCACCTCAAGACCAAGGAGCCTCTACATCGTTGGGCCTACACGCACGGGCAAGACTACCTGGGCCCGGAGCATCGACCCAGTGA |
|
Protein Sequence
|
MSAFGNHFVPTPSVQAEVPTPLPGSDYPSEEDDLLQHDTPVGPDPPRRNFQFKSANAFLTYPRCLLTPFEAGQHLWEVARPWTPSYILASSESHQDGTPHLHVLLQTIRPMSTRDPGFFDIQGYHPNIQASRSPNKTREYILKSPITVYSRGTFIPRAGTSGAGYGSTPVPKRNEIMRGIIETTTSKAEYLSEVQKAFPFEWATKLQQFEYSAERLFPTLPSPFVPPHPPSEPDLTCYETIRSWKDENIFQVHPYIYMLEHPHCQSVEQAAESLKWMDECTRGMLLHAPQDQGASTSLGLHARARLPGPGASTQ |