Maize streak dwarfing virus
Basic Information
| Genus | Mastrevirus |
|---|---|
| NCBI Assembly | GCF_013088405.1 |
| Isolate | Ethiopia: Adama Zuria |
| Release date | 2021/6/1 |
| Submitter | Guadie,D., Tesfaye,K., Knierim,D., Winter,S., Abraham,A. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_055519
Gene Information
| NCBI Accession | YP_010087226.1 |
|---|---|
| Location | 158-475 |
| Protein Name | movement protein |
| Coding Region | ATGGGGCCGGCCTCGACATATCAGGTATTCACCACCTACCCAGATCTAGGTTACCAATCGCCTCCTGCTCCGACCACGGAAGGAGAGGAGCCGTGGTTCCGTGTCGTATTTGTTCTCGTTACAGCACTCGTGGTGATAGGTATTATTTACCTATCTTATCGGTGGTTCATCAGAGATGTCATCATTCTACTTAGGGCGAAACGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGTTAGGGCCGACCGTGGACGTAGCGGCGCTACCGAACCGGGAACTGGTCCAACGGCTCTTGGACATCTTGTCTAA |
| Protein Sequence | MGPASTYQVFTTYPDLGYQSPPAPTTEGEEPWFRVVFVLVTALVVIGIIYLSYRWFIRDVIILLRAKRQRSTEEIGFGNTPVRADRGRSGATEPGTGPTALGHLV |
| NCBI Accession | YP_010087227.1 |
|---|---|
| Location | 511-1260 |
| Protein Name | coat protein |
| Coding Region | ATGACGACGACGACGGGGAAGAGGAAGAGATCCAGTCGGGCGGACGAGGTGGCCTGGAACAAGAGATCCAGGTCGACCGCTTCGAGAAGCTTGAAATTGAATCTGAACCGGAGGGTAAGAGTACGACCAAGTCTTCAGATCCAGACTCTCGTTGCGACGGGGGCTTCGGAGATAGGCGTCCGAAAAGGAGGTACGATATCACTACTCGGCAGTTACAGCCGAGGTTCTGACGAGAGTCAGAGGCATACCAGTGAGACTATGACGTACAAGGTCGCTATGAATTACTATATATATGTGCCTGCGGAAGCATGCAAGTATTCGAACAAGGGGCTTTGCTGTATATGGTTGATATACGATGCGCAGCCGAACGGAGCTCAGCCGGCCATCAAGGACATCTTTGCACCGGAGAGCACTCTGGTGGACTGGCCGCATACTTGGGCGGTCTCAAGGGAGGTGTGTCATCGATTCGTTATTAAACGTCGGTACACGTTTACCCTCGAGACCAACGGTAGGATTGGCAGTGATGTTGTGCCTGCGAATACGGCGTGGTATCCATGTAATAAGTCGATTAATTTCACGAAGTTTGCGAAGGGACTCGGTGTTAAAACTGAGTGGAAGAACGACGCAAACGGTGATGTTGGAAGTATAAAGAAGGGTGCTCTGTACATCGCGTTTGCGAGTGGTAACGGGGTTATCTTCAATGTAATGGGAAGGACCCGTTTGTACTTCAAATCTGTTGGAAATCAATAA |
| Protein Sequence | MTTTTGKRKRSSRADEVAWNKRSRSTASRSLKLNLNRRVRVRPSLQIQTLVATGASEIGVRKGGTISLLGSYSRGSDESQRHTSETMTYKVAMNYYIYVPAEACKYSNKGLCCIWLIYDAQPNGAQPAIKDIFAPESTLVDWPHTWAVSREVCHRFVIKRRYTFTLETNGRIGSDVVPANTAWYPCNKSINFTKFAKGLGVKTEWKNDANGDVGSIKKGALYIAFASGNGVIFNVMGRTRLYFKSVGNQ |
| NCBI Accession | YP_010087228.1 |
|---|---|
| Location | 1441-1851,1944-2666 |
| Protein Name | replication-associated protein |
| Coding Region | ATGAGTGCGGAAAGCATTACCGTGGCTACACCACCCACCACCCAGCAGCCAACCACGGAAGACGTGGTCTTCCAACCAAGTACCACCGTCGACCCAACCCAGCCGCTCCGAAGGTTCGCCTTCAAGTGCGCGAATGTTTTCCTCACCTATTCACGCTGCAACCTCACCCCCCAGGAGGCAGGTGAACATCTCTGGGATCTCGCACGCCCATGGACTCCTGCTTACATTTGTGTTTCTGCTGAGCTTCACCAAGATGGGACCCCTCACCTTCACGCTCTTTTACAGAGCATTCGTCCTATTACAACTAGGGATCCTCTGTTTTTTGACATGCAGATGTATCATCCTAACATCAAAGCTGCTCGCAGTTCAAACAGAACTCGAGACTATATCCTCAAGAATCCGATTTCCACTTTCGAGAGAGGTACATTCATTCCTCGTGGAGGAATGGACCCAGGGTCCAGCGCTGGGAATACCCGTCCTGCAACCCGAGATCAACGCATGAAAGAGATCATGAACTCTTCTACCACGAAGAGTGAATACCTCTCTGCTATCCAAACTGCATTTCCATTCGAGTGGGCCACCAAACTGCATCACTTTGAATACTCAGCCGAAAGGTTGTTTCCAACAGCTGCATCACCCTTCATACCACCTTCGATACCATCACCACCTGATCTCATGTGTCACGAGAGGATTGAGGAATGGCAGTCCGAAAACCTTTTCCAGGGAGATGCTAGCGCAAGGCAGCATCGACCCAGGAGCCTATATATCGTCGGCCCAACACGAACAGGAAAGACAACTTGGGCTCGCAGCATCGAGCCTCTTAGACACAACTACTGGCAATTTACAATAGACTTCCTACGGTACAACAACGAGGCACGTTACAACGTCCTCGACGATATACCGTTCAAGTTCTGTCCGTGTTGGAAGCAGCTAGTAGGTGGCCAGAAGGACTACACCGTCAACCCGAAGTACGCAAGGAAGACACAAATAAAGGGAGGTATCCCTTCCATCATTCTAGTCAATTACGACGAAGATTGGTTGAAGGTGATGACTCCAGCGCAGCTGGACTACTTCTACGACAACTGCGTTGTGTATCAGATGGAACTTCATGAGAAGTTCTACACTCCCTCTTAG |
| Protein Sequence | MSAESITVATPPTTQQPTTEDVVFQPSTTVDPTQPLRRFAFKCANVFLTYSRCNLTPQEAGEHLWDLARPWTPAYICVSAELHQDGTPHLHALLQSIRPITTRDPLFFDMQMYHPNIKAARSSNRTRDYILKNPISTFERGTFIPRGGMDPGSSAGNTRPATRDQRMKEIMNSSTTKSEYLSAIQTAFPFEWATKLHHFEYSAERLFPTAASPFIPPSIPSPPDLMCHERIEEWQSENLFQGDASARQHRPRSLYIVGPTRTGKTTWARSIEPLRHNYWQFTIDFLRYNNEARYNVLDDIPFKFCPCWKQLVGGQKDYTVNPKYARKTQIKGGIPSIILVNYDEDWLKVMTPAQLDYFYDNCVVYQMELHEKFYTPS |
| NCBI Accession | YP_010087229.1 |
|---|---|
| Location | 1725-2666 |
| Protein Name | RepA |
| Coding Region | ATGAGTGCGGAAAGCATTACCGTGGCTACACCACCCACCACCCAGCAGCCAACCACGGAAGACGTGGTCTTCCAACCAAGTACCACCGTCGACCCAACCCAGCCGCTCCGAAGGTTCGCCTTCAAGTGCGCGAATGTTTTCCTCACCTATTCACGCTGCAACCTCACCCCCCAGGAGGCAGGTGAACATCTCTGGGATCTCGCACGCCCATGGACTCCTGCTTACATTTGTGTTTCTGCTGAGCTTCACCAAGATGGGACCCCTCACCTTCACGCTCTTTTACAGAGCATTCGTCCTATTACAACTAGGGATCCTCTGTTTTTTGACATGCAGATGTATCATCCTAACATCAAAGCTGCTCGCAGTTCAAACAGAACTCGAGACTATATCCTCAAGAATCCGATTTCCACTTTCGAGAGAGGTACATTCATTCCTCGTGGAGGAATGGACCCAGGGTCCAGCGCTGGGAATACCCGTCCTGCAACCCGAGATCAACGCATGAAAGAGATCATGAACTCTTCTACCACGAAGAGTGAATACCTCTCTGCTATCCAAACTGCATTTCCATTCGAGTGGGCCACCAAACTGCATCACTTTGAATACTCAGCCGAAAGGTTGTTTCCAACAGCTGCATCACCCTTCATACCACCTTCGATACCATCACCACCTGATCTCATGTGTCACGAGAGGATTGAGGAATGGCAGTCCGAAAACCTTTTCCAGGTACACCCTATGATATACATGCTTGAACATTCTGACTGTCCTAACATCGAGCAAGCTGCTGAAACTCTTAAATGGATGCATGACACCACCAGGGAGATGCTAGCGCAAGGCAGCATCGACCCAGGAGCCTATATATCGTCGGCCCAACACGAACAGGAAAGACAACTTGGGCTCGCAGCATCGAGCCTCTTAGACACAACTACTGGCAATTTACAATAG |
| Protein Sequence | MSAESITVATPPTTQQPTTEDVVFQPSTTVDPTQPLRRFAFKCANVFLTYSRCNLTPQEAGEHLWDLARPWTPAYICVSAELHQDGTPHLHALLQSIRPITTRDPLFFDMQMYHPNIKAARSSNRTRDYILKNPISTFERGTFIPRGGMDPGSSAGNTRPATRDQRMKEIMNSSTTKSEYLSAIQTAFPFEWATKLHHFEYSAERLFPTAASPFIPPSIPSPPDLMCHERIEEWQSENLFQVHPMIYMLEHSDCPNIEQAAETLKWMHDTTREMLAQGSIDPGAYISSAQHEQERQLGLAASSLLDTTTGNLQ |
References More References in PubMed
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Louie R, et al. Plant Dis. 2000 Oct;84(10):1133-1139. doi: 10.1094/PDIS.2000.84.10.1133. PMID: 30831907 |
| 3 |
Maize fine streak virus, a New Leafhopper-Transmitted Rhabdovirus. Redinbaugh MG, et al. Phytopathology. 2002 Nov;92(11):1167-74. doi: 10.1094/PHYTO.2002.92.11.1167. PMID: 18944241 |
| 4 |
Maize Lethal Necrosis: An Emerging, Synergistic Viral Disease. Redinbaugh MG, et al. Annu Rev Virol. 2018 Sep 29;5(1):301-322. doi: 10.1146/annurev-virology-092917-043413. Epub 2018 Jul 30. PMID: 30059641 |
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First Report of Maize chlorotic mottle virus Infecting Sugarcane (Saccharum officinarum). Wang Q, et al. Plant Dis. 2014 Apr;98(4):572. doi: 10.1094/PDIS-07-13-0727-PDN. PMID: 30708716 |
| 7 |
Splicing features in maize streak virus virion- and complementary-sense gene expression. Wright EA, et al. Plant J. 1997 Dec;12(6):1285-97. doi: 10.1046/j.1365-313x.1997.12061285.x. PMID: 9450342 |
| 8 |
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| 10 |
Identification of long intergenic region sequences involved in maize streak virus replication. Willment JA, et al. J Gen Virol. 2007 Jun;88(Pt 6):1831-1841. doi: 10.1099/vir.0.82513-0. PMID: 17485545 |