Genus | Mastrevirus |
---|---|
NCBI Assembly | GCF_000880315.1 |
Isolate | Pakistan:Layyah |
Release date | 2015/2/22 |
Submitter | Nahid,N., Amin,I., Mansoor,S., Rybicki,E.P., van der Walt,E., Briddon,R.W. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_002014710.1 |
---|---|
Location | 132-410 |
Gene Name | V1 |
Protein Name | movement protein |
Coding Region | ATGGAACGTATTCTGTATCAGGTATTTCCTACGGATACGAATTATTCGTACGATCCTCCTCCTGTGAATACGAATTCCCAGGGATCCTCTCAAACGGATTTCGGGAAGGTGGTTATCGCCTTGGTGGTTATTCTGGTTAGTGTTGGTGTGTTCTATCTGGCTTATAGTCTGTTCTTGAAGGATTGTATCCTTCTGTTCAAGGCGAAGAAGCAGAGGACCACCACTGAAATCGGGTTTGGTCAAACCCCGGCTAGAAACCAGGATCATCCTCAACCTTAG |
Protein Sequence | MERILYQVFPTDTNYSYDPPPVNTNSQGSSQTDFGKVVIALVVILVSVGVFYLAYSLFLKDCILLFKAKKQRTTTEIGFGQTPARNQDHPQP |
NCBI Accession | YP_002014711.1 |
---|---|
Location | 423-1160 |
Gene Name | V2 |
Protein Name | coat protein |
Coding Region | ATGTCAACTGTGACGTGGGGAAACAAGAGGAAGCGCAGCGATAGGTCCTCGAAGGCGAAGAGTAAGTCCTCTGGGTCTTATGTTCCCAGATCTGTGTCTTCCAGGAGGGAATCGTTGCAGGTGGCTACCTTTTCCTGGACCAGTTCTGGTTCGGGTATCAAGTTCTCTACTGGTGGTGCTGCCTACCTTGTGAGTAATTTTCCACAGGGTGCCAACGATAACTGTCGTCACACCAACAAGACCGTGCTATACAAATTCATGGCCAAGAATACGGTGTACTTGGACCCTAGTCATTATCCTAAGGTCTTTAAGTGCCCGTTTACTTTTTGGCTGGTGTACGACAAGGCTCCTGGTGCAAGTGTCCCTAGTACTGGGGACATATTTGAAGGCCCCTCTCTATTCCCTGCTAATCCCTGGACGTGGACTGTGTCTAGGGCTGCTTGCCATCGATTTGTTGTTAAAAAAACGTGGTCAGTGGTGGTGGAGAGCAATGGTGTTGATCCAGGAAAGGCCCAATCCAGTTCCTATTATGGGCCTGGACCTTGTAATCAGATTAAGTCCTGCAATAAGTTCTTTAAGAGGCTGGGTGTGTCAACGGAGTGGAAAAATAGTTCCACGGGGGATGTTGGTGATATAAAGGAAGGAGCCCTTTACATTGTAGGTGCTCCTTCCCAGAAGTCTGATGTATATGTAAATGGTTATTTCCGAGTGTACTTCAAGTCCGTTGGCAATCAATAA |
Protein Sequence | MSTVTWGNKRKRSDRSSKAKSKSSGSYVPRSVSSRRESLQVATFSWTSSGSGIKFSTGGAAYLVSNFPQGANDNCRHTNKTVLYKFMAKNTVYLDPSHYPKVFKCPFTFWLVYDKAPGASVPSTGDIFEGPSLFPANPWTWTVSRAACHRFVVKKTWSVVVESNGVDPGKAQSSSYYGPGPCNQIKSCNKFFKRLGVSTEWKNSSTGDVGDIKEGALYIVGAPSQKSDVYVNGYFRVYFKSVGNQ |
NCBI Accession | YP_002014712.1 |
---|---|
Location | 1318-1731,1818-2408 |
Gene Name | C1:C2 |
Protein Name | Rep A protein |
Coding Region | ATGCCTTCTGCAAACAAGAACTTCAGATTCCAATCAAAATATGTTTTCCTTACCTACCCTAAATGCTCATCTCCAAGAGATGATTTATTCGAGTTTCTCTGGGAGAAACTCACACCTTTTCTTATTTTCTTCCTTGGTGTTGCTACTGAGCTTCATCAAGATGGCACTACCCACTATCATGCTCTTGTCCAGCTTGATAAAAAACCTTGGATTAGGGATCCTTCTTTTTTCGATTTTGAAGGAAATCACCCTAATATCCAACCAGCTAGAAACTCTAAACAAGTCCTTGAATACATTTCCAAGGACGGAGATATTAAAACAAGAGGAGATTTCAGAGATCATAAAGTCTCTCCTCGCAAATCTGACGCACGATGGCGAACTATTATCCAGACTGCAACGTCTAAGGAGGAATATCTTGACATGATCAAGGAGGAGTTCCCCCATGAATGGACTACCAAGCTTCAATGGCTTGAATACTCCGCAAACAAGCTATTCCCTCCACAACCTGAAGCATATGTGTCGCCGTTCACTGAGTCAGATCTCCGCTGCCACGAGGATCTAGCACAATGGAGGGATACACACCTGTACCAAGAACCGAGAAGGACTGGAGCTAGAGTCCCCAGCCTCTACATCTGCGGACCAACTCGTACCGGAAAGACCACCTGGGCTAGAAGCCTCGGACGACACAACTACTGGAATGGGACCATCGACTTCACCACGTACGACGAACACGCGACCTACAATGTCATTGACGACATCCCCTTCAAGTTCGTCCCATTGTGGAAGCAATTAATAGGTTGCCAGTTCGACTTCACTGTCAACCCTAAGTATGGAAAAAAGAAGAAAATAAAAGGTGGTGTCCCTTCCATAATTTTAACAAATAGAGATGAGGACTGGATCCCTGCTATGTCTGAGCATCAGAAAGAATACTTTACAGACAATTGTGAGATCCATTATATGGATGACGGCGAAACTTTTTTTGCCCGGGAATCGTCGAGTCACTGA |
Protein Sequence | MPSANKNFRFQSKYVFLTYPKCSSPRDDLFEFLWEKLTPFLIFFLGVATELHQDGTTHYHALVQLDKKPWIRDPSFFDFEGNHPNIQPARNSKQVLEYISKDGDIKTRGDFRDHKVSPRKSDARWRTIIQTATSKEEYLDMIKEEFPHEWTTKLQWLEYSANKLFPPQPEAYVSPFTESDLRCHEDLAQWRDTHLYQEPRRTGARVPSLYICGPTRTGKTTWARSLGRHNYWNGTIDFTTYDEHATYNVIDDIPFKFVPLWKQLIGCQFDFTVNPKYGKKKKIKGGVPSIILTNRDEDWIPAMSEHQKEYFTDNCEIHYMDDGETFFARESSSH |
NCBI Accession | YP_002014713.1 |
---|---|
Location | 1530-2408 |
Gene Name | C1 |
Protein Name | Rep protein |
Coding Region | ATGCCTTCTGCAAACAAGAACTTCAGATTCCAATCAAAATATGTTTTCCTTACCTACCCTAAATGCTCATCTCCAAGAGATGATTTATTCGAGTTTCTCTGGGAGAAACTCACACCTTTTCTTATTTTCTTCCTTGGTGTTGCTACTGAGCTTCATCAAGATGGCACTACCCACTATCATGCTCTTGTCCAGCTTGATAAAAAACCTTGGATTAGGGATCCTTCTTTTTTCGATTTTGAAGGAAATCACCCTAATATCCAACCAGCTAGAAACTCTAAACAAGTCCTTGAATACATTTCCAAGGACGGAGATATTAAAACAAGAGGAGATTTCAGAGATCATAAAGTCTCTCCTCGCAAATCTGACGCACGATGGCGAACTATTATCCAGACTGCAACGTCTAAGGAGGAATATCTTGACATGATCAAGGAGGAGTTCCCCCATGAATGGACTACCAAGCTTCAATGGCTTGAATACTCCGCAAACAAGCTATTCCCTCCACAACCTGAAGCATATGTGTCGCCGTTCACTGAGTCAGATCTCCGCTGCCACGAGGATCTAGCACAATGGAGGGATACACACCTGTACCAAGTAAGCATCGACGCCTACACTCTTGTCCATCCAGTTTCATATCAGCAAGCTCAATCTGACCTTGAATGGATGGCCGATCTAACCAGGAACCGAGAAGGACTGGAGCTAGAGTCCCCAGCCTCTACATCTGCGGACCAACTCGTACCGGAAAGACCACCTGGGCTAGAAGCCTCGGACGACACAACTACTGGAATGGGACCATCGACTTCACCACGTACGACGAACACGCGACCTACAATGTCATTGACGACATCCCCTTCAAGTTCGTCCCATTGTGGAAGCAATTAA |
Protein Sequence | MPSANKNFRFQSKYVFLTYPKCSSPRDDLFEFLWEKLTPFLIFFLGVATELHQDGTTHYHALVQLDKKPWIRDPSFFDFEGNHPNIQPARNSKQVLEYISKDGDIKTRGDFRDHKVSPRKSDARWRTIIQTATSKEEYLDMIKEEFPHEWTTKLQWLEYSANKLFPPQPEAYVSPFTESDLRCHEDLAQWRDTHLYQVSIDAYTLVHPVSYQQAQSDLEWMADLTRNREGLELESPASTSADQLVPERPPGLEASDDTTTGMGPSTSPRTTNTRPTMSLTTSPSSSSHCGSN |
1 |
Chickpea chlorotic dwarf virus: An Emerging Monopartite Dicot Infecting Mastrevirus. Kanakala S, et al. Viruses. 2018 Dec 21;11(1):5. doi: 10.3390/v11010005. PMID: 30577666 |
---|---|
2 |
Pest categorisation of chickpea chlorotic dwarf virus. EFSA Panel on Plant Health (PLH), et al. EFSA J. 2022 Nov 15;20(11):e07625. doi: 10.2903/j.efsa.2022.7625. eCollection 2022 Nov. PMID: 36398295 |
3 |
Identification of New Chickpea Virus and Control of Chickpea Virus Disease. Cun Z. Evid Based Complement Alternat Med. 2022 May 28;2022:6465505. doi: 10.1155/2022/6465505. eCollection 2022. PMID: 35668786 |
4 |
Rashid K, et al. Cell Mol Biol (Noisy-le-grand). 2019 Sep 30;65(7):34-37. PMID: 31880515 |
5 |
Reddy MG, et al. 3 Biotech. 2021 Mar;11(3):112. doi: 10.1007/s13205-020-02613-7. Epub 2021 Feb 3. PMID: 33598378 |
6 |
First Report of Chickpea Chlorotic Dwarf Virus Infecting Spring Chickpea in Syria. Kumari SG, et al. Plant Dis. 2004 Apr;88(4):424. doi: 10.1094/PDIS.2004.88.4.424C. PMID: 30812628 |
7 |
Invasion of previously unreported dicot plant hosts by chickpea chlorotic dwarf virus in Pakistan. Hameed U, et al. Virusdisease. 2019 Mar;30(1):95-100. doi: 10.1007/s13337-018-0454-4. Epub 2018 May 25. PMID: 31143836 |
8 |
Reddy MG, et al. 3 Biotech. 2022 Jan;12(1):23. doi: 10.1007/s13205-021-03094-y. Epub 2021 Dec 22. PMID: 35036271 |
9 |
First Report of Chickpea chlorotic dwarf virus Infecting Hot Pepper in India. Byun HS, et al. Plant Dis. 2014 Nov;98(11):1590. doi: 10.1094/PDIS-05-14-0440-PDN. PMID: 30699800 |
10 |
Manzoor MT, et al. Arch Virol. 2014 May;159(5):1217-21. doi: 10.1007/s00705-013-1911-4. Epub 2013 Nov 9. PMID: 24212888 |