Chickpea yellows virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_002825025.1
Isolate Australia
Release date 2018/8/25
Submitter Hadfield,J., Thomas,J.E., Schwinghamer,M.W., Kraberger,S., Stainton,D., Dayaram,A., Parry,J.N., Pande,D., Martin,D.P., Varsani,A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038478
ATGGCAAGGGGAAAATACCAAATATACCCTCCGGTGGAAGATCATTTCCCAGAAGTGTCCTCGCAGGTTTCTTCTCCTGGTGGACATTCTACAGTTGATTTTGGTAAGGTTGTTGTCGTGCTGATTGTGATACTTGTCGTAGTGGGTTTGTTGTATCTGTCTTATTCGTTGTTCATTAAAGATTGTATTTTGCTTTTTAAAGCGAAAAAGCAGAGAACAACCACCGAAATCGGGTTTGGAAACACCCCTGCTCGAGGTAGCTCAGATCCTCCTCACCCTTAGGTCAAGCACTATGAATACTTCGTGGGGAAGGAAGAGAACCCGTACTGGATGGAATAAAGGGAAGGCGTCAAATCAGAAACAGGGTGCCAATAATAGAAGGACAGCTCCCCCTCCTGTTCCAAGGAGGGATTCGCTACAGGTGGCTACGTTTAGTTGGACCAGTACAGGGGCAGGTATAAAGTTTTCTCCTGGTGGGTCTGTTTATTTGATAAACACTTATCCACAGGGAGCGAATGACAATTGTCGTCACACCAACAGCACCTTGACGTACAAGTTGATGACTAAAAATACTGTATTTTTGGATGCCAATTTTTGGCCGTATGTTTGTAAAATACCTGTGGTATTTTGGTTGGTGTACGACAAGTCACCAGGGGCTTCTGTACCTAACACAGGTGATATATTTGATGGGACGTCTATTTTTAAGAACAATCCTAGTGTGTGGACAGTGTCCAGAGCTGTCTGTCATAGGTTTGTTGTGAAGAAGACCTGGACAGTCATATTGGAGGCCAATGGTGTTGATCCAACCAAGAAGGTGTCAGCTAGTTATTATGGTCCGGGGCCTTGCAACCAGTGGAAGTCGTCAAATAAGTTTTTCAAGAGACTTGGTGTCTCAACTGAATGGAAAAATAGTGCTAGTGGGGATGTGGCAGACATAAAAGAAGGTGCACTCTATATTGTTTGTGCACCTTCTCAGGGTTTTGATATATATGTAAATGGTTATTTCCGAGTGTACTTTAAGTCTGTTGGTAATCAATAAAAACATTTATTTAATGTTTAGATGTCATATTTATGAGCTTCAATATAGAGAAATTTTATTCATTAATAAATCACACTCAAATACATTACAAACTTTTACAACAAAATTAACAACCCAGTACATTAATCTTATATTCCCTCGATTGAGGAGAGGCACGTTTAGTGACTCGACGATTGAAGAGCAATAAATGTTTCCCCCTCTTCCATGTAATGAATACAACAATTAGCTTGAAAGTAATCATTTTGAGCTGGGGACATATCGTTCATCCAATCATCATCATTATTGACTAATATTATACATGGTATTCCCCCTTTGATCCTTCTTTTTTTCCCATATTTAGGATTCACAGTGAAATCTAACTGTGAACCTATTAATTGTTTCCAGTTGGGACAGAATTTAAAGGGGATATCATCTATTATATTATATGTTGCTAAGGGGTTGTAGGTGGTGAAGTCAACTCCTCCGTTGAAGTAGTTGTGCAGTCCGAGGCTTCTGGCCCAACTGGTCTTCCCTGTTCTTGTTGGTCCACATATGTAGAGACTTCTTCTTCGGTGTCTGAGCTGCTCTGGTTCCTGGTGTAATCAGCCATCCAAAACAAATCATTAACTGCACTTAGACAATCTAAGTGTGGATGGACTAATTGATATGCATCAAGACTTACTAGGTATAAGTCTCTATTTAGCCAGTCAGTGATTTTTTCATGACACTGGAGGGAGCAGGAGGTGAATGGGCTTTGATATGGTGGTTCAATTTCAGGGAATAGTTTATTGGCGCTATATTCTAGCCATTGGAGTTTTGTTGCCCATTCGTGTGGGAATTCCTCCTTAATCATCCCCAGATACTCCTCCTTAGATGTTGCAGTGTTGATGATATTTCTCCATCGTTCATCAGTTTTTGTGGGGGAGACCTTGTGTTTTCTGAATTCTCCCTTGGTGATGACGTTTTCGTCCTTAGATATGTAATCAAGGACTTGTTCAGAGTTTTTAGCTGGTTGGATATTAGGGTGATTTCCTTCAAAATCAAAAAAAGAAGGGTCACGTATGTTAGATCTTTTGTCAAGTTGTAACAGGCAGTGAAGATGTGCGGGTAAGAGCTCAGTAGCAATAGCGATGAAAAAAATAGCAAAACGTGAGAGTTTATCCCAGAGAAAGTCTCTGAGACCTTCTGCAGAAGAGCTGCAGTGGGGATATGTAAGGAAAACATATTTTGTTTGAAGTCTGAATGAAGGGGATTTCTTCGAGGGTGAAGGCATGTTATGGCTCATACAGTGTTTCACAAACTCTATGCTTAACCAGTGAGTGAGCCAGTGAGTTATATAAATAACGTTTTGCTTTCCAATAAAAAAACGACACCTGTGGAGACAGGCACACGTGAAAGCACTCACTGAAATTTAATATTACCAGTGAGTGCTTTACACGTGTCGCGAGCCGATAGGCGAGCGTAAAGGTTACTTTTGAAAAAGGAAGATTCCCGCCCAATAATTCAATTATAAATAGACGGGTGTTTTGGCATGTAGTG

Gene Information

NCBI Accession YP_009506575.1
Location 1-282
Protein Name movement protein
Coding Region ATGGCAAGGGGAAAATACCAAATATACCCTCCGGTGGAAGATCATTTCCCAGAAGTGTCCTCGCAGGTTTCTTCTCCTGGTGGACATTCTACAGTTGATTTTGGTAAGGTTGTTGTCGTGCTGATTGTGATACTTGTCGTAGTGGGTTTGTTGTATCTGTCTTATTCGTTGTTCATTAAAGATTGTATTTTGCTTTTTAAAGCGAAAAAGCAGAGAACAACCACCGAAATCGGGTTTGGAAACACCCCTGCTCGAGGTAGCTCAGATCCTCCTCACCCTTAG
Protein Sequence MARGKYQIYPPVEDHFPEVSSQVSSPGGHSTVDFGKVVVVLIVILVVVGLLYLSYSLFIKDCILLFKAKKQRTTTEIGFGNTPARGSSDPPHP

NCBI Accession YP_009506576.1
Location 293-1039
Protein Name coat protein
Coding Region ATGAATACTTCGTGGGGAAGGAAGAGAACCCGTACTGGATGGAATAAAGGGAAGGCGTCAAATCAGAAACAGGGTGCCAATAATAGAAGGACAGCTCCCCCTCCTGTTCCAAGGAGGGATTCGCTACAGGTGGCTACGTTTAGTTGGACCAGTACAGGGGCAGGTATAAAGTTTTCTCCTGGTGGGTCTGTTTATTTGATAAACACTTATCCACAGGGAGCGAATGACAATTGTCGTCACACCAACAGCACCTTGACGTACAAGTTGATGACTAAAAATACTGTATTTTTGGATGCCAATTTTTGGCCGTATGTTTGTAAAATACCTGTGGTATTTTGGTTGGTGTACGACAAGTCACCAGGGGCTTCTGTACCTAACACAGGTGATATATTTGATGGGACGTCTATTTTTAAGAACAATCCTAGTGTGTGGACAGTGTCCAGAGCTGTCTGTCATAGGTTTGTTGTGAAGAAGACCTGGACAGTCATATTGGAGGCCAATGGTGTTGATCCAACCAAGAAGGTGTCAGCTAGTTATTATGGTCCGGGGCCTTGCAACCAGTGGAAGTCGTCAAATAAGTTTTTCAAGAGACTTGGTGTCTCAACTGAATGGAAAAATAGTGCTAGTGGGGATGTGGCAGACATAAAAGAAGGTGCACTCTATATTGTTTGTGCACCTTCTCAGGGTTTTGATATATATGTAAATGGTTATTTCCGAGTGTACTTTAAGTCTGTTGGTAATCAATAA
Protein Sequence MNTSWGRKRTRTGWNKGKASNQKQGANNRRTAPPPVPRRDSLQVATFSWTSTGAGIKFSPGGSVYLINTYPQGANDNCRHTNSTLTYKLMTKNTVFLDANFWPYVCKIPVVFWLVYDKSPGASVPNTGDIFDGTSIFKNNPSVWTVSRAVCHRFVVKKTWTVILEANGVDPTKKVSASYYGPGPCNQWKSSNKFFKRLGVSTEWKNSASGDVADIKEGALYIVCAPSQGFDIYVNGYFRVYFKSVGNQ

NCBI Accession YP_009506577.1
Location 1198-1611,1701-2291
Protein Name replication associated protein
Coding Region ATGCCTTCACCCTCGAAGAAATCCCCTTCATTCAGACTTCAAACAAAATATGTTTTCCTTACATATCCCCACTGCAGCTCTTCTGCAGAAGGTCTCAGAGACTTTCTCTGGGATAAACTCTCACGTTTTGCTATTTTTTTCATCGCTATTGCTACTGAGCTCTTACCCGCACATCTTCACTGCCTGTTACAACTTGACAAAAGATCTAACATACGTGACCCTTCTTTTTTTGATTTTGAAGGAAATCACCCTAATATCCAACCAGCTAAAAACTCTGAACAAGTCCTTGATTACATATCTAAGGACGAAAACGTCATCACCAAGGGAGAATTCAGAAAACACAAGGTCTCCCCCACAAAAACTGATGAACGATGGAGAAATATCATCAACACTGCAACATCTAAGGAGGAGTATCTGGGGATGATTAAGGAGGAATTCCCACACGAATGGGCAACAAAACTCCAATGGCTAGAATATAGCGCCAATAAACTATTCCCTGAAATTGAACCACCATATCAAAGCCCATTCACCTCCTGCTCCCTCCAGTGTCATGAAAAAATCACTGACTGGCTAAATAGAGACTTATACCTAGAACCAGAGCAGCTCAGACACCGAAGAAGAAGTCTCTACATATGTGGACCAACAAGAACAGGGAAGACCAGTTGGGCCAGAAGCCTCGGACTGCACAACTACTTCAACGGAGGAGTTGACTTCACCACCTACAACCCCTTAGCAACATATAATATAATAGATGATATCCCCTTTAAATTCTGTCCCAACTGGAAACAATTAATAGGTTCACAGTTAGATTTCACTGTGAATCCTAAATATGGGAAAAAAAGAAGGATCAAAGGGGGAATACCATGTATAATATTAGTCAATAATGATGATGATTGGATGAACGATATGTCCCCAGCTCAAAATGATTACTTTCAAGCTAATTGTTGTATTCATTACATGGAAGAGGGGGAAACATTTATTGCTCTTCAATCGTCGAGTCACTAA
Protein Sequence MPSPSKKSPSFRLQTKYVFLTYPHCSSSAEGLRDFLWDKLSRFAIFFIAIATELLPAHLHCLLQLDKRSNIRDPSFFDFEGNHPNIQPAKNSEQVLDYISKDENVITKGEFRKHKVSPTKTDERWRNIINTATSKEEYLGMIKEEFPHEWATKLQWLEYSANKLFPEIEPPYQSPFTSCSLQCHEKITDWLNRDLYLEPEQLRHRRRSLYICGPTRTGKTSWARSLGLHNYFNGGVDFTTYNPLATYNIIDDIPFKFCPNWKQLIGSQLDFTVNPKYGKKRRIKGGIPCIILVNNDDDWMNDMSPAQNDYFQANCCIHYMEEGETFIALQSSSH

NCBI Accession YP_009506578.1
Location 1470-2291
Protein Name RepA protein
Coding Region ATGCCTTCACCCTCGAAGAAATCCCCTTCATTCAGACTTCAAACAAAATATGTTTTCCTTACATATCCCCACTGCAGCTCTTCTGCAGAAGGTCTCAGAGACTTTCTCTGGGATAAACTCTCACGTTTTGCTATTTTTTTCATCGCTATTGCTACTGAGCTCTTACCCGCACATCTTCACTGCCTGTTACAACTTGACAAAAGATCTAACATACGTGACCCTTCTTTTTTTGATTTTGAAGGAAATCACCCTAATATCCAACCAGCTAAAAACTCTGAACAAGTCCTTGATTACATATCTAAGGACGAAAACGTCATCACCAAGGGAGAATTCAGAAAACACAAGGTCTCCCCCACAAAAACTGATGAACGATGGAGAAATATCATCAACACTGCAACATCTAAGGAGGAGTATCTGGGGATGATTAAGGAGGAATTCCCACACGAATGGGCAACAAAACTCCAATGGCTAGAATATAGCGCCAATAAACTATTCCCTGAAATTGAACCACCATATCAAAGCCCATTCACCTCCTGCTCCCTCCAGTGTCATGAAAAAATCACTGACTGGCTAAATAGAGACTTATACCTAGTAAGTCTTGATGCATATCAATTAGTCCATCCACACTTAGATTGTCTAAGTGCAGTTAATGATTTGTTTTGGATGGCTGATTACACCAGGAACCAGAGCAGCTCAGACACCGAAGAAGAAGTCTCTACATATGTGGACCAACAAGAACAGGGAAGACCAGTTGGGCCAGAAGCCTCGGACTGCACAACTACTTCAACGGAGGAGTTGACTTCACCACCTACAACCCCTTAG
Protein Sequence MPSPSKKSPSFRLQTKYVFLTYPHCSSSAEGLRDFLWDKLSRFAIFFIAIATELLPAHLHCLLQLDKRSNIRDPSFFDFEGNHPNIQPAKNSEQVLDYISKDENVITKGEFRKHKVSPTKTDERWRNIINTATSKEEYLGMIKEEFPHEWATKLQWLEYSANKLFPEIEPPYQSPFTSCSLQCHEKITDWLNRDLYLVSLDAYQLVHPHLDCLSAVNDLFWMADYTRNQSSSDTEEEVSTYVDQQEQGRPVGPEASDCTTTSTEELTSPPTTP

References More References in PubMed

1

Identification of New Chickpea Virus and Control of Chickpea Virus Disease.

Cun Z.  Evid Based Complement Alternat Med. 2022 May 28;2022:6465505. doi: 10.1155/2022/6465505. eCollection 2022.

PMID: 35668786

2

Chickpea chlorotic stunt virus: a threat to cool-season food legumes.

Abraham A, et al.  Arch Virol. 2022 Jan;167(1):21-30. doi: 10.1007/s00705-021-05288-4. Epub 2021 Nov 2.

PMID: 34729666

3

Chickpea chlorotic dwarf virus: An Emerging Monopartite Dicot Infecting Mastrevirus.

Kanakala S, et al.  Viruses. 2018 Dec 21;11(1):5. doi: 10.3390/v11010005.

PMID: 30577666

4

First Report of Soybean Dwarf Virus Infecting Lentil and Beet Western Yellows Virus Infecting Lentil and Chickpea Crops in Ethiopia.

Tadesse N, et al.  Plant Dis. 1999 Jun;83(6):589. doi: 10.1094/PDIS.1999.83.6.589B.

PMID: 30849845

5

First Record of Faba Bean Necrotic Yellows Virus and Beet Western Yellows Luteovirus Affecting Lentil and Chickpea in Pakistan.

Makkouk KM, et al.  Plant Dis. 1998 May;82(5):591. doi: 10.1094/PDIS.1998.82.5.591D.

PMID: 30857001

6

Turnip yellows virus variants differ in host range, transmissibility, and virulence.

Congdon BS, et al.  Arch Virol. 2023 Aug 10;168(9):225. doi: 10.1007/s00705-023-05851-1.

PMID: 37561217

7

First Report of Chickpea Chlorotic Dwarf Virus Infecting Spring Chickpea in Syria.

Kumari SG, et al.  Plant Dis. 2004 Apr;88(4):424. doi: 10.1094/PDIS.2004.88.4.424C.

PMID: 30812628

8

First Report of Cucurbit aphid-borne yellows virus Affecting Chickpea (Cicer arietinum L.) in Sudan.

Kumari SG, et al.  Plant Dis. 2018 Jul 31:PDIS02180347PDN. doi: 10.1094/PDIS-02-18-0347-PDN. Online ahead of print.

PMID: 30064346

9

Serological and Molecular Identification of Chickpea chlorotic stunt virus from Chickpea in Iran.

Bananej K, et al.  Plant Dis. 2010 Jun;94(6):788. doi: 10.1094/PDIS-94-6-0788C.

PMID: 30754324

10

Weed Hosts Represent an Important Reservoir of Turnip Yellows Virus and a Possible Source of Virus Introduction into Oilseed Rape Crop.

Slavíková L, et al.  Viruses. 2022 Nov 13;14(11):2511. doi: 10.3390/v14112511.

PMID: 36423120