Chickpea redleaf virus


Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000890315.1
Isolate Australia
Release date 2015/2/22
Submitter Thomas,J.E., Parry,J.N., Schwinghamer,M.W., Dann,E.K.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_014739
ACAGCAACGCGCCCGGCCCAATAGCGAGCGCGCGTCAGCGCGCGAGCGTAAGCAGACAAAACCCGACAAAAGTTAGTGGATGAAAAAGTAAAGTTGATGTTGACATAAAGTAAGTGTGAACGCCTTTAAATAGAGACCACTTGTTTTCCCGCCAAAAGCGATGAGAGAGAAAAAGTATCAGATATTTCCTCCGAACCCTAATTACTCTGAATTTTCCCCTCCTGTGGAAATTTCTCACGGTGAAAACTCTCAGGTTAATTTCCAGCGAGTAGTAACTGCTTTAATTGTAGTACTCGTGGCTGTAGGAGTATTGTATTTGGCGTATACCCTCTTTATTAAAGACTGTATTTTACTGTTTAAAGCGAAAAAGCAGCGAACAACGACGGAAATTGGGTTTGGACAAACCCCTGGTAGAAGCAGCGATCGTCCTCCTCAGCCTTAGGGGAAACAGTATGCCAGGGACGTGGGGTGGTAAGAAGAAGCGGAGTGAACGGAAGGTTGTTCCGAACTCCAAGTATGCTTCTGGTCGTATTCCCCGTAATCCCTCTGCTAAGAGGGACGCACTTCAGGTGGCTACCTTTTCCTGGACCAGTTCAGGTTCGGGAGTTAAGTTTAGTGCTGGTGGGGGTGTTTTTCTCATGACCAATTATCCTCAGGGTGCGAACGATAACTGTCGTCACACCAACTCCACTATCACCTACAAGTTGATGACCAAGAATACCGTGTTCTTGGATAGTTCAGTTTGGCCGTTGGTATGTAGGGTTCCGGTGGTGTTCTGGTTGGTGTACGACAAGTTTCCAGGTGCTTCATTACCCAGTACTGGGGATATATTTGATGGTCCTGTCCCATTCAAAAACAATCCTTGGGTCTGGACTGTTTCAAGGGCTGTGTGTCACAGGTTCGTGGTGAAGAAGACCTGGACTGTGATTCTTGAGTCTAATGGAGTTGACCCAACAAAGAAGCAGTCATCCAGTTACTATGGCCCAGGCCCATGTAACCAGTGGCGTGTATCTAATAAATTTTTTAAACGTTTAGGTGTTAGTACTGAGTGGAAGAACTCTTCCACCGGAGACGTAGGTGACATAAAAGAAGGGGCGTTGTACATAGTAGTAGCCCCTTCCCAGAGTTGTGATGTTTATGTTAATGGTTATTTCCGAGTGTATTTTAAGTCCGTTGGAAATCAATAAAATTATTATTCTGTTATGATTTGCATATTATTGAACACGAATTGAAAGAAAATGAATTTATTAATGACAACCGGAAATTACATGAAAAAGATAATAAACAGTAAACACCCACAAACAAATTACACTATACATACCCTCCACGGAGGAGAGGCACGTTCAGTGACTCGACGACACAGGAGCAATAAACGTCTCTCCTTCGTCCATGTAATGGATCATACAGTTGTGTTGAAAGTATTCTTTCTGATGTGAAGACATATCTTTCATCCAATCATCATCATTATTAACTAAGATTATACATGGAACCCCTCCCTTTATTCTTCTTTTTTTGCCGTACTTAGGGTTCACAGTGAAATCCAACTGTGAACCCACTAATTGTTTCCAGTTCGGGCAGAACTTGAATGGGATGTCGTCGATGATGTTGTATGCTGCCTGTTCGTCGTAGGTTGTGAAGTCCACTCCTCCGTTGAAGTAGTTGTGCCTCCCGAGAGACCTTGCCCAGGATGTCTTTCCTGTTCTGGTTGGTCCACATATGTAGAGGGACTTCCTTCTATGTCTGAGTTGTTCGGGTTCCTGGTGTAATGGTCCATCCAAATAAGGTCTTCAGTTGCAGTTTGAGTGTTTAAATTTGGATGTATAAGAGTGTAAGCTTCGACGCTTACCAGGTACAGGTCTCTGTTTAGCCAGTCTTGTATTTCTTCGTGGCATTGAAGGGAGGCCTCTGGGAATGGACTCTGGTATGGAGGCTCTACATCAGGGAATAGCTTATTGGCGCTGTATTCAAACCATTGAAGCTTTGAGGCCCATTCATGTGGGAATTGGTCTCTTATCATTCCCAGATAGTGTTCCTTAGACGTTGCAGTGTTGATGATAGTTCTCCATCGCTCATCATGTTTTGTGGGGGAGACTCTGTGTTTTTTGAACTCCCCCTTGGTGATGATGTTTCCGTCCTTAGATATATAGTCAAGGACTTGTTCAGAATTTCTAGCTGGTTGTATATTAGGGTGGTTTCCCTCAAAATCAAAAAAAGAAGCATCAGATATGTTAGGTTTATTAGTAAGCTGGATAAGACAGTGAAGATGGGGAGAACCATCTTGATGAACTTCAGAAGCAACAGCAATAAAAAAAATAATAAAACGTGTAAGTTTTTCCCAGAGGTAATCTCGTAGAGCCTCTGGGTTTGAGTTGCAATGAGGATAAGTAAGGAAGACATATTTAGATTGAAAACGGAAGTTTGAGGTTTTTTTGTTAAGACGAGGCATGTTATCCCTAATGAATGTTTGCTCTGCACTGTAGACACAAACTCTATACCTTATAACAGCAATGGAGTTGGAGCGAGCAAAATATATAGAGGAGCGCAGCGAACCGAAAACTTACACGTGGCTGCGGTATTGGGCCGGGCTCCGTCGCTAATTAATGTT

Gene Information

NCBI Accession YP_004046661.1
Location 161-442
Protein Name V2
Coding Region ATGAGAGAGAAAAAGTATCAGATATTTCCTCCGAACCCTAATTACTCTGAATTTTCCCCTCCTGTGGAAATTTCTCACGGTGAAAACTCTCAGGTTAATTTCCAGCGAGTAGTAACTGCTTTAATTGTAGTACTCGTGGCTGTAGGAGTATTGTATTTGGCGTATACCCTCTTTATTAAAGACTGTATTTTACTGTTTAAAGCGAAAAAGCAGCGAACAACGACGGAAATTGGGTTTGGACAAACCCCTGGTAGAAGCAGCGATCGTCCTCCTCAGCCTTAG
Protein Sequence MREKKYQIFPPNPNYSEFSPPVEISHGENSQVNFQRVVTALIVVLVAVGVLYLAYTLFIKDCILLFKAKKQRTTTEIGFGQTPGRSSDRPPQP

NCBI Accession YP_004046662.1
Location 453-1187
Protein Name V1
Coding Region ATGCCAGGGACGTGGGGTGGTAAGAAGAAGCGGAGTGAACGGAAGGTTGTTCCGAACTCCAAGTATGCTTCTGGTCGTATTCCCCGTAATCCCTCTGCTAAGAGGGACGCACTTCAGGTGGCTACCTTTTCCTGGACCAGTTCAGGTTCGGGAGTTAAGTTTAGTGCTGGTGGGGGTGTTTTTCTCATGACCAATTATCCTCAGGGTGCGAACGATAACTGTCGTCACACCAACTCCACTATCACCTACAAGTTGATGACCAAGAATACCGTGTTCTTGGATAGTTCAGTTTGGCCGTTGGTATGTAGGGTTCCGGTGGTGTTCTGGTTGGTGTACGACAAGTTTCCAGGTGCTTCATTACCCAGTACTGGGGATATATTTGATGGTCCTGTCCCATTCAAAAACAATCCTTGGGTCTGGACTGTTTCAAGGGCTGTGTGTCACAGGTTCGTGGTGAAGAAGACCTGGACTGTGATTCTTGAGTCTAATGGAGTTGACCCAACAAAGAAGCAGTCATCCAGTTACTATGGCCCAGGCCCATGTAACCAGTGGCGTGTATCTAATAAATTTTTTAAACGTTTAGGTGTTAGTACTGAGTGGAAGAACTCTTCCACCGGAGACGTAGGTGACATAAAAGAAGGGGCGTTGTACATAGTAGTAGCCCCTTCCCAGAGTTGTGATGTTTATGTTAATGGTTATTTCCGAGTGTATTTTAAGTCCGTTGGAAATCAATAA
Protein Sequence MPGTWGGKKKRSERKVVPNSKYASGRIPRNPSAKRDALQVATFSWTSSGSGVKFSAGGGVFLMTNYPQGANDNCRHTNSTITYKLMTKNTVFLDSSVWPLVCRVPVVFWLVYDKFPGASLPSTGDIFDGPVPFKNNPWVWTVSRAVCHRFVVKKTWTVILESNGVDPTKKQSSSYYGPGPCNQWRVSNKFFKRLGVSTEWKNSSTGDVGDIKEGALYIVVAPSQSCDVYVNGYFRVYFKSVGNQ

NCBI Accession YP_004046663.1
Location 1344-1762,1849-2446
Protein Name C1:C2
Coding Region ATGCCTCGTCTTAACAAAAAAACCTCAAACTTCCGTTTTCAATCTAAATATGTCTTCCTTACTTATCCTCATTGCAACTCAAACCCAGAGGCTCTACGAGATTACCTCTGGGAAAAACTTACACGTTTTATTATTTTTTTTATTGCTGTTGCTTCTGAAGTTCATCAAGATGGTTCTCCCCATCTTCACTGTCTTATCCAGCTTACTAATAAACCTAACATATCTGATGCTTCTTTTTTTGATTTTGAGGGAAACCACCCTAATATACAACCAGCTAGAAATTCTGAACAAGTCCTTGACTATATATCTAAGGACGGAAACATCATCACCAAGGGGGAGTTCAAAAAACACAGAGTCTCCCCCACAAAACATGATGAGCGATGGAGAACTATCATCAACACTGCAACGTCTAAGGAACACTATCTGGGAATGATAAGAGACCAATTCCCACATGAATGGGCCTCAAAGCTTCAATGGTTTGAATACAGCGCCAATAAGCTATTCCCTGATGTAGAGCCTCCATACCAGAGTCCATTCCCAGAGGCCTCCCTTCAATGCCACGAAGAAATACAAGACTGGCTAAACAGAGACCTGTACCACCAGGAACCCGAACAACTCAGACATAGAAGGAAGTCCCTCTACATATGTGGACCAACCAGAACAGGAAAGACATCCTGGGCAAGGTCTCTCGGGAGGCACAACTACTTCAACGGAGGAGTGGACTTCACAACCTACGACGAACAGGCAGCATACAACATCATCGACGACATCCCATTCAAGTTCTGCCCGAACTGGAAACAATTAGTGGGTTCACAGTTGGATTTCACTGTGAACCCTAAGTACGGCAAAAAAAGAAGAATAAAGGGAGGGGTTCCATGTATAATCTTAGTTAATAATGATGATGATTGGATGAAAGATATGTCTTCACATCAGAAAGAATACTTTCAACACAACTGTATGATCCATTACATGGACGAAGGAGAGACGTTTATTGCTCCTGTGTCGTCGAGTCACTGA
Protein Sequence MPRLNKKTSNFRFQSKYVFLTYPHCNSNPEALRDYLWEKLTRFIIFFIAVASEVHQDGSPHLHCLIQLTNKPNISDASFFDFEGNHPNIQPARNSEQVLDYISKDGNIITKGEFKKHRVSPTKHDERWRTIINTATSKEHYLGMIRDQFPHEWASKLQWFEYSANKLFPDVEPPYQSPFPEASLQCHEEIQDWLNRDLYHQEPEQLRHRRKSLYICGPTRTGKTSWARSLGRHNYFNGGVDFTTYDEQAAYNIIDDIPFKFCPNWKQLVGSQLDFTVNPKYGKKRRIKGGVPCIILVNNDDDWMKDMSSHQKEYFQHNCMIHYMDEGETFIAPVSSSH

NCBI Accession YP_004046664.1
Location 1556-2446
Protein Name C1
Coding Region ATGCCTCGTCTTAACAAAAAAACCTCAAACTTCCGTTTTCAATCTAAATATGTCTTCCTTACTTATCCTCATTGCAACTCAAACCCAGAGGCTCTACGAGATTACCTCTGGGAAAAACTTACACGTTTTATTATTTTTTTTATTGCTGTTGCTTCTGAAGTTCATCAAGATGGTTCTCCCCATCTTCACTGTCTTATCCAGCTTACTAATAAACCTAACATATCTGATGCTTCTTTTTTTGATTTTGAGGGAAACCACCCTAATATACAACCAGCTAGAAATTCTGAACAAGTCCTTGACTATATATCTAAGGACGGAAACATCATCACCAAGGGGGAGTTCAAAAAACACAGAGTCTCCCCCACAAAACATGATGAGCGATGGAGAACTATCATCAACACTGCAACGTCTAAGGAACACTATCTGGGAATGATAAGAGACCAATTCCCACATGAATGGGCCTCAAAGCTTCAATGGTTTGAATACAGCGCCAATAAGCTATTCCCTGATGTAGAGCCTCCATACCAGAGTCCATTCCCAGAGGCCTCCCTTCAATGCCACGAAGAAATACAAGACTGGCTAAACAGAGACCTGTACCTGGTAAGCGTCGAAGCTTACACTCTTATACATCCAAATTTAAACACTCAAACTGCAACTGAAGACCTTATTTGGATGGACCATTACACCAGGAACCCGAACAACTCAGACATAGAAGGAAGTCCCTCTACATATGTGGACCAACCAGAACAGGAAAGACATCCTGGGCAAGGTCTCTCGGGAGGCACAACTACTTCAACGGAGGAGTGGACTTCACAACCTACGACGAACAGGCAGCATACAACATCATCGACGACATCCCATTCAAGTTCTGCCCGAACTGGAAACAATTAG
Protein Sequence MPRLNKKTSNFRFQSKYVFLTYPHCNSNPEALRDYLWEKLTRFIIFFIAVASEVHQDGSPHLHCLIQLTNKPNISDASFFDFEGNHPNIQPARNSEQVLDYISKDGNIITKGEFKKHRVSPTKHDERWRTIINTATSKEHYLGMIRDQFPHEWASKLQWFEYSANKLFPDVEPPYQSPFPEASLQCHEEIQDWLNRDLYLVSVEAYTLIHPNLNTQTATEDLIWMDHYTRNPNNSDIEGSPSTYVDQPEQERHPGQGLSGGTTTSTEEWTSQPTTNRQHTTSSTTSHSSSARTGNN

References More References in PubMed

1

Identification of New Chickpea Virus and Control of Chickpea Virus Disease.

Cun Z.  Evid Based Complement Alternat Med. 2022 May 28;2022:6465505. doi: 10.1155/2022/6465505. eCollection 2022.

PMID: 35668786

2

Complete Genome Sequence of a New Mastrevirus, Chickpea Redleaf Virus 2, from Australia.

Filardo FF, et al.  Microbiol Resour Announc. 2019 Sep 5;8(36):e00602-19. doi: 10.1128/MRA.00602-19.

PMID: 31488527

3

Two novel mastreviruses from chickpea (Cicer arietinum) in Australia.

Thomas JE, et al.  Arch Virol. 2010 Nov;155(11):1777-88. doi: 10.1007/s00705-010-0763-4. Epub 2010 Aug 24.

PMID: 20734091