Chickpea chlorosis Australia virus
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_000911975.1 |
| Isolate |
Australia |
| Release date |
2015/2/22 |
| Submitter |
Hadfield,J., Thomas,J.E., Schwinghamer,M.W., Kraberger,S., Stainton,D., Dayaram,A., Parry,J.N., Pande,D., Martin,D.P., Varsani,A. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ATGTATCCCGCCAAGTACGTGGTGTATCCTTCAGAGAGTAATTACTCTTATACCCCTGTTGGTGGTGATTCCTCTGATACTTCCTCAGGAAGTTCTTCATCTGAAAATATTTTTTCGAAAGTTGTGGTTGCTCTTATAATTATTTTATTTACTGTAGGTATAATTTATTTAGCTTATACTCTTTTTTTAAAAGATTTAATTCTTTTATTGAAGGCCAAGAAGCAGAGAACCACAACTGAGATAGGGTTTGGAAATACCCCTGCACGACCTAATAGTCAGAGGCAACAAGATGTCGGGCCGGTATAAGGGACAGGTATACAGAAGGAAGAAGGGGCAGTATGCAAAGGCGTATTCCGCACTTGGAGTTAATTCAAAACGGGAGTTGGAGCAGTTAGTTAATCAACCTGGGCGTCCTCTTCAATTAAGGCGCCCAGCCCTGCAGGTTGCTGAATACCTGTGGACGTCCAATAAGGCGGGTGTTACGTTTTCTCCTGGTGGTTCAACATTTTTGTTCACTAATTTCCCTCAGGGTGCTAATGAAAACTGCAGGCACACTAACCGCACCATCACTTACAAGATGGCCATAAAGGCATGGGTTGCCTTGGATGGCTCTATGGTTAACAGGGTGTGCAAATTTCCAGTATATTTCTGGTTAGTGTATGACAAGAACCCTGGTGATAGTAATCCTGGGCCCTCAGCCATATTTGATACTCTCTATCAAGATCAGCCTGGTACATGGACTGTTACCCGCAATGTTTGTCACAGGTTCGTTGTTAAAAAACAATGGTCTGTGATGCTGGAAGCTAATGGAGTGGATCCTAGTGTGAAACAAGGATCTACTTACTATGGTCCTGGACCTTGCTATGGTTGGAGGCAGATGAACAAGTTTTTTAAGAGGCTCGGAGTTAGTACTGAGTGGAAGAATTCTTCCACAGGGGATGTTGCTGATATTAAAGAAGGAGCACTTTATCTTGTATGTGCTCCTGCAGGTGGTGCAACCGTTAGGGTTGGGGGTAGATTTCGCATGTATTTCAAATCAGTTGGAAATCAATAAAAAAATTATTTAATATTTTGATGTCATATTATTGAGTAATAGTAGATAGGAAATTACAAATGTTTATTACACAATTATAAAACAACCCCAAATAAAAACTAAATTACACACAAATCAAATTACATTATATATTCTCTGAAGGAGGAGAGGCACGTTGAGTGACTTGACGACGCGCAGCAATAAATGTTTCTCCCTCAGTCATGTAATGAATTAAACAATTGGATTCAAAGTATTCATTCTGAGAGGAAGACATGTCTTTGATCCAATCGTCATCGTTATTTACTAATATAATAGTTGGGATACCTCCCTTAACCCTTTTTTTTTTACCATATTTTGGGTTCACAGTAAAATCTTTCTGTGAACCTACTAATTGCTTCCAATTTGGACAAAATTTAAATGGTATATCATCAATTATGTTGAAGGTGGCGTTGGGGTCATAGGTTGTGAAGTCGATTCCTCCGTTGAAGTAATTGTGTCTTCCGAGGCTTCTTGCCCAGGATGTCTTTCCGGTACGAGTTGGTCCGCAGATGTAGAGGGATCTTCTTCTGTGTTGGAGTTGTTCGGGTTCCTGGTGTATTCATCCATCCAAATTAGATCTTCTGTTGCAGTTTGTATAGATAAATTTGGATGAAGTAAATGGTAAGATTCTACACTTACCACGTAAAGGTCTCTGTTAAGCCACTCAGTAATTTCTTCATCACATTGAAGAAATTCATTTGGAAATGGACTAGAGTAAGGAGGTTCAATATCTGGAAATAGTTTATTTGCACTATATTCTAGCCATTGGAGTTTTGTGGCCCATTCATGTGGAAATTCAGTTTTAATCATTTCCAAATAATCTTCTTTAGTTGTTGCAGTCTGAATAATAGTTCTCCATCTGTCATCAGATTTTGTTGGGGAGACCTTGTGTTTTCTAAAGTCTCCTCTTGTGATGACACTTCCATCCTTGGAGATGTAGTCAAGAACTTGTTCAGAATTTTTAGCTGGTTGGATATTTGGATGGTTTCCTTGAAAATCAAAAAAAGAAGGGTCACGTATATTGCTTCTTTTGTCAAGTTGAAGCAGGCAGTGAAGATGGGGAGTACCATCTTGGTGAAGCTCAGTAGCAACAGCGATAAAGAAAATAGCAAAACGTGAAAGTTTTTCCCAGAGAAAGTCTCTAAGACTTTCGGCATCTGAGCTGCAGCGAGGATAAGTAAGGAAGACATATTTTGTTTGAAGTCTGAATGAAGATGAGGGTTTTTTTGTTTGAGGCATATTTTGGCTCAGAACAGTGTTTTGAAACTCTATCCTTACTAGCGAGTGAGCCAAATGAGCCACTCTGTTTTGTATTAAATAATAGGCAAGGACCAATTCCTTGTTGCCACGTGGGGCGCACTCGCGGAATTTAATGTTACCCGCGAGTGCCTGGCCCCACGCGAGCACGATAGTGCGAGCAAAAAGTTGAAGATAAGATGCTTTTGCTCATGAGCCACTCTTAGTGCTATATAAAGGTGATGTGATCTCTCCACTTTGAAA
Gene Information
|
NCBI Accession
|
YP_008472702.1
|
|
Location
|
1-306 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGTATCCCGCCAAGTACGTGGTGTATCCTTCAGAGAGTAATTACTCTTATACCCCTGTTGGTGGTGATTCCTCTGATACTTCCTCAGGAAGTTCTTCATCTGAAAATATTTTTTCGAAAGTTGTGGTTGCTCTTATAATTATTTTATTTACTGTAGGTATAATTTATTTAGCTTATACTCTTTTTTTAAAAGATTTAATTCTTTTATTGAAGGCCAAGAAGCAGAGAACCACAACTGAGATAGGGTTTGGAAATACCCCTGCACGACCTAATAGTCAGAGGCAACAAGATGTCGGGCCGGTATAA |
|
Protein Sequence
|
MYPAKYVVYPSESNYSYTPVGGDSSDTSSGSSSSENIFSKVVVALIIILFTVGIIYLAYTLFLKDLILLLKAKKQRTTTEIGFGNTPARPNSQRQQDVGPV |
|
NCBI Accession
|
YP_008472703.1
|
|
Location
|
290-1054 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGGGCCGGTATAAGGGACAGGTATACAGAAGGAAGAAGGGGCAGTATGCAAAGGCGTATTCCGCACTTGGAGTTAATTCAAAACGGGAGTTGGAGCAGTTAGTTAATCAACCTGGGCGTCCTCTTCAATTAAGGCGCCCAGCCCTGCAGGTTGCTGAATACCTGTGGACGTCCAATAAGGCGGGTGTTACGTTTTCTCCTGGTGGTTCAACATTTTTGTTCACTAATTTCCCTCAGGGTGCTAATGAAAACTGCAGGCACACTAACCGCACCATCACTTACAAGATGGCCATAAAGGCATGGGTTGCCTTGGATGGCTCTATGGTTAACAGGGTGTGCAAATTTCCAGTATATTTCTGGTTAGTGTATGACAAGAACCCTGGTGATAGTAATCCTGGGCCCTCAGCCATATTTGATACTCTCTATCAAGATCAGCCTGGTACATGGACTGTTACCCGCAATGTTTGTCACAGGTTCGTTGTTAAAAAACAATGGTCTGTGATGCTGGAAGCTAATGGAGTGGATCCTAGTGTGAAACAAGGATCTACTTACTATGGTCCTGGACCTTGCTATGGTTGGAGGCAGATGAACAAGTTTTTTAAGAGGCTCGGAGTTAGTACTGAGTGGAAGAATTCTTCCACAGGGGATGTTGCTGATATTAAAGAAGGAGCACTTTATCTTGTATGTGCTCCTGCAGGTGGTGCAACCGTTAGGGTTGGGGGTAGATTTCGCATGTATTTCAAATCAGTTGGAAATCAATAA |
|
Protein Sequence
|
MSGRYKGQVYRRKKGQYAKAYSALGVNSKRELEQLVNQPGRPLQLRRPALQVAEYLWTSNKAGVTFSPGGSTFLFTNFPQGANENCRHTNRTITYKMAIKAWVALDGSMVNRVCKFPVYFWLVYDKNPGDSNPGPSAIFDTLYQDQPGTWTVTRNVCHRFVVKKQWSVMLEANGVDPSVKQGSTYYGPGPCYGWRQMNKFFKRLGVSTEWKNSSTGDVADIKEGALYLVCAPAGGATVRVGGRFRMYFKSVGNQ |
|
NCBI Accession
|
YP_008472704.1
|
|
Location
|
1179-1622,1712-2311 |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGCCTCAAACAAAAAAACCCTCATCTTCATTCAGACTTCAAACAAAATATGTCTTCCTTACTTATCCTCGCTGCAGCTCAGATGCCGAAAGTCTTAGAGACTTTCTCTGGGAAAAACTTTCACGTTTTGCTATTTTCTTTATCGCTGTTGCTACTGAGCTTCACCAAGATGGTACTCCCCATCTTCACTGCCTGCTTCAACTTGACAAAAGAAGCAATATACGTGACCCTTCTTTTTTTGATTTTCAAGGAAACCATCCAAATATCCAACCAGCTAAAAATTCTGAACAAGTTCTTGACTACATCTCCAAGGATGGAAGTGTCATCACAAGAGGAGACTTTAGAAAACACAAGGTCTCCCCAACAAAATCTGATGACAGATGGAGAACTATTATTCAGACTGCAACAACTAAAGAAGATTATTTGGAAATGATTAAAACTGAATTTCCACATGAATGGGCCACAAAACTCCAATGGCTAGAATATAGTGCAAATAAACTATTTCCAGATATTGAACCTCCTTACTCTAGTCCATTTCCAAATGAATTTCTTCAATGTGATGAAGAAATTACTGAGTGGCTTAACAGAGACCTTTACGTGGAACCCGAACAACTCCAACACAGAAGAAGATCCCTCTACATCTGCGGACCAACTCGTACCGGAAAGACATCCTGGGCAAGAAGCCTCGGAAGACACAATTACTTCAACGGAGGAATCGACTTCACAACCTATGACCCCAACGCCACCTTCAACATAATTGATGATATACCATTTAAATTTTGTCCAAATTGGAAGCAATTAGTAGGTTCACAGAAAGATTTTACTGTGAACCCAAAATATGGTAAAAAAAAAAGGGTTAAGGGAGGTATCCCAACTATTATATTAGTAAATAACGATGACGATTGGATCAAAGACATGTCTTCCTCTCAGAATGAATACTTTGAATCCAATTGTTTAATTCATTACATGACTGAGGGAGAAACATTTATTGCTGCGCGTCGTCAAGTCACTCAACGTGCCTCTCCTCCTTCAGAGAATATATAA |
|
Protein Sequence
|
MPQTKKPSSSFRLQTKYVFLTYPRCSSDAESLRDFLWEKLSRFAIFFIAVATELHQDGTPHLHCLLQLDKRSNIRDPSFFDFQGNHPNIQPAKNSEQVLDYISKDGSVITRGDFRKHKVSPTKSDDRWRTIIQTATTKEDYLEMIKTEFPHEWATKLQWLEYSANKLFPDIEPPYSSPFPNEFLQCDEEITEWLNRDLYVEPEQLQHRRRSLYICGPTRTGKTSWARSLGRHNYFNGGIDFTTYDPNATFNIIDDIPFKFCPNWKQLVGSQKDFTVNPKYGKKKRVKGGIPTIILVNNDDDWIKDMSSSQNEYFESNCLIHYMTEGETFIAARRQVTQRASPPSENI |
|
NCBI Accession
|
YP_008472705.1
|
|
Location
|
1466-2311 |
|
Protein Name
|
RepA protein |
|
Coding Region
|
ATGCCTCAAACAAAAAAACCCTCATCTTCATTCAGACTTCAAACAAAATATGTCTTCCTTACTTATCCTCGCTGCAGCTCAGATGCCGAAAGTCTTAGAGACTTTCTCTGGGAAAAACTTTCACGTTTTGCTATTTTCTTTATCGCTGTTGCTACTGAGCTTCACCAAGATGGTACTCCCCATCTTCACTGCCTGCTTCAACTTGACAAAAGAAGCAATATACGTGACCCTTCTTTTTTTGATTTTCAAGGAAACCATCCAAATATCCAACCAGCTAAAAATTCTGAACAAGTTCTTGACTACATCTCCAAGGATGGAAGTGTCATCACAAGAGGAGACTTTAGAAAACACAAGGTCTCCCCAACAAAATCTGATGACAGATGGAGAACTATTATTCAGACTGCAACAACTAAAGAAGATTATTTGGAAATGATTAAAACTGAATTTCCACATGAATGGGCCACAAAACTCCAATGGCTAGAATATAGTGCAAATAAACTATTTCCAGATATTGAACCTCCTTACTCTAGTCCATTTCCAAATGAATTTCTTCAATGTGATGAAGAAATTACTGAGTGGCTTAACAGAGACCTTTACGTGGTAAGTGTAGAATCTTACCATTTACTTCATCCAAATTTATCTATACAAACTGCAACAGAAGATCTAATTTGGATGGATGAATACACCAGGAACCCGAACAACTCCAACACAGAAGAAGATCCCTCTACATCTGCGGACCAACTCGTACCGGAAAGACATCCTGGGCAAGAAGCCTCGGAAGACACAATTACTTCAACGGAGGAATCGACTTCACAACCTATGACCCCAACGCCACCTTCAACATAA |
|
Protein Sequence
|
MPQTKKPSSSFRLQTKYVFLTYPRCSSDAESLRDFLWEKLSRFAIFFIAVATELHQDGTPHLHCLLQLDKRSNIRDPSFFDFQGNHPNIQPAKNSEQVLDYISKDGSVITRGDFRKHKVSPTKSDDRWRTIIQTATTKEDYLEMIKTEFPHEWATKLQWLEYSANKLFPDIEPPYSSPFPNEFLQCDEEITEWLNRDLYVVSVESYHLLHPNLSIQTATEDLIWMDEYTRNPNNSNTEEDPSTSADQLVPERHPGQEASEDTITSTEESTSQPMTPTPPST |