Chickpea yellows virus

Basic Information

Genus Mastrevirus
NCBI Assembly GCF_002825025.1
Isolate Australia
Release date 2018/8/25
Submitter Hadfield,J., Thomas,J.E., Schwinghamer,M.W., Kraberger,S., Stainton,D., Dayaram,A., Parry,J.N., Pande,D., Martin,D.P., Varsani,A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_038478
ATGGCAAGGGGAAAATACCAAATATACCCTCCGGTGGAAGATCATTTCCCAGAAGTGTCCTCGCAGGTTTCTTCTCCTGGTGGACATTCTACAGTTGATTTTGGTAAGGTTGTTGTCGTGCTGATTGTGATACTTGTCGTAGTGGGTTTGTTGTATCTGTCTTATTCGTTGTTCATTAAAGATTGTATTTTGCTTTTTAAAGCGAAAAAGCAGAGAACAACCACCGAAATCGGGTTTGGAAACACCCCTGCTCGAGGTAGCTCAGATCCTCCTCACCCTTAGGTCAAGCACTATGAATACTTCGTGGGGAAGGAAGAGAACCCGTACTGGATGGAATAAAGGGAAGGCGTCAAATCAGAAACAGGGTGCCAATAATAGAAGGACAGCTCCCCCTCCTGTTCCAAGGAGGGATTCGCTACAGGTGGCTACGTTTAGTTGGACCAGTACAGGGGCAGGTATAAAGTTTTCTCCTGGTGGGTCTGTTTATTTGATAAACACTTATCCACAGGGAGCGAATGACAATTGTCGTCACACCAACAGCACCTTGACGTACAAGTTGATGACTAAAAATACTGTATTTTTGGATGCCAATTTTTGGCCGTATGTTTGTAAAATACCTGTGGTATTTTGGTTGGTGTACGACAAGTCACCAGGGGCTTCTGTACCTAACACAGGTGATATATTTGATGGGACGTCTATTTTTAAGAACAATCCTAGTGTGTGGACAGTGTCCAGAGCTGTCTGTCATAGGTTTGTTGTGAAGAAGACCTGGACAGTCATATTGGAGGCCAATGGTGTTGATCCAACCAAGAAGGTGTCAGCTAGTTATTATGGTCCGGGGCCTTGCAACCAGTGGAAGTCGTCAAATAAGTTTTTCAAGAGACTTGGTGTCTCAACTGAATGGAAAAATAGTGCTAGTGGGGATGTGGCAGACATAAAAGAAGGTGCACTCTATATTGTTTGTGCACCTTCTCAGGGTTTTGATATATATGTAAATGGTTATTTCCGAGTGTACTTTAAGTCTGTTGGTAATCAATAAAAACATTTATTTAATGTTTAGATGTCATATTTATGAGCTTCAATATAGAGAAATTTTATTCATTAATAAATCACACTCAAATACATTACAAACTTTTACAACAAAATTAACAACCCAGTACATTAATCTTATATTCCCTCGATTGAGGAGAGGCACGTTTAGTGACTCGACGATTGAAGAGCAATAAATGTTTCCCCCTCTTCCATGTAATGAATACAACAATTAGCTTGAAAGTAATCATTTTGAGCTGGGGACATATCGTTCATCCAATCATCATCATTATTGACTAATATTATACATGGTATTCCCCCTTTGATCCTTCTTTTTTTCCCATATTTAGGATTCACAGTGAAATCTAACTGTGAACCTATTAATTGTTTCCAGTTGGGACAGAATTTAAAGGGGATATCATCTATTATATTATATGTTGCTAAGGGGTTGTAGGTGGTGAAGTCAACTCCTCCGTTGAAGTAGTTGTGCAGTCCGAGGCTTCTGGCCCAACTGGTCTTCCCTGTTCTTGTTGGTCCACATATGTAGAGACTTCTTCTTCGGTGTCTGAGCTGCTCTGGTTCCTGGTGTAATCAGCCATCCAAAACAAATCATTAACTGCACTTAGACAATCTAAGTGTGGATGGACTAATTGATATGCATCAAGACTTACTAGGTATAAGTCTCTATTTAGCCAGTCAGTGATTTTTTCATGACACTGGAGGGAGCAGGAGGTGAATGGGCTTTGATATGGTGGTTCAATTTCAGGGAATAGTTTATTGGCGCTATATTCTAGCCATTGGAGTTTTGTTGCCCATTCGTGTGGGAATTCCTCCTTAATCATCCCCAGATACTCCTCCTTAGATGTTGCAGTGTTGATGATATTTCTCCATCGTTCATCAGTTTTTGTGGGGGAGACCTTGTGTTTTCTGAATTCTCCCTTGGTGATGACGTTTTCGTCCTTAGATATGTAATCAAGGACTTGTTCAGAGTTTTTAGCTGGTTGGATATTAGGGTGATTTCCTTCAAAATCAAAAAAAGAAGGGTCACGTATGTTAGATCTTTTGTCAAGTTGTAACAGGCAGTGAAGATGTGCGGGTAAGAGCTCAGTAGCAATAGCGATGAAAAAAATAGCAAAACGTGAGAGTTTATCCCAGAGAAAGTCTCTGAGACCTTCTGCAGAAGAGCTGCAGTGGGGATATGTAAGGAAAACATATTTTGTTTGAAGTCTGAATGAAGGGGATTTCTTCGAGGGTGAAGGCATGTTATGGCTCATACAGTGTTTCACAAACTCTATGCTTAACCAGTGAGTGAGCCAGTGAGTTATATAAATAACGTTTTGCTTTCCAATAAAAAAACGACACCTGTGGAGACAGGCACACGTGAAAGCACTCACTGAAATTTAATATTACCAGTGAGTGCTTTACACGTGTCGCGAGCCGATAGGCGAGCGTAAAGGTTACTTTTGAAAAAGGAAGATTCCCGCCCAATAATTCAATTATAAATAGACGGGTGTTTTGGCATGTAGTG

Gene Information

NCBI Accession YP_009506575.1
Location 1-282
Protein Name movement protein
Coding Region ATGGCAAGGGGAAAATACCAAATATACCCTCCGGTGGAAGATCATTTCCCAGAAGTGTCCTCGCAGGTTTCTTCTCCTGGTGGACATTCTACAGTTGATTTTGGTAAGGTTGTTGTCGTGCTGATTGTGATACTTGTCGTAGTGGGTTTGTTGTATCTGTCTTATTCGTTGTTCATTAAAGATTGTATTTTGCTTTTTAAAGCGAAAAAGCAGAGAACAACCACCGAAATCGGGTTTGGAAACACCCCTGCTCGAGGTAGCTCAGATCCTCCTCACCCTTAG
Protein Sequence MARGKYQIYPPVEDHFPEVSSQVSSPGGHSTVDFGKVVVVLIVILVVVGLLYLSYSLFIKDCILLFKAKKQRTTTEIGFGNTPARGSSDPPHP

NCBI Accession YP_009506576.1
Location 293-1039
Protein Name coat protein
Coding Region ATGAATACTTCGTGGGGAAGGAAGAGAACCCGTACTGGATGGAATAAAGGGAAGGCGTCAAATCAGAAACAGGGTGCCAATAATAGAAGGACAGCTCCCCCTCCTGTTCCAAGGAGGGATTCGCTACAGGTGGCTACGTTTAGTTGGACCAGTACAGGGGCAGGTATAAAGTTTTCTCCTGGTGGGTCTGTTTATTTGATAAACACTTATCCACAGGGAGCGAATGACAATTGTCGTCACACCAACAGCACCTTGACGTACAAGTTGATGACTAAAAATACTGTATTTTTGGATGCCAATTTTTGGCCGTATGTTTGTAAAATACCTGTGGTATTTTGGTTGGTGTACGACAAGTCACCAGGGGCTTCTGTACCTAACACAGGTGATATATTTGATGGGACGTCTATTTTTAAGAACAATCCTAGTGTGTGGACAGTGTCCAGAGCTGTCTGTCATAGGTTTGTTGTGAAGAAGACCTGGACAGTCATATTGGAGGCCAATGGTGTTGATCCAACCAAGAAGGTGTCAGCTAGTTATTATGGTCCGGGGCCTTGCAACCAGTGGAAGTCGTCAAATAAGTTTTTCAAGAGACTTGGTGTCTCAACTGAATGGAAAAATAGTGCTAGTGGGGATGTGGCAGACATAAAAGAAGGTGCACTCTATATTGTTTGTGCACCTTCTCAGGGTTTTGATATATATGTAAATGGTTATTTCCGAGTGTACTTTAAGTCTGTTGGTAATCAATAA
Protein Sequence MNTSWGRKRTRTGWNKGKASNQKQGANNRRTAPPPVPRRDSLQVATFSWTSTGAGIKFSPGGSVYLINTYPQGANDNCRHTNSTLTYKLMTKNTVFLDANFWPYVCKIPVVFWLVYDKSPGASVPNTGDIFDGTSIFKNNPSVWTVSRAVCHRFVVKKTWTVILEANGVDPTKKVSASYYGPGPCNQWKSSNKFFKRLGVSTEWKNSASGDVADIKEGALYIVCAPSQGFDIYVNGYFRVYFKSVGNQ

NCBI Accession YP_009506577.1
Location 1198-1611,1701-2291
Protein Name replication associated protein
Coding Region ATGCCTTCACCCTCGAAGAAATCCCCTTCATTCAGACTTCAAACAAAATATGTTTTCCTTACATATCCCCACTGCAGCTCTTCTGCAGAAGGTCTCAGAGACTTTCTCTGGGATAAACTCTCACGTTTTGCTATTTTTTTCATCGCTATTGCTACTGAGCTCTTACCCGCACATCTTCACTGCCTGTTACAACTTGACAAAAGATCTAACATACGTGACCCTTCTTTTTTTGATTTTGAAGGAAATCACCCTAATATCCAACCAGCTAAAAACTCTGAACAAGTCCTTGATTACATATCTAAGGACGAAAACGTCATCACCAAGGGAGAATTCAGAAAACACAAGGTCTCCCCCACAAAAACTGATGAACGATGGAGAAATATCATCAACACTGCAACATCTAAGGAGGAGTATCTGGGGATGATTAAGGAGGAATTCCCACACGAATGGGCAACAAAACTCCAATGGCTAGAATATAGCGCCAATAAACTATTCCCTGAAATTGAACCACCATATCAAAGCCCATTCACCTCCTGCTCCCTCCAGTGTCATGAAAAAATCACTGACTGGCTAAATAGAGACTTATACCTAGAACCAGAGCAGCTCAGACACCGAAGAAGAAGTCTCTACATATGTGGACCAACAAGAACAGGGAAGACCAGTTGGGCCAGAAGCCTCGGACTGCACAACTACTTCAACGGAGGAGTTGACTTCACCACCTACAACCCCTTAGCAACATATAATATAATAGATGATATCCCCTTTAAATTCTGTCCCAACTGGAAACAATTAATAGGTTCACAGTTAGATTTCACTGTGAATCCTAAATATGGGAAAAAAAGAAGGATCAAAGGGGGAATACCATGTATAATATTAGTCAATAATGATGATGATTGGATGAACGATATGTCCCCAGCTCAAAATGATTACTTTCAAGCTAATTGTTGTATTCATTACATGGAAGAGGGGGAAACATTTATTGCTCTTCAATCGTCGAGTCACTAA
Protein Sequence MPSPSKKSPSFRLQTKYVFLTYPHCSSSAEGLRDFLWDKLSRFAIFFIAIATELLPAHLHCLLQLDKRSNIRDPSFFDFEGNHPNIQPAKNSEQVLDYISKDENVITKGEFRKHKVSPTKTDERWRNIINTATSKEEYLGMIKEEFPHEWATKLQWLEYSANKLFPEIEPPYQSPFTSCSLQCHEKITDWLNRDLYLEPEQLRHRRRSLYICGPTRTGKTSWARSLGLHNYFNGGVDFTTYNPLATYNIIDDIPFKFCPNWKQLIGSQLDFTVNPKYGKKRRIKGGIPCIILVNNDDDWMNDMSPAQNDYFQANCCIHYMEEGETFIALQSSSH

NCBI Accession YP_009506578.1
Location 1470-2291
Protein Name RepA protein
Coding Region ATGCCTTCACCCTCGAAGAAATCCCCTTCATTCAGACTTCAAACAAAATATGTTTTCCTTACATATCCCCACTGCAGCTCTTCTGCAGAAGGTCTCAGAGACTTTCTCTGGGATAAACTCTCACGTTTTGCTATTTTTTTCATCGCTATTGCTACTGAGCTCTTACCCGCACATCTTCACTGCCTGTTACAACTTGACAAAAGATCTAACATACGTGACCCTTCTTTTTTTGATTTTGAAGGAAATCACCCTAATATCCAACCAGCTAAAAACTCTGAACAAGTCCTTGATTACATATCTAAGGACGAAAACGTCATCACCAAGGGAGAATTCAGAAAACACAAGGTCTCCCCCACAAAAACTGATGAACGATGGAGAAATATCATCAACACTGCAACATCTAAGGAGGAGTATCTGGGGATGATTAAGGAGGAATTCCCACACGAATGGGCAACAAAACTCCAATGGCTAGAATATAGCGCCAATAAACTATTCCCTGAAATTGAACCACCATATCAAAGCCCATTCACCTCCTGCTCCCTCCAGTGTCATGAAAAAATCACTGACTGGCTAAATAGAGACTTATACCTAGTAAGTCTTGATGCATATCAATTAGTCCATCCACACTTAGATTGTCTAAGTGCAGTTAATGATTTGTTTTGGATGGCTGATTACACCAGGAACCAGAGCAGCTCAGACACCGAAGAAGAAGTCTCTACATATGTGGACCAACAAGAACAGGGAAGACCAGTTGGGCCAGAAGCCTCGGACTGCACAACTACTTCAACGGAGGAGTTGACTTCACCACCTACAACCCCTTAG
Protein Sequence MPSPSKKSPSFRLQTKYVFLTYPHCSSSAEGLRDFLWDKLSRFAIFFIAIATELLPAHLHCLLQLDKRSNIRDPSFFDFEGNHPNIQPAKNSEQVLDYISKDENVITKGEFRKHKVSPTKTDERWRNIINTATSKEEYLGMIKEEFPHEWATKLQWLEYSANKLFPEIEPPYQSPFTSCSLQCHEKITDWLNRDLYLVSLDAYQLVHPHLDCLSAVNDLFWMADYTRNQSSSDTEEEVSTYVDQQEQGRPVGPEASDCTTTSTEELTSPPTTP

References More References in PubMed

1

Identification of New Chickpea Virus and Control of Chickpea Virus Disease.

Cun Z.  Evid Based Complement Alternat Med. 2022 May 28;2022:6465505. doi: 10.1155/2022/6465505. eCollection 2022.

PMID: 35668786
2

Chickpea chlorotic stunt virus: a threat to cool-season food legumes.

Abraham A, et al.  Arch Virol. 2022 Jan;167(1):21-30. doi: 10.1007/s00705-021-05288-4. Epub 2021 Nov 2.

PMID: 34729666
3

Chickpea chlorotic dwarf virus: An Emerging Monopartite Dicot Infecting Mastrevirus.

Kanakala S, et al.  Viruses. 2018 Dec 21;11(1):5. doi: 10.3390/v11010005.

PMID: 30577666
4

First Record of Faba Bean Necrotic Yellows Virus and Beet Western Yellows Luteovirus Affecting Lentil and Chickpea in Pakistan.

Makkouk KM, et al.  Plant Dis. 1998 May;82(5):591. doi: 10.1094/PDIS.1998.82.5.591D.

PMID: 30857001
5

Turnip yellows virus variants differ in host range, transmissibility, and virulence.

Congdon BS, et al.  Arch Virol. 2023 Aug 10;168(9):225. doi: 10.1007/s00705-023-05851-1.

PMID: 37561217
6

First Report of Soybean Dwarf Virus Infecting Lentil and Beet Western Yellows Virus Infecting Lentil and Chickpea Crops in Ethiopia.

Tadesse N, et al.  Plant Dis. 1999 Jun;83(6):589. doi: 10.1094/PDIS.1999.83.6.589B.

PMID: 30849845
7

First Report of Chickpea Chlorotic Dwarf Virus Infecting Spring Chickpea in Syria.

Kumari SG, et al.  Plant Dis. 2004 Apr;88(4):424. doi: 10.1094/PDIS.2004.88.4.424C.

PMID: 30812628
8

Serological and Molecular Identification of Chickpea chlorotic stunt virus from Chickpea in Iran.

Bananej K, et al.  Plant Dis. 2010 Jun;94(6):788. doi: 10.1094/PDIS-94-6-0788C.

PMID: 30754324
9

Weed Hosts Represent an Important Reservoir of Turnip Yellows Virus and a Possible Source of Virus Introduction into Oilseed Rape Crop.

Slavíková L, et al.  Viruses. 2022 Nov 13;14(11):2511. doi: 10.3390/v14112511.

PMID: 36423120
10

Molecular characterization of chickpea chlorotic dwarf virus and peanut witches' broom phytoplasma associated with chickpea stunt disease and identification of new host crops and leafhopper vectors in India.

Reddy MG, et al.  3 Biotech. 2021 Mar;11(3):112. doi: 10.1007/s13205-020-02613-7. Epub 2021 Feb 3.

PMID: 33598378