Chickpea yellows virus
Basic Information
| Genus | Mastrevirus |
|---|---|
| NCBI Assembly | GCF_002825025.1 |
| Isolate | Australia |
| Release date | 2018/8/25 |
| Submitter | Hadfield,J., Thomas,J.E., Schwinghamer,M.W., Kraberger,S., Stainton,D., Dayaram,A., Parry,J.N., Pande,D., Martin,D.P., Varsani,A. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_038478
Gene Information
| NCBI Accession | YP_009506575.1 |
|---|---|
| Location | 1-282 |
| Protein Name | movement protein |
| Coding Region | ATGGCAAGGGGAAAATACCAAATATACCCTCCGGTGGAAGATCATTTCCCAGAAGTGTCCTCGCAGGTTTCTTCTCCTGGTGGACATTCTACAGTTGATTTTGGTAAGGTTGTTGTCGTGCTGATTGTGATACTTGTCGTAGTGGGTTTGTTGTATCTGTCTTATTCGTTGTTCATTAAAGATTGTATTTTGCTTTTTAAAGCGAAAAAGCAGAGAACAACCACCGAAATCGGGTTTGGAAACACCCCTGCTCGAGGTAGCTCAGATCCTCCTCACCCTTAG |
| Protein Sequence | MARGKYQIYPPVEDHFPEVSSQVSSPGGHSTVDFGKVVVVLIVILVVVGLLYLSYSLFIKDCILLFKAKKQRTTTEIGFGNTPARGSSDPPHP |
| NCBI Accession | YP_009506576.1 |
|---|---|
| Location | 293-1039 |
| Protein Name | coat protein |
| Coding Region | ATGAATACTTCGTGGGGAAGGAAGAGAACCCGTACTGGATGGAATAAAGGGAAGGCGTCAAATCAGAAACAGGGTGCCAATAATAGAAGGACAGCTCCCCCTCCTGTTCCAAGGAGGGATTCGCTACAGGTGGCTACGTTTAGTTGGACCAGTACAGGGGCAGGTATAAAGTTTTCTCCTGGTGGGTCTGTTTATTTGATAAACACTTATCCACAGGGAGCGAATGACAATTGTCGTCACACCAACAGCACCTTGACGTACAAGTTGATGACTAAAAATACTGTATTTTTGGATGCCAATTTTTGGCCGTATGTTTGTAAAATACCTGTGGTATTTTGGTTGGTGTACGACAAGTCACCAGGGGCTTCTGTACCTAACACAGGTGATATATTTGATGGGACGTCTATTTTTAAGAACAATCCTAGTGTGTGGACAGTGTCCAGAGCTGTCTGTCATAGGTTTGTTGTGAAGAAGACCTGGACAGTCATATTGGAGGCCAATGGTGTTGATCCAACCAAGAAGGTGTCAGCTAGTTATTATGGTCCGGGGCCTTGCAACCAGTGGAAGTCGTCAAATAAGTTTTTCAAGAGACTTGGTGTCTCAACTGAATGGAAAAATAGTGCTAGTGGGGATGTGGCAGACATAAAAGAAGGTGCACTCTATATTGTTTGTGCACCTTCTCAGGGTTTTGATATATATGTAAATGGTTATTTCCGAGTGTACTTTAAGTCTGTTGGTAATCAATAA |
| Protein Sequence | MNTSWGRKRTRTGWNKGKASNQKQGANNRRTAPPPVPRRDSLQVATFSWTSTGAGIKFSPGGSVYLINTYPQGANDNCRHTNSTLTYKLMTKNTVFLDANFWPYVCKIPVVFWLVYDKSPGASVPNTGDIFDGTSIFKNNPSVWTVSRAVCHRFVVKKTWTVILEANGVDPTKKVSASYYGPGPCNQWKSSNKFFKRLGVSTEWKNSASGDVADIKEGALYIVCAPSQGFDIYVNGYFRVYFKSVGNQ |
| NCBI Accession | YP_009506577.1 |
|---|---|
| Location | 1198-1611,1701-2291 |
| Protein Name | replication associated protein |
| Coding Region | ATGCCTTCACCCTCGAAGAAATCCCCTTCATTCAGACTTCAAACAAAATATGTTTTCCTTACATATCCCCACTGCAGCTCTTCTGCAGAAGGTCTCAGAGACTTTCTCTGGGATAAACTCTCACGTTTTGCTATTTTTTTCATCGCTATTGCTACTGAGCTCTTACCCGCACATCTTCACTGCCTGTTACAACTTGACAAAAGATCTAACATACGTGACCCTTCTTTTTTTGATTTTGAAGGAAATCACCCTAATATCCAACCAGCTAAAAACTCTGAACAAGTCCTTGATTACATATCTAAGGACGAAAACGTCATCACCAAGGGAGAATTCAGAAAACACAAGGTCTCCCCCACAAAAACTGATGAACGATGGAGAAATATCATCAACACTGCAACATCTAAGGAGGAGTATCTGGGGATGATTAAGGAGGAATTCCCACACGAATGGGCAACAAAACTCCAATGGCTAGAATATAGCGCCAATAAACTATTCCCTGAAATTGAACCACCATATCAAAGCCCATTCACCTCCTGCTCCCTCCAGTGTCATGAAAAAATCACTGACTGGCTAAATAGAGACTTATACCTAGAACCAGAGCAGCTCAGACACCGAAGAAGAAGTCTCTACATATGTGGACCAACAAGAACAGGGAAGACCAGTTGGGCCAGAAGCCTCGGACTGCACAACTACTTCAACGGAGGAGTTGACTTCACCACCTACAACCCCTTAGCAACATATAATATAATAGATGATATCCCCTTTAAATTCTGTCCCAACTGGAAACAATTAATAGGTTCACAGTTAGATTTCACTGTGAATCCTAAATATGGGAAAAAAAGAAGGATCAAAGGGGGAATACCATGTATAATATTAGTCAATAATGATGATGATTGGATGAACGATATGTCCCCAGCTCAAAATGATTACTTTCAAGCTAATTGTTGTATTCATTACATGGAAGAGGGGGAAACATTTATTGCTCTTCAATCGTCGAGTCACTAA |
| Protein Sequence | MPSPSKKSPSFRLQTKYVFLTYPHCSSSAEGLRDFLWDKLSRFAIFFIAIATELLPAHLHCLLQLDKRSNIRDPSFFDFEGNHPNIQPAKNSEQVLDYISKDENVITKGEFRKHKVSPTKTDERWRNIINTATSKEEYLGMIKEEFPHEWATKLQWLEYSANKLFPEIEPPYQSPFTSCSLQCHEKITDWLNRDLYLEPEQLRHRRRSLYICGPTRTGKTSWARSLGLHNYFNGGVDFTTYNPLATYNIIDDIPFKFCPNWKQLIGSQLDFTVNPKYGKKRRIKGGIPCIILVNNDDDWMNDMSPAQNDYFQANCCIHYMEEGETFIALQSSSH |
| NCBI Accession | YP_009506578.1 |
|---|---|
| Location | 1470-2291 |
| Protein Name | RepA protein |
| Coding Region | ATGCCTTCACCCTCGAAGAAATCCCCTTCATTCAGACTTCAAACAAAATATGTTTTCCTTACATATCCCCACTGCAGCTCTTCTGCAGAAGGTCTCAGAGACTTTCTCTGGGATAAACTCTCACGTTTTGCTATTTTTTTCATCGCTATTGCTACTGAGCTCTTACCCGCACATCTTCACTGCCTGTTACAACTTGACAAAAGATCTAACATACGTGACCCTTCTTTTTTTGATTTTGAAGGAAATCACCCTAATATCCAACCAGCTAAAAACTCTGAACAAGTCCTTGATTACATATCTAAGGACGAAAACGTCATCACCAAGGGAGAATTCAGAAAACACAAGGTCTCCCCCACAAAAACTGATGAACGATGGAGAAATATCATCAACACTGCAACATCTAAGGAGGAGTATCTGGGGATGATTAAGGAGGAATTCCCACACGAATGGGCAACAAAACTCCAATGGCTAGAATATAGCGCCAATAAACTATTCCCTGAAATTGAACCACCATATCAAAGCCCATTCACCTCCTGCTCCCTCCAGTGTCATGAAAAAATCACTGACTGGCTAAATAGAGACTTATACCTAGTAAGTCTTGATGCATATCAATTAGTCCATCCACACTTAGATTGTCTAAGTGCAGTTAATGATTTGTTTTGGATGGCTGATTACACCAGGAACCAGAGCAGCTCAGACACCGAAGAAGAAGTCTCTACATATGTGGACCAACAAGAACAGGGAAGACCAGTTGGGCCAGAAGCCTCGGACTGCACAACTACTTCAACGGAGGAGTTGACTTCACCACCTACAACCCCTTAG |
| Protein Sequence | MPSPSKKSPSFRLQTKYVFLTYPHCSSSAEGLRDFLWDKLSRFAIFFIAIATELLPAHLHCLLQLDKRSNIRDPSFFDFEGNHPNIQPAKNSEQVLDYISKDENVITKGEFRKHKVSPTKTDERWRNIINTATSKEEYLGMIKEEFPHEWATKLQWLEYSANKLFPEIEPPYQSPFTSCSLQCHEKITDWLNRDLYLVSLDAYQLVHPHLDCLSAVNDLFWMADYTRNQSSSDTEEEVSTYVDQQEQGRPVGPEASDCTTTSTEELTSPPTTP |
References More References in PubMed
| 1 |
Chickpea chlorotic dwarf virus: An Emerging Monopartite Dicot Infecting Mastrevirus. Kanakala S, et al. Viruses. 2018 Dec 21;11(1):5. doi: 10.3390/v11010005. PMID: 30577666 |
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| 2 |
Identification of New Chickpea Virus and Control of Chickpea Virus Disease. Cun Z. Evid Based Complement Alternat Med. 2022 May 28;2022:6465505. doi: 10.1155/2022/6465505. eCollection 2022. PMID: 35668786 |
| 3 |
First Report of Chickpea Chlorotic Dwarf Virus Infecting Spring Chickpea in Syria. Kumari SG, et al. Plant Dis. 2004 Apr;88(4):424. doi: 10.1094/PDIS.2004.88.4.424C. PMID: 30812628 |
| 4 |
Turnip yellows virus variants differ in host range, transmissibility, and virulence. Congdon BS, et al. Arch Virol. 2023 Aug 10;168(9):225. doi: 10.1007/s00705-023-05851-1. PMID: 37561217 |
| 5 |
Chickpea chlorotic stunt virus: a threat to cool-season food legumes. Abraham A, et al. Arch Virol. 2022 Jan;167(1):21-30. doi: 10.1007/s00705-021-05288-4. Epub 2021 Nov 2. PMID: 34729666 |
| 6 |
Reddy MG, et al. 3 Biotech. 2021 Mar;11(3):112. doi: 10.1007/s13205-020-02613-7. Epub 2021 Feb 3. PMID: 33598378 |
| 7 |
Tadesse N, et al. Plant Dis. 1999 Jun;83(6):589. doi: 10.1094/PDIS.1999.83.6.589B. PMID: 30849845 |
| 8 |
Tomato Yellow Leaf Curl Virus Infection in a Monocotyledonous Weed (Eleusine indica). Kil EJ, et al. Plant Pathol J. 2021 Dec;37(6):641-651. doi: 10.5423/PPJ.FT.11.2021.0162. Epub 2021 Dec 1. PMID: 34897255 |
| 9 |
Serological and Molecular Identification of Chickpea chlorotic stunt virus from Chickpea in Iran. Bananej K, et al. Plant Dis. 2010 Jun;94(6):788. doi: 10.1094/PDIS-94-6-0788C. PMID: 30754324 |
| 10 |
Slavíková L, et al. Viruses. 2022 Nov 13;14(11):2511. doi: 10.3390/v14112511. PMID: 36423120 |