Chickpea redleaf virus 2

Basic Information

Genus Mastrevirus
NCBI Assembly GCF_018587145.1
Isolate Australia
Release date 2021/6/1
Submitter Filardo,F.F., Sharman,M.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_055579
ATGTTTCCCTCCAAATACCAAGTATTTCCCTCTGAGTTAAATTACTCTTATACCCCTGTTGAAGCGGGAGACTCTCAATTTCCTGCTAAAACAGGTGATTCTGGGGAGCACGTTTTCTCTAAAGTTGTCGTTGCTCTTATCATAATACTGTTCGCAGTGGGAATCATTTATCTTTCTTATGTTTTATTTTTAAAAGATTTGATTCTACTGCTAAAAGCTAAAAAACAGAGAACGACAACTGAGATAGGGTTTGGTAATACCCCTGCTAGACCGGGTTCTCAACCGCGTCAGGATGCCGGGACCCTTTAAAGGAAACGTGTACAGGAGGAGGCGAGGAAGGAATTCTAGGGTTTATGATGCCCTAGGTGTGAATTCCCAACGGGAGCTTGAGAGGCTGGTCAACGCTCCATCAAGGTCTATTCCCAATAGACGAGAGTCGTTGCAGGTGGCTACTTTCACCTGGACTAGTACTGGTGCTGGTGTTAAGTTTTCTGCTGGTGGTGCGGCCTATCTATTAAGTAATTTTCCACAGGGTGCCAACGACAATTGTAGACACACCAACAAGACTATCTTGTACAAGATTATGTGCAAGAACAGTGTGTACTTGGACTCCTCTCATTACCCTAAGGTGTTCAGGTGTCCTTTTACGTTTTGGTTGGTGTACGACAAATCACCTGGTTCAAGTGTTCCCAGTACAGGGGATATTTTTGAAGGTCCAGCTCTGTTTCCTAACAACCCTAAGGTGTGGACAGTTTCAAGGGCAGCTTGCCATCGCTTTGTGGTCAAGAAGACGTGGACAGTCATGATTGAGAGCAACGGTATAGACCCAGCTAAGGCGCAGAGTTCGAGTTATTATGGTCCTGGTCCGTGCAACCAGGTGAAGTTTGTCAACAAATTTTTCAAGAGATTGGGAGTTACAACGGAGTGGAAGAACAGTTCTACTGGTGATGTAGGTGACATAAAAGAAGGGGCTCTGTACATATGTTGTGCCCCTTCTCAGAAATCTGATGTATATGTAAATGGATATTTCCGAGTGTATTTCAAGTCCGTTGGAAATCAATAAAAAAGATTTTATTATGATATCATATATTGTTTGAATCCTAAGAAAAATTACAACTTATACATTACACAACAAAAATACAACAACCATGAAAAACATAAAACACACCCAAAAACAATACACTATGTGGACTCTCAGTTTGAAGGAGAGGCACGTTTAGTGACTCGACGCAACCTGAGCAATAAAAGTCTCTGAATCAGACATATGATGGACTAAACAATTAGAATCGAAATATTCCTTCTGATGTGGAGACATATCGCGTAACCAGTCGTCGTCGTTATTGACAATTATAATACATGGAACGCCACCCTTTATCCTTCTTTTTTTCCCATATTTAGGGTTCACAGTGAAGTCCCTCTGTGAACCTACTAACTGCTTCCAGTTTGGGCAGAATTTGAAGGGGATGTCGTCAACGATGTTGTAGGTGGCGTTGTCGTCGTATGTTGTGAAGTCGAYCCCGCCGTTGAAGTAGTTATGCCTTCCGAGGCTTCTTGCCCAGGAGGTCTTTCCGGTTCTTGTTGGTCCACAGATGTAGAGGGATCGTCGTCTGTGTTGTAGACGTTCTGGTTCCTGGTATAATCATCCATCCAATTTAGATTTTCAGTAGCTGTGTGGTTATCAATATCAGGATGAATTAGAGTGTAAGCGTCTACGCTTACCACATATAGGTCTGTGTTTAGCCATTGTGTGAGCTCTTCGTGGCACTGAAGATCTACGGGTGAGAAAGGGCTTGTATAGGGAGGTTCAATAGTTGGAAATAATTTTTCGGCACTGTATTCCAACCATTGAAGCTTTGTGGCCCATTCATGAGGGAACTGGTCCCTTATCATCCCAAGATACTCTTCTTTAGAAGTTGCAGTCTGGATGATAATTCGCCATCGTTCATCATTTTTGGATGGAGACACTCTGTGTTTTCTGAAATCTCCTCTGGTGATGACGTTTCCATCCTTAGAGATGTAGTCAAGGACTTGTTGAGAGTCCTTAGCTGGTTGGATATTAGGGTGGTTTCCTTGAAAATCAAAAAAAGAAGGGTCACGTATGTGGCATCTCTTGTCAAGTTGTATAAGACAGTGAAGATGGGGAGTACCATCTTGGTGCAGTTCAGTAGCAATAGCAATGAAGTAAATAAGAAAACGTGACAATTTATCCCAGAGAAAATCTCTGAGATTTTCGGCATTAGAGCTGCTGCGTGGATAAGTAAGGAATACATATTTAGTTTGAAGGCGGAAGGTGTTTTGAGTTTGTTTGGATGTAGAAGGCATATTTTGGCTCATTGTCCGTACTGCAAAACTTTCTATCTTACCTGCGCAGTGAGCCAGTGAGCCAAAGACTCATGAGTCTTAAATAGAATTGCGGGCCGAATGGCCTGCTGACACGTGTGGGGCGAGCGCGCGGAACTTTAATATTACCCGCGCGTTCCGGCCCCACACGCGAGCGCGATAGCGCGAGCGAAAAGGTGCTTTTGTTAAAGTGGCTCGTGAGGATAAGACGCACTATAAAAAGGTGATGTGACATCGAACGAATCAGG

Gene Information

NCBI Accession YP_010087770.1
Location 1-309
Protein Name movement protein
Coding Region ATGTTTCCCTCCAAATACCAAGTATTTCCCTCTGAGTTAAATTACTCTTATACCCCTGTTGAAGCGGGAGACTCTCAATTTCCTGCTAAAACAGGTGATTCTGGGGAGCACGTTTTCTCTAAAGTTGTCGTTGCTCTTATCATAATACTGTTCGCAGTGGGAATCATTTATCTTTCTTATGTTTTATTTTTAAAAGATTTGATTCTACTGCTAAAAGCTAAAAAACAGAGAACGACAACTGAGATAGGGTTTGGTAATACCCCTGCTAGACCGGGTTCTCAACCGCGTCAGGATGCCGGGACCCTTTAA
Protein Sequence MFPSKYQVFPSELNYSYTPVEAGDSQFPAKTGDSGEHVFSKVVVALIIILFAVGIIYLSYVLFLKDLILLLKAKKQRTTTEIGFGNTPARPGSQPRQDAGTL

NCBI Accession YP_010087771.1
Location 293-1063
Protein Name coat protein
Coding Region ATGCCGGGACCCTTTAAAGGAAACGTGTACAGGAGGAGGCGAGGAAGGAATTCTAGGGTTTATGATGCCCTAGGTGTGAATTCCCAACGGGAGCTTGAGAGGCTGGTCAACGCTCCATCAAGGTCTATTCCCAATAGACGAGAGTCGTTGCAGGTGGCTACTTTCACCTGGACTAGTACTGGTGCTGGTGTTAAGTTTTCTGCTGGTGGTGCGGCCTATCTATTAAGTAATTTTCCACAGGGTGCCAACGACAATTGTAGACACACCAACAAGACTATCTTGTACAAGATTATGTGCAAGAACAGTGTGTACTTGGACTCCTCTCATTACCCTAAGGTGTTCAGGTGTCCTTTTACGTTTTGGTTGGTGTACGACAAATCACCTGGTTCAAGTGTTCCCAGTACAGGGGATATTTTTGAAGGTCCAGCTCTGTTTCCTAACAACCCTAAGGTGTGGACAGTTTCAAGGGCAGCTTGCCATCGCTTTGTGGTCAAGAAGACGTGGACAGTCATGATTGAGAGCAACGGTATAGACCCAGCTAAGGCGCAGAGTTCGAGTTATTATGGTCCTGGTCCGTGCAACCAGGTGAAGTTTGTCAACAAATTTTTCAAGAGATTGGGAGTTACAACGGAGTGGAAGAACAGTTCTACTGGTGATGTAGGTGACATAAAAGAAGGGGCTCTGTACATATGTTGTGCCCCTTCTCAGAAATCTGATGTATATGTAAATGGATATTTCCGAGTGTATTTCAAGTCCGTTGGAAATCAATAA
Protein Sequence MPGPFKGNVYRRRRGRNSRVYDALGVNSQRELERLVNAPSRSIPNRRESLQVATFTWTSTGAGVKFSAGGAAYLLSNFPQGANDNCRHTNKTILYKIMCKNSVYLDSSHYPKVFRCPFTFWLVYDKSPGSSVPSTGDIFEGPALFPNNPKVWTVSRAACHRFVVKKTWTVMIESNGIDPAKAQSSSYYGPGPCNQVKFVNKFFKRLGVTTEWKNSSTGDVGDIKEGALYICCAPSQKSDVYVNGYFRVYFKSVGNQ

NCBI Accession YP_010087772.1
Location 1217-1630,1720-2334
Protein Name replication-associated protein
Coding Region ATGAGCCAAAATATGCCTTCTACATCCAAACAAACTCAAAACACCTTCCGCCTTCAAACTAAATATGTATTCCTTACTTATCCACGCAGCAGCTCTAATGCCGAAAATCTCAGAGATTTTCTCTGGGATAAATTGTCACGTTTTCTTATTTACTTCATTGCTATTGCTACTGAACTGCACCAAGATGGTACTCCCCATCTTCACTGTCTTATACAACTTGACAAGAGATGCCACATACGTGACCCTTCTTTTTTTGATTTTCAAGGAAACCACCCTAATATCCAACCAGCTAAGGACTCTCAACAAGTCCTTGACTACATCTCTAAGGATGGAAACGTCATCACCAGAGGAGATTTCAGAAAACACAGAGTGTCTCCATCCAAAAATGATGAACGATGGCGAATTATCATCCAGACTGCAACTTCTAAAGAAGAGTATCTTGGGATGATAAGGGACCAGTTCCCTCATGAATGGGCCACAAAGCTTCAATGGTTGGAATACAGTGCCGAAAAATTATTTCCAACTATTGAACCTCCCTATACAAGCCCTTTCTCACCCGTAGATCTTCAGTGCCACGAAGAGCTCACACAATGGCTAAACACAGACCTATATGTGGAACCAGAACGTCTACAACACAGACGACGATCCCTCTACATCTGTGGACCAACAAGAACCGGAAAGACCTCCTGGGCAAGAAGCCTCGGAAGGCATAACTACTTCAACGGCGGGRTCGACTTCACAACATACGACGACAACGCCACCTACAACATCGTTGACGACATCCCCTTCAAATTCTGCCCAAACTGGAAGCAGTTAGTAGGTTCACAGAGGGACTTCACTGTGAACCCTAAATATGGGAAAAAAAGAAGGATAAAGGGTGGCGTTCCATGTATTATAATTGTCAATAACGACGACGACTGGTTACGCGATATGTCTCCACATCAGAAGGAATATTTCGATTCTAATTGTTTAGTCCATCATATGTCTGATTCAGAGACTTTTATTGCTCAGGTTGCGTCGAGTCACTAA
Protein Sequence MSQNMPSTSKQTQNTFRLQTKYVFLTYPRSSSNAENLRDFLWDKLSRFLIYFIAIATELHQDGTPHLHCLIQLDKRCHIRDPSFFDFQGNHPNIQPAKDSQQVLDYISKDGNVITRGDFRKHRVSPSKNDERWRIIIQTATSKEEYLGMIRDQFPHEWATKLQWLEYSAEKLFPTIEPPYTSPFSPVDLQCHEELTQWLNTDLYVEPERLQHRRRSLYICGPTRTGKTSWARSLGRHNYFNGGXDFTTYDDNATYNIVDDIPFKFCPNWKQLVGSQRDFTVNPKYGKKRRIKGGVPCIIIVNNDDDWLRDMSPHQKEYFDSNCLVHHMSDSETFIAQVASSH

NCBI Accession YP_010087773.1
Location 1429-2334
Protein Name RepA protein
Coding Region ATGAGCCAAAATATGCCTTCTACATCCAAACAAACTCAAAACACCTTCCGCCTTCAAACTAAATATGTATTCCTTACTTATCCACGCAGCAGCTCTAATGCCGAAAATCTCAGAGATTTTCTCTGGGATAAATTGTCACGTTTTCTTATTTACTTCATTGCTATTGCTACTGAACTGCACCAAGATGGTACTCCCCATCTTCACTGTCTTATACAACTTGACAAGAGATGCCACATACGTGACCCTTCTTTTTTTGATTTTCAAGGAAACCACCCTAATATCCAACCAGCTAAGGACTCTCAACAAGTCCTTGACTACATCTCTAAGGATGGAAACGTCATCACCAGAGGAGATTTCAGAAAACACAGAGTGTCTCCATCCAAAAATGATGAACGATGGCGAATTATCATCCAGACTGCAACTTCTAAAGAAGAGTATCTTGGGATGATAAGGGACCAGTTCCCTCATGAATGGGCCACAAAGCTTCAATGGTTGGAATACAGTGCCGAAAAATTATTTCCAACTATTGAACCTCCCTATACAAGCCCTTTCTCACCCGTAGATCTTCAGTGCCACGAAGAGCTCACACAATGGCTAAACACAGACCTATATGTGGTAAGCGTAGACGCTTACACTCTAATTCATCCTGATATTGATAACCACACAGCTACTGAAAATCTAAATTGGATGGATGATTATACCAGGAACCAGAACGTCTACAACACAGACGACGATCCCTCTACATCTGTGGACCAACAAGAACCGGAAAGACCTCCTGGGCAAGAAGCCTCGGAAGGCATAACTACTTCAACGGCGGGRTCGACTTCACAACATACGACGACAACGCCACCTACAACATCGTTGACGACATCCCCTTCAAATTCTGCCCAAACTGGAAGCAGTTAG
Protein Sequence MSQNMPSTSKQTQNTFRLQTKYVFLTYPRSSSNAENLRDFLWDKLSRFLIYFIAIATELHQDGTPHLHCLIQLDKRCHIRDPSFFDFQGNHPNIQPAKDSQQVLDYISKDGNVITRGDFRKHRVSPSKNDERWRIIIQTATSKEEYLGMIRDQFPHEWATKLQWLEYSAEKLFPTIEPPYTSPFSPVDLQCHEELTQWLNTDLYVVSVDAYTLIHPDIDNHTATENLNWMDDYTRNQNVYNTDDDPSTSVDQQEPERPPGQEASEGITTSTAGSTSQHTTTTPPTTSLTTSPSNSAQTGSS

References More References in PubMed

1

Complete Genome Sequence of a New Mastrevirus, Chickpea Redleaf Virus 2, from Australia.

Filardo FF, et al.  Microbiol Resour Announc. 2019 Sep 5;8(36):e00602-19. doi: 10.1128/MRA.00602-19.

PMID: 31488527
2

Two novel mastreviruses from chickpea (Cicer arietinum) in Australia.

Thomas JE, et al.  Arch Virol. 2010 Nov;155(11):1777-88. doi: 10.1007/s00705-010-0763-4. Epub 2010 Aug 24.

PMID: 20734091