Chickpea redleaf virus 2
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_018587145.1 |
| Isolate |
Australia |
| Release date |
2021/6/1 |
| Submitter |
Filardo,F.F., Sharman,M. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ATGTTTCCCTCCAAATACCAAGTATTTCCCTCTGAGTTAAATTACTCTTATACCCCTGTTGAAGCGGGAGACTCTCAATTTCCTGCTAAAACAGGTGATTCTGGGGAGCACGTTTTCTCTAAAGTTGTCGTTGCTCTTATCATAATACTGTTCGCAGTGGGAATCATTTATCTTTCTTATGTTTTATTTTTAAAAGATTTGATTCTACTGCTAAAAGCTAAAAAACAGAGAACGACAACTGAGATAGGGTTTGGTAATACCCCTGCTAGACCGGGTTCTCAACCGCGTCAGGATGCCGGGACCCTTTAAAGGAAACGTGTACAGGAGGAGGCGAGGAAGGAATTCTAGGGTTTATGATGCCCTAGGTGTGAATTCCCAACGGGAGCTTGAGAGGCTGGTCAACGCTCCATCAAGGTCTATTCCCAATAGACGAGAGTCGTTGCAGGTGGCTACTTTCACCTGGACTAGTACTGGTGCTGGTGTTAAGTTTTCTGCTGGTGGTGCGGCCTATCTATTAAGTAATTTTCCACAGGGTGCCAACGACAATTGTAGACACACCAACAAGACTATCTTGTACAAGATTATGTGCAAGAACAGTGTGTACTTGGACTCCTCTCATTACCCTAAGGTGTTCAGGTGTCCTTTTACGTTTTGGTTGGTGTACGACAAATCACCTGGTTCAAGTGTTCCCAGTACAGGGGATATTTTTGAAGGTCCAGCTCTGTTTCCTAACAACCCTAAGGTGTGGACAGTTTCAAGGGCAGCTTGCCATCGCTTTGTGGTCAAGAAGACGTGGACAGTCATGATTGAGAGCAACGGTATAGACCCAGCTAAGGCGCAGAGTTCGAGTTATTATGGTCCTGGTCCGTGCAACCAGGTGAAGTTTGTCAACAAATTTTTCAAGAGATTGGGAGTTACAACGGAGTGGAAGAACAGTTCTACTGGTGATGTAGGTGACATAAAAGAAGGGGCTCTGTACATATGTTGTGCCCCTTCTCAGAAATCTGATGTATATGTAAATGGATATTTCCGAGTGTATTTCAAGTCCGTTGGAAATCAATAAAAAAGATTTTATTATGATATCATATATTGTTTGAATCCTAAGAAAAATTACAACTTATACATTACACAACAAAAATACAACAACCATGAAAAACATAAAACACACCCAAAAACAATACACTATGTGGACTCTCAGTTTGAAGGAGAGGCACGTTTAGTGACTCGACGCAACCTGAGCAATAAAAGTCTCTGAATCAGACATATGATGGACTAAACAATTAGAATCGAAATATTCCTTCTGATGTGGAGACATATCGCGTAACCAGTCGTCGTCGTTATTGACAATTATAATACATGGAACGCCACCCTTTATCCTTCTTTTTTTCCCATATTTAGGGTTCACAGTGAAGTCCCTCTGTGAACCTACTAACTGCTTCCAGTTTGGGCAGAATTTGAAGGGGATGTCGTCAACGATGTTGTAGGTGGCGTTGTCGTCGTATGTTGTGAAGTCGAYCCCGCCGTTGAAGTAGTTATGCCTTCCGAGGCTTCTTGCCCAGGAGGTCTTTCCGGTTCTTGTTGGTCCACAGATGTAGAGGGATCGTCGTCTGTGTTGTAGACGTTCTGGTTCCTGGTATAATCATCCATCCAATTTAGATTTTCAGTAGCTGTGTGGTTATCAATATCAGGATGAATTAGAGTGTAAGCGTCTACGCTTACCACATATAGGTCTGTGTTTAGCCATTGTGTGAGCTCTTCGTGGCACTGAAGATCTACGGGTGAGAAAGGGCTTGTATAGGGAGGTTCAATAGTTGGAAATAATTTTTCGGCACTGTATTCCAACCATTGAAGCTTTGTGGCCCATTCATGAGGGAACTGGTCCCTTATCATCCCAAGATACTCTTCTTTAGAAGTTGCAGTCTGGATGATAATTCGCCATCGTTCATCATTTTTGGATGGAGACACTCTGTGTTTTCTGAAATCTCCTCTGGTGATGACGTTTCCATCCTTAGAGATGTAGTCAAGGACTTGTTGAGAGTCCTTAGCTGGTTGGATATTAGGGTGGTTTCCTTGAAAATCAAAAAAAGAAGGGTCACGTATGTGGCATCTCTTGTCAAGTTGTATAAGACAGTGAAGATGGGGAGTACCATCTTGGTGCAGTTCAGTAGCAATAGCAATGAAGTAAATAAGAAAACGTGACAATTTATCCCAGAGAAAATCTCTGAGATTTTCGGCATTAGAGCTGCTGCGTGGATAAGTAAGGAATACATATTTAGTTTGAAGGCGGAAGGTGTTTTGAGTTTGTTTGGATGTAGAAGGCATATTTTGGCTCATTGTCCGTACTGCAAAACTTTCTATCTTACCTGCGCAGTGAGCCAGTGAGCCAAAGACTCATGAGTCTTAAATAGAATTGCGGGCCGAATGGCCTGCTGACACGTGTGGGGCGAGCGCGCGGAACTTTAATATTACCCGCGCGTTCCGGCCCCACACGCGAGCGCGATAGCGCGAGCGAAAAGGTGCTTTTGTTAAAGTGGCTCGTGAGGATAAGACGCACTATAAAAAGGTGATGTGACATCGAACGAATCAGG
Gene Information
|
NCBI Accession
|
YP_010087770.1
|
|
Location
|
1-309 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGTTTCCCTCCAAATACCAAGTATTTCCCTCTGAGTTAAATTACTCTTATACCCCTGTTGAAGCGGGAGACTCTCAATTTCCTGCTAAAACAGGTGATTCTGGGGAGCACGTTTTCTCTAAAGTTGTCGTTGCTCTTATCATAATACTGTTCGCAGTGGGAATCATTTATCTTTCTTATGTTTTATTTTTAAAAGATTTGATTCTACTGCTAAAAGCTAAAAAACAGAGAACGACAACTGAGATAGGGTTTGGTAATACCCCTGCTAGACCGGGTTCTCAACCGCGTCAGGATGCCGGGACCCTTTAA |
|
Protein Sequence
|
MFPSKYQVFPSELNYSYTPVEAGDSQFPAKTGDSGEHVFSKVVVALIIILFAVGIIYLSYVLFLKDLILLLKAKKQRTTTEIGFGNTPARPGSQPRQDAGTL |
|
NCBI Accession
|
YP_010087771.1
|
|
Location
|
293-1063 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGCCGGGACCCTTTAAAGGAAACGTGTACAGGAGGAGGCGAGGAAGGAATTCTAGGGTTTATGATGCCCTAGGTGTGAATTCCCAACGGGAGCTTGAGAGGCTGGTCAACGCTCCATCAAGGTCTATTCCCAATAGACGAGAGTCGTTGCAGGTGGCTACTTTCACCTGGACTAGTACTGGTGCTGGTGTTAAGTTTTCTGCTGGTGGTGCGGCCTATCTATTAAGTAATTTTCCACAGGGTGCCAACGACAATTGTAGACACACCAACAAGACTATCTTGTACAAGATTATGTGCAAGAACAGTGTGTACTTGGACTCCTCTCATTACCCTAAGGTGTTCAGGTGTCCTTTTACGTTTTGGTTGGTGTACGACAAATCACCTGGTTCAAGTGTTCCCAGTACAGGGGATATTTTTGAAGGTCCAGCTCTGTTTCCTAACAACCCTAAGGTGTGGACAGTTTCAAGGGCAGCTTGCCATCGCTTTGTGGTCAAGAAGACGTGGACAGTCATGATTGAGAGCAACGGTATAGACCCAGCTAAGGCGCAGAGTTCGAGTTATTATGGTCCTGGTCCGTGCAACCAGGTGAAGTTTGTCAACAAATTTTTCAAGAGATTGGGAGTTACAACGGAGTGGAAGAACAGTTCTACTGGTGATGTAGGTGACATAAAAGAAGGGGCTCTGTACATATGTTGTGCCCCTTCTCAGAAATCTGATGTATATGTAAATGGATATTTCCGAGTGTATTTCAAGTCCGTTGGAAATCAATAA |
|
Protein Sequence
|
MPGPFKGNVYRRRRGRNSRVYDALGVNSQRELERLVNAPSRSIPNRRESLQVATFTWTSTGAGVKFSAGGAAYLLSNFPQGANDNCRHTNKTILYKIMCKNSVYLDSSHYPKVFRCPFTFWLVYDKSPGSSVPSTGDIFEGPALFPNNPKVWTVSRAACHRFVVKKTWTVMIESNGIDPAKAQSSSYYGPGPCNQVKFVNKFFKRLGVTTEWKNSSTGDVGDIKEGALYICCAPSQKSDVYVNGYFRVYFKSVGNQ |
|
NCBI Accession
|
YP_010087772.1
|
|
Location
|
1217-1630,1720-2334 |
|
Protein Name
|
replication-associated protein |
|
Coding Region
|
ATGAGCCAAAATATGCCTTCTACATCCAAACAAACTCAAAACACCTTCCGCCTTCAAACTAAATATGTATTCCTTACTTATCCACGCAGCAGCTCTAATGCCGAAAATCTCAGAGATTTTCTCTGGGATAAATTGTCACGTTTTCTTATTTACTTCATTGCTATTGCTACTGAACTGCACCAAGATGGTACTCCCCATCTTCACTGTCTTATACAACTTGACAAGAGATGCCACATACGTGACCCTTCTTTTTTTGATTTTCAAGGAAACCACCCTAATATCCAACCAGCTAAGGACTCTCAACAAGTCCTTGACTACATCTCTAAGGATGGAAACGTCATCACCAGAGGAGATTTCAGAAAACACAGAGTGTCTCCATCCAAAAATGATGAACGATGGCGAATTATCATCCAGACTGCAACTTCTAAAGAAGAGTATCTTGGGATGATAAGGGACCAGTTCCCTCATGAATGGGCCACAAAGCTTCAATGGTTGGAATACAGTGCCGAAAAATTATTTCCAACTATTGAACCTCCCTATACAAGCCCTTTCTCACCCGTAGATCTTCAGTGCCACGAAGAGCTCACACAATGGCTAAACACAGACCTATATGTGGAACCAGAACGTCTACAACACAGACGACGATCCCTCTACATCTGTGGACCAACAAGAACCGGAAAGACCTCCTGGGCAAGAAGCCTCGGAAGGCATAACTACTTCAACGGCGGGRTCGACTTCACAACATACGACGACAACGCCACCTACAACATCGTTGACGACATCCCCTTCAAATTCTGCCCAAACTGGAAGCAGTTAGTAGGTTCACAGAGGGACTTCACTGTGAACCCTAAATATGGGAAAAAAAGAAGGATAAAGGGTGGCGTTCCATGTATTATAATTGTCAATAACGACGACGACTGGTTACGCGATATGTCTCCACATCAGAAGGAATATTTCGATTCTAATTGTTTAGTCCATCATATGTCTGATTCAGAGACTTTTATTGCTCAGGTTGCGTCGAGTCACTAA |
|
Protein Sequence
|
MSQNMPSTSKQTQNTFRLQTKYVFLTYPRSSSNAENLRDFLWDKLSRFLIYFIAIATELHQDGTPHLHCLIQLDKRCHIRDPSFFDFQGNHPNIQPAKDSQQVLDYISKDGNVITRGDFRKHRVSPSKNDERWRIIIQTATSKEEYLGMIRDQFPHEWATKLQWLEYSAEKLFPTIEPPYTSPFSPVDLQCHEELTQWLNTDLYVEPERLQHRRRSLYICGPTRTGKTSWARSLGRHNYFNGGXDFTTYDDNATYNIVDDIPFKFCPNWKQLVGSQRDFTVNPKYGKKRRIKGGVPCIIIVNNDDDWLRDMSPHQKEYFDSNCLVHHMSDSETFIAQVASSH |
|
NCBI Accession
|
YP_010087773.1
|
|
Location
|
1429-2334 |
|
Protein Name
|
RepA protein |
|
Coding Region
|
ATGAGCCAAAATATGCCTTCTACATCCAAACAAACTCAAAACACCTTCCGCCTTCAAACTAAATATGTATTCCTTACTTATCCACGCAGCAGCTCTAATGCCGAAAATCTCAGAGATTTTCTCTGGGATAAATTGTCACGTTTTCTTATTTACTTCATTGCTATTGCTACTGAACTGCACCAAGATGGTACTCCCCATCTTCACTGTCTTATACAACTTGACAAGAGATGCCACATACGTGACCCTTCTTTTTTTGATTTTCAAGGAAACCACCCTAATATCCAACCAGCTAAGGACTCTCAACAAGTCCTTGACTACATCTCTAAGGATGGAAACGTCATCACCAGAGGAGATTTCAGAAAACACAGAGTGTCTCCATCCAAAAATGATGAACGATGGCGAATTATCATCCAGACTGCAACTTCTAAAGAAGAGTATCTTGGGATGATAAGGGACCAGTTCCCTCATGAATGGGCCACAAAGCTTCAATGGTTGGAATACAGTGCCGAAAAATTATTTCCAACTATTGAACCTCCCTATACAAGCCCTTTCTCACCCGTAGATCTTCAGTGCCACGAAGAGCTCACACAATGGCTAAACACAGACCTATATGTGGTAAGCGTAGACGCTTACACTCTAATTCATCCTGATATTGATAACCACACAGCTACTGAAAATCTAAATTGGATGGATGATTATACCAGGAACCAGAACGTCTACAACACAGACGACGATCCCTCTACATCTGTGGACCAACAAGAACCGGAAAGACCTCCTGGGCAAGAAGCCTCGGAAGGCATAACTACTTCAACGGCGGGRTCGACTTCACAACATACGACGACAACGCCACCTACAACATCGTTGACGACATCCCCTTCAAATTCTGCCCAAACTGGAAGCAGTTAG |
|
Protein Sequence
|
MSQNMPSTSKQTQNTFRLQTKYVFLTYPRSSSNAENLRDFLWDKLSRFLIYFIAIATELHQDGTPHLHCLIQLDKRCHIRDPSFFDFQGNHPNIQPAKDSQQVLDYISKDGNVITRGDFRKHRVSPSKNDERWRIIIQTATSKEEYLGMIRDQFPHEWATKLQWLEYSAEKLFPTIEPPYTSPFSPVDLQCHEELTQWLNTDLYVVSVDAYTLIHPDIDNHTATENLNWMDDYTRNQNVYNTDDDPSTSVDQQEPERPPGQEASEGITTSTAGSTSQHTTTTPPTTSLTTSPSNSAQTGSS |