Chickpea redleaf virus
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_000890315.1 |
| Isolate |
Australia |
| Release date |
2015/2/22 |
| Submitter |
Thomas,J.E., Parry,J.N., Schwinghamer,M.W., Dann,E.K. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACAGCAACGCGCCCGGCCCAATAGCGAGCGCGCGTCAGCGCGCGAGCGTAAGCAGACAAAACCCGACAAAAGTTAGTGGATGAAAAAGTAAAGTTGATGTTGACATAAAGTAAGTGTGAACGCCTTTAAATAGAGACCACTTGTTTTCCCGCCAAAAGCGATGAGAGAGAAAAAGTATCAGATATTTCCTCCGAACCCTAATTACTCTGAATTTTCCCCTCCTGTGGAAATTTCTCACGGTGAAAACTCTCAGGTTAATTTCCAGCGAGTAGTAACTGCTTTAATTGTAGTACTCGTGGCTGTAGGAGTATTGTATTTGGCGTATACCCTCTTTATTAAAGACTGTATTTTACTGTTTAAAGCGAAAAAGCAGCGAACAACGACGGAAATTGGGTTTGGACAAACCCCTGGTAGAAGCAGCGATCGTCCTCCTCAGCCTTAGGGGAAACAGTATGCCAGGGACGTGGGGTGGTAAGAAGAAGCGGAGTGAACGGAAGGTTGTTCCGAACTCCAAGTATGCTTCTGGTCGTATTCCCCGTAATCCCTCTGCTAAGAGGGACGCACTTCAGGTGGCTACCTTTTCCTGGACCAGTTCAGGTTCGGGAGTTAAGTTTAGTGCTGGTGGGGGTGTTTTTCTCATGACCAATTATCCTCAGGGTGCGAACGATAACTGTCGTCACACCAACTCCACTATCACCTACAAGTTGATGACCAAGAATACCGTGTTCTTGGATAGTTCAGTTTGGCCGTTGGTATGTAGGGTTCCGGTGGTGTTCTGGTTGGTGTACGACAAGTTTCCAGGTGCTTCATTACCCAGTACTGGGGATATATTTGATGGTCCTGTCCCATTCAAAAACAATCCTTGGGTCTGGACTGTTTCAAGGGCTGTGTGTCACAGGTTCGTGGTGAAGAAGACCTGGACTGTGATTCTTGAGTCTAATGGAGTTGACCCAACAAAGAAGCAGTCATCCAGTTACTATGGCCCAGGCCCATGTAACCAGTGGCGTGTATCTAATAAATTTTTTAAACGTTTAGGTGTTAGTACTGAGTGGAAGAACTCTTCCACCGGAGACGTAGGTGACATAAAAGAAGGGGCGTTGTACATAGTAGTAGCCCCTTCCCAGAGTTGTGATGTTTATGTTAATGGTTATTTCCGAGTGTATTTTAAGTCCGTTGGAAATCAATAAAATTATTATTCTGTTATGATTTGCATATTATTGAACACGAATTGAAAGAAAATGAATTTATTAATGACAACCGGAAATTACATGAAAAAGATAATAAACAGTAAACACCCACAAACAAATTACACTATACATACCCTCCACGGAGGAGAGGCACGTTCAGTGACTCGACGACACAGGAGCAATAAACGTCTCTCCTTCGTCCATGTAATGGATCATACAGTTGTGTTGAAAGTATTCTTTCTGATGTGAAGACATATCTTTCATCCAATCATCATCATTATTAACTAAGATTATACATGGAACCCCTCCCTTTATTCTTCTTTTTTTGCCGTACTTAGGGTTCACAGTGAAATCCAACTGTGAACCCACTAATTGTTTCCAGTTCGGGCAGAACTTGAATGGGATGTCGTCGATGATGTTGTATGCTGCCTGTTCGTCGTAGGTTGTGAAGTCCACTCCTCCGTTGAAGTAGTTGTGCCTCCCGAGAGACCTTGCCCAGGATGTCTTTCCTGTTCTGGTTGGTCCACATATGTAGAGGGACTTCCTTCTATGTCTGAGTTGTTCGGGTTCCTGGTGTAATGGTCCATCCAAATAAGGTCTTCAGTTGCAGTTTGAGTGTTTAAATTTGGATGTATAAGAGTGTAAGCTTCGACGCTTACCAGGTACAGGTCTCTGTTTAGCCAGTCTTGTATTTCTTCGTGGCATTGAAGGGAGGCCTCTGGGAATGGACTCTGGTATGGAGGCTCTACATCAGGGAATAGCTTATTGGCGCTGTATTCAAACCATTGAAGCTTTGAGGCCCATTCATGTGGGAATTGGTCTCTTATCATTCCCAGATAGTGTTCCTTAGACGTTGCAGTGTTGATGATAGTTCTCCATCGCTCATCATGTTTTGTGGGGGAGACTCTGTGTTTTTTGAACTCCCCCTTGGTGATGATGTTTCCGTCCTTAGATATATAGTCAAGGACTTGTTCAGAATTTCTAGCTGGTTGTATATTAGGGTGGTTTCCCTCAAAATCAAAAAAAGAAGCATCAGATATGTTAGGTTTATTAGTAAGCTGGATAAGACAGTGAAGATGGGGAGAACCATCTTGATGAACTTCAGAAGCAACAGCAATAAAAAAAATAATAAAACGTGTAAGTTTTTCCCAGAGGTAATCTCGTAGAGCCTCTGGGTTTGAGTTGCAATGAGGATAAGTAAGGAAGACATATTTAGATTGAAAACGGAAGTTTGAGGTTTTTTTGTTAAGACGAGGCATGTTATCCCTAATGAATGTTTGCTCTGCACTGTAGACACAAACTCTATACCTTATAACAGCAATGGAGTTGGAGCGAGCAAAATATATAGAGGAGCGCAGCGAACCGAAAACTTACACGTGGCTGCGGTATTGGGCCGGGCTCCGTCGCTAATTAATGTT
Gene Information
|
NCBI Accession
|
YP_004046661.1
|
|
Location
|
161-442 |
|
Protein Name
|
V2 |
|
Coding Region
|
ATGAGAGAGAAAAAGTATCAGATATTTCCTCCGAACCCTAATTACTCTGAATTTTCCCCTCCTGTGGAAATTTCTCACGGTGAAAACTCTCAGGTTAATTTCCAGCGAGTAGTAACTGCTTTAATTGTAGTACTCGTGGCTGTAGGAGTATTGTATTTGGCGTATACCCTCTTTATTAAAGACTGTATTTTACTGTTTAAAGCGAAAAAGCAGCGAACAACGACGGAAATTGGGTTTGGACAAACCCCTGGTAGAAGCAGCGATCGTCCTCCTCAGCCTTAG |
|
Protein Sequence
|
MREKKYQIFPPNPNYSEFSPPVEISHGENSQVNFQRVVTALIVVLVAVGVLYLAYTLFIKDCILLFKAKKQRTTTEIGFGQTPGRSSDRPPQP |
|
NCBI Accession
|
YP_004046662.1
|
|
Location
|
453-1187 |
|
Protein Name
|
V1 |
|
Coding Region
|
ATGCCAGGGACGTGGGGTGGTAAGAAGAAGCGGAGTGAACGGAAGGTTGTTCCGAACTCCAAGTATGCTTCTGGTCGTATTCCCCGTAATCCCTCTGCTAAGAGGGACGCACTTCAGGTGGCTACCTTTTCCTGGACCAGTTCAGGTTCGGGAGTTAAGTTTAGTGCTGGTGGGGGTGTTTTTCTCATGACCAATTATCCTCAGGGTGCGAACGATAACTGTCGTCACACCAACTCCACTATCACCTACAAGTTGATGACCAAGAATACCGTGTTCTTGGATAGTTCAGTTTGGCCGTTGGTATGTAGGGTTCCGGTGGTGTTCTGGTTGGTGTACGACAAGTTTCCAGGTGCTTCATTACCCAGTACTGGGGATATATTTGATGGTCCTGTCCCATTCAAAAACAATCCTTGGGTCTGGACTGTTTCAAGGGCTGTGTGTCACAGGTTCGTGGTGAAGAAGACCTGGACTGTGATTCTTGAGTCTAATGGAGTTGACCCAACAAAGAAGCAGTCATCCAGTTACTATGGCCCAGGCCCATGTAACCAGTGGCGTGTATCTAATAAATTTTTTAAACGTTTAGGTGTTAGTACTGAGTGGAAGAACTCTTCCACCGGAGACGTAGGTGACATAAAAGAAGGGGCGTTGTACATAGTAGTAGCCCCTTCCCAGAGTTGTGATGTTTATGTTAATGGTTATTTCCGAGTGTATTTTAAGTCCGTTGGAAATCAATAA |
|
Protein Sequence
|
MPGTWGGKKKRSERKVVPNSKYASGRIPRNPSAKRDALQVATFSWTSSGSGVKFSAGGGVFLMTNYPQGANDNCRHTNSTITYKLMTKNTVFLDSSVWPLVCRVPVVFWLVYDKFPGASLPSTGDIFDGPVPFKNNPWVWTVSRAVCHRFVVKKTWTVILESNGVDPTKKQSSSYYGPGPCNQWRVSNKFFKRLGVSTEWKNSSTGDVGDIKEGALYIVVAPSQSCDVYVNGYFRVYFKSVGNQ |
|
NCBI Accession
|
YP_004046663.1
|
|
Location
|
1344-1762,1849-2446 |
|
Protein Name
|
C1:C2 |
|
Coding Region
|
ATGCCTCGTCTTAACAAAAAAACCTCAAACTTCCGTTTTCAATCTAAATATGTCTTCCTTACTTATCCTCATTGCAACTCAAACCCAGAGGCTCTACGAGATTACCTCTGGGAAAAACTTACACGTTTTATTATTTTTTTTATTGCTGTTGCTTCTGAAGTTCATCAAGATGGTTCTCCCCATCTTCACTGTCTTATCCAGCTTACTAATAAACCTAACATATCTGATGCTTCTTTTTTTGATTTTGAGGGAAACCACCCTAATATACAACCAGCTAGAAATTCTGAACAAGTCCTTGACTATATATCTAAGGACGGAAACATCATCACCAAGGGGGAGTTCAAAAAACACAGAGTCTCCCCCACAAAACATGATGAGCGATGGAGAACTATCATCAACACTGCAACGTCTAAGGAACACTATCTGGGAATGATAAGAGACCAATTCCCACATGAATGGGCCTCAAAGCTTCAATGGTTTGAATACAGCGCCAATAAGCTATTCCCTGATGTAGAGCCTCCATACCAGAGTCCATTCCCAGAGGCCTCCCTTCAATGCCACGAAGAAATACAAGACTGGCTAAACAGAGACCTGTACCACCAGGAACCCGAACAACTCAGACATAGAAGGAAGTCCCTCTACATATGTGGACCAACCAGAACAGGAAAGACATCCTGGGCAAGGTCTCTCGGGAGGCACAACTACTTCAACGGAGGAGTGGACTTCACAACCTACGACGAACAGGCAGCATACAACATCATCGACGACATCCCATTCAAGTTCTGCCCGAACTGGAAACAATTAGTGGGTTCACAGTTGGATTTCACTGTGAACCCTAAGTACGGCAAAAAAAGAAGAATAAAGGGAGGGGTTCCATGTATAATCTTAGTTAATAATGATGATGATTGGATGAAAGATATGTCTTCACATCAGAAAGAATACTTTCAACACAACTGTATGATCCATTACATGGACGAAGGAGAGACGTTTATTGCTCCTGTGTCGTCGAGTCACTGA |
|
Protein Sequence
|
MPRLNKKTSNFRFQSKYVFLTYPHCNSNPEALRDYLWEKLTRFIIFFIAVASEVHQDGSPHLHCLIQLTNKPNISDASFFDFEGNHPNIQPARNSEQVLDYISKDGNIITKGEFKKHRVSPTKHDERWRTIINTATSKEHYLGMIRDQFPHEWASKLQWFEYSANKLFPDVEPPYQSPFPEASLQCHEEIQDWLNRDLYHQEPEQLRHRRKSLYICGPTRTGKTSWARSLGRHNYFNGGVDFTTYDEQAAYNIIDDIPFKFCPNWKQLVGSQLDFTVNPKYGKKRRIKGGVPCIILVNNDDDWMKDMSSHQKEYFQHNCMIHYMDEGETFIAPVSSSH |
|
NCBI Accession
|
YP_004046664.1
|
|
Location
|
1556-2446 |
|
Protein Name
|
C1 |
|
Coding Region
|
ATGCCTCGTCTTAACAAAAAAACCTCAAACTTCCGTTTTCAATCTAAATATGTCTTCCTTACTTATCCTCATTGCAACTCAAACCCAGAGGCTCTACGAGATTACCTCTGGGAAAAACTTACACGTTTTATTATTTTTTTTATTGCTGTTGCTTCTGAAGTTCATCAAGATGGTTCTCCCCATCTTCACTGTCTTATCCAGCTTACTAATAAACCTAACATATCTGATGCTTCTTTTTTTGATTTTGAGGGAAACCACCCTAATATACAACCAGCTAGAAATTCTGAACAAGTCCTTGACTATATATCTAAGGACGGAAACATCATCACCAAGGGGGAGTTCAAAAAACACAGAGTCTCCCCCACAAAACATGATGAGCGATGGAGAACTATCATCAACACTGCAACGTCTAAGGAACACTATCTGGGAATGATAAGAGACCAATTCCCACATGAATGGGCCTCAAAGCTTCAATGGTTTGAATACAGCGCCAATAAGCTATTCCCTGATGTAGAGCCTCCATACCAGAGTCCATTCCCAGAGGCCTCCCTTCAATGCCACGAAGAAATACAAGACTGGCTAAACAGAGACCTGTACCTGGTAAGCGTCGAAGCTTACACTCTTATACATCCAAATTTAAACACTCAAACTGCAACTGAAGACCTTATTTGGATGGACCATTACACCAGGAACCCGAACAACTCAGACATAGAAGGAAGTCCCTCTACATATGTGGACCAACCAGAACAGGAAAGACATCCTGGGCAAGGTCTCTCGGGAGGCACAACTACTTCAACGGAGGAGTGGACTTCACAACCTACGACGAACAGGCAGCATACAACATCATCGACGACATCCCATTCAAGTTCTGCCCGAACTGGAAACAATTAG |
|
Protein Sequence
|
MPRLNKKTSNFRFQSKYVFLTYPHCNSNPEALRDYLWEKLTRFIIFFIAVASEVHQDGSPHLHCLIQLTNKPNISDASFFDFEGNHPNIQPARNSEQVLDYISKDGNIITKGEFKKHRVSPTKHDERWRTIINTATSKEHYLGMIRDQFPHEWASKLQWFEYSANKLFPDVEPPYQSPFPEASLQCHEEIQDWLNRDLYLVSVEAYTLIHPNLNTQTATEDLIWMDHYTRNPNNSDIEGSPSTYVDQPEQERHPGQGLSGGTTTSTEEWTSQPTTNRQHTTSSTTSHSSSARTGNN |