Apple geminivirus 1

Basic Information

Genus Maldovirus
NCBI Assembly GCF_000969055.1
Isolate China
Release date 2015/4/6
Submitter Liang,P., Li,S.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_026760
ACCGGATGGCCGCGGATTTTGGAGACACCTTTCTCAGCCGTTGGATTTTAATGGCTTTCAAAATTTAAATTTTGAAAGGGGACAGGGGTGGGGACAAAAGGAAAAAGGACAGATTGATGTGACGTTTTTACGCTCTTGTGGGCCCCACATTTGTCTCTTATTAACTACTTTTCTCTGTATACAACTTCCCCTGCAAGTTTCGGAGTCTTTTATTAGCGCCCTTGTAATTTGAATAAATACAATTCAAATTCAAATTAGGGTTTAATGGAAGCCGTGTTCAATCATTTGGTGGGAAAGAAATTGCAGCCCAAGGACGTTTTACCCGCCATTACTGCTTGGATCTGCGAGAAAGGCACAGGTCAACAACTCATTGACTGGGTGAATGGACTCGAGGGGGAGAAAGAGGCCATCTTTCGGGCCCTTAACTCCTGCTCAGCTGAGCAGGAGGGTGAGATGGAGGCAAACGACGATGGCGGGAGCCATGAGGCGTCTCCAGTACGGGAATGTGTACCGGCCGAACCTAATGAAGGCGCGGCGAACAGGATCATCTCTATATCCTGATAAGGGCTATCACGATGACGAGGATAGCCTTGACCCATTTGGAGTTGCTGGGGTCAGGAGGCATATTGATATGCCTGCGCTTGGACAGGGCAAGAATCAGAGGCATACGTCTAAGATTAAGGTTTGGAGCCTCAACATCAAGGGGGTTCTTCATCTTGCACAAGTGTCGACTACGGAGACTGTGGTGGCAGAATTCTTTCTACTATGGAGTTACCGACCGAACGGGGCGGTATTACCTGATTTCAATGAGATCTACACTTCTGGGTCGACGATGACCGAGGTGAGCAACTCTCTGATTGCGAGGATGAAGCATGAGAAGCTAGCTGAGTATAAGCAGCTGGCGAGGAAGAAGATAACCTTGGTGAAGCCCACCAATTCTTCGGCAGGCTCAAATCGAAAGACCTTTACGGTTCAGTTGAAGTTCAGGGGGAGGAACGCCAAGTACTTGACGTTCCAGGAGAATGCGACGTTGGGCAATTGGACGGATCTTAAGTCGGGGGGTTTCTTTTATTTTATTAGGTTTGTAAGCAGCGATGGGAATGCGAGGATGGAAGGACATGTATCTTCTCGAATGATATATTTCCATTAATAAAGAAGCATTTTTACATCAGTTCTTAATTGTTCTACTTCTAACACCCACGCACACTTCTTAACAAAATAATTAATTGCCTCTATTACATAATTAACTGAAATGACTCCTACCATATCTAAATAATTCATTAAATGAAATTCTATTCTACTTCTCAAAGAGGACGCTGCAGATGTCGTCAAGCTCGTCCAGATCCGACAGGTTATCCAGCACTTGTGAAGGTGCAAGGCTTTCCTGAGGTTGTGGTTGAACTTGATTGTGAAGTGGACCTGTTGGTCCTCTGACATATATGCGGGCCGAATGAGGTCGATGCTCACATATATTGGGTTCTTCAGACTCCAGGTATAGACGGCGTAGTTCGCTTGAGATGGTGTAATCGACTCCCCTGTGCGAGAATCCATACTCCTGGCAGTCTGGATTTATGTAGATGATGCAACCGCAGGCGCAGTTAACTCTTCTTCTTCTCTTGGCTGCCTTTGCTTTGGAGTGGATTATCTTCTGTGACCGAGAGGGTTCTTCTGGCATGTCGTACTTCCAATCGTCCACGCACTCTTCTCCTTCTGGACAAGAGCAATTCCTCTTTAAGGGATTAAGGGGAGCTTGTGGTGGGGTCGAAGAGTGGAGCGGAGAGAAAGACAAAGACGGCATTTCCTAAAGCCCAATTTTTCAAATTTGAATTCTTCTCTTCGTCCAACCACTCTTTATAACTGCTTGTAGGCCCAGGATTGCAGAGGAAGATTGTTGGTATGCCCCCTTTAACAAGTAGTGGCTTTCCATACTTCGTATTGCTTTGCCAGTCTCTCTGGGACCCACAGAACTCTTTAAAGTGCTTCAGATAATGCGGATCGACGTCATCAATGACGTTGTATAACGCATCATTGCTAAACACCTTGGGAGAGAGATCAAGATGTCCACATAAGTAATTATGTGGTCCTAAGCTTCTGGCCCACTCAGTTTTTCCAGTTCTTGTTTCTCCCTCAATAAAAATACTCTTCGGTCTTCTTGGCCGCGCAGCGGGATCACTTACAATATTAACACTCACCCAATCATCTAACTCCTCTGGCACATTATTAAAAGAAGAACTAAGATAAATACATCTAAAGGGCTCCGGAGGAGCCATAAATATTTTGGCTGCATTAGCAGACAAATTATGATACTGCGTATAAAAAGTCTTAGGATCCTTCTCCTTAATTATCTGCAGCGAAGCTGATGCGTCAGGAGCATTTAATGCTTCTGCGTAGACTTCAGCTAAATGCTGGCCCTGCCCCCTTGCACTTCTGGCATCGATCTGGAAAACTCCATGGTCAAGAAATTCCCCTCCCTTCTCAATATAGGTCTTGACATCGGACGCGCTCTTAGCTCCCTGTACGTTTGGATGGAAATGTGCTGATCTGGTTGGGGATACCAGGTCGAAGAATCGTTGATTCGTGCATGTGTACTTCCCTTCGAATTGGATAAGCACGTGGAGATGAGGCTCCCCATCTTCGTGTAGCTCTCTGCAAACTCTAACGAATTTCTTATTCGTAGGAGTATTTAGCCCTAGAATTTGTTCTAGGGCTTCTTCTTTGCTAAGAGAGCACCTGGGATAAGTGAGGAAGTAATTCTTGGCTTGGACTTTAAAACGACGTGTGTTGGGCTCTCGTGGCATTTTTGTAATTAAAGGGGTGTCTCCAGATGAGAGCTCCTGGCAACTTATCTATTGAATTGGAGACTGGAGACAATATATAGGGGTTAGAGTTACTTAGGGGTTGGGGGGCACGTGGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009129268.1
Location 265-561
Gene Name V2
Protein Name V2 protein
Coding Region ATGGAAGCCGTGTTCAATCATTTGGTGGGAAAGAAATTGCAGCCCAAGGACGTTTTACCCGCCATTACTGCTTGGATCTGCGAGAAAGGCACAGGTCAACAACTCATTGACTGGGTGAATGGACTCGAGGGGGAGAAAGAGGCCATCTTTCGGGCCCTTAACTCCTGCTCAGCTGAGCAGGAGGGTGAGATGGAGGCAAACGACGATGGCGGGAGCCATGAGGCGTCTCCAGTACGGGAATGTGTACCGGCCGAACCTAATGAAGGCGCGGCGAACAGGATCATCTCTATATCCTGA
Protein Sequence MEAVFNHLVGKKLQPKDVLPAITAWICEKGTGQQLIDWVNGLEGEKEAIFRALNSCSAEQEGEMEANDDGGSHEASPVRECVPAEPNEGAANRIISIS

NCBI Accession YP_009129269.1
Location 383-1150
Gene Name V1
Protein Name V1 protein
Coding Region ATGGACTCGAGGGGGAGAAAGAGGCCATCTTTCGGGCCCTTAACTCCTGCTCAGCTGAGCAGGAGGGTGAGATGGAGGCAAACGACGATGGCGGGAGCCATGAGGCGTCTCCAGTACGGGAATGTGTACCGGCCGAACCTAATGAAGGCGCGGCGAACAGGATCATCTCTATATCCTGATAAGGGCTATCACGATGACGAGGATAGCCTTGACCCATTTGGAGTTGCTGGGGTCAGGAGGCATATTGATATGCCTGCGCTTGGACAGGGCAAGAATCAGAGGCATACGTCTAAGATTAAGGTTTGGAGCCTCAACATCAAGGGGGTTCTTCATCTTGCACAAGTGTCGACTACGGAGACTGTGGTGGCAGAATTCTTTCTACTATGGAGTTACCGACCGAACGGGGCGGTATTACCTGATTTCAATGAGATCTACACTTCTGGGTCGACGATGACCGAGGTGAGCAACTCTCTGATTGCGAGGATGAAGCATGAGAAGCTAGCTGAGTATAAGCAGCTGGCGAGGAAGAAGATAACCTTGGTGAAGCCCACCAATTCTTCGGCAGGCTCAAATCGAAAGACCTTTACGGTTCAGTTGAAGTTCAGGGGGAGGAACGCCAAGTACTTGACGTTCCAGGAGAATGCGACGTTGGGCAATTGGACGGATCTTAAGTCGGGGGGTTTCTTTTATTTTATTAGGTTTGTAAGCAGCGATGGGAATGCGAGGATGGAAGGACATGTATCTTCTCGAATGATATATTTCCATTAA
Protein Sequence MDSRGRKRPSFGPLTPAQLSRRVRWRQTTMAGAMRRLQYGNVYRPNLMKARRTGSSLYPDKGYHDDEDSLDPFGVAGVRRHIDMPALGQGKNQRHTSKIKVWSLNIKGVLHLAQVSTTETVVAEFFLLWSYRPNGAVLPDFNEIYTSGSTMTEVSNSLIARMKHEKLAEYKQLARKKITLVKPTNSSAGSNRKTFTVQLKFRGRNAKYLTFQENATLGNWTDLKSGGFFYFIRFVSSDGNARMEGHVSSRMIYFH

NCBI Accession YP_009129270.1
Location 1147-1551
Gene Name C3
Protein Name C3 protein
Coding Region ATGGATTCTCGCACAGGGGAGTCGATTACACCATCTCAAGCGAACTACGCCGTCTATACCTGGAGTCTGAAGAACCCAATATATGTGAGCATCGACCTCATTCGGCCCGCATATATGTCAGAGGACCAACAGGTCCACTTCACAATCAAGTTCAACCACAACCTCAGGAAAGCCTTGCACCTTCACAAGTGCTGGATAACCTGTCGGATCTGGACGAGCTTGACGACATCTGCAGCGTCCTCTTTGAGAAGTAGAATAGAATTTCATTTAATGAATTATTTAGATATGGTAGGAGTCATTTCAGTTAATTATGTAATAGAGGCAATTAATTATTTTGTTAAGAAGTGTGCGTGGGTGTTAGAAGTAGAACAATTAAGAACTGATGTAAAAATGCTTCTTTATTAA
Protein Sequence MDSRTGESITPSQANYAVYTWSLKNPIYVSIDLIRPAYMSEDQQVHFTIKFNHNLRKALHLHKCWITCRIWTSLTTSAASSLRSRIEFHLMNYLDMVGVISVNYVIEAINYFVKKCAWVLEVEQLRTDVKMLLY

NCBI Accession YP_009129271.1
Location 1298-1798
Gene Name C2
Protein Name C2 protein
Coding Region ATGCCGTCTTTGTCTTTCTCTCCGCTCCACTCTTCGACCCCACCACAAGCTCCCCTTAATCCCTTAAAGAGGAATTGCTCTTGTCCAGAAGGAGAAGAGTGCGTGGACGATTGGAAGTACGACATGCCAGAAGAACCCTCTCGGTCACAGAAGATAATCCACTCCAAAGCAAAGGCAGCCAAGAGAAGAAGAAGAGTTAACTGCGCCTGCGGTTGCATCATCTACATAAATCCAGACTGCCAGGAGTATGGATTCTCGCACAGGGGAGTCGATTACACCATCTCAAGCGAACTACGCCGTCTATACCTGGAGTCTGAAGAACCCAATATATGTGAGCATCGACCTCATTCGGCCCGCATATATGTCAGAGGACCAACAGGTCCACTTCACAATCAAGTTCAACCACAACCTCAGGAAAGCCTTGCACCTTCACAAGTGCTGGATAACCTGTCGGATCTGGACGAGCTTGACGACATCTGCAGCGTCCTCTTTGAGAAGTAG
Protein Sequence MPSLSFSPLHSSTPPQAPLNPLKRNCSCPEGEECVDDWKYDMPEEPSRSQKIIHSKAKAAKRRRRVNCACGCIIYINPDCQEYGFSHRGVDYTISSELRRLYLESEEPNICEHRPHSARIYVRGPTGPLHNQVQPQPQESLAPSQVLDNLSDLDELDDICSVLFEK

NCBI Accession YP_009129272.1
Location 1740-2798
Gene Name C1
Protein Name C1 protein
Coding Region ATGCCACGAGAGCCCAACACACGTCGTTTTAAAGTCCAAGCCAAGAATTACTTCCTCACTTATCCCAGGTGCTCTCTTAGCAAAGAAGAAGCCCTAGAACAAATTCTAGGGCTAAATACTCCTACGAATAAGAAATTCGTTAGAGTTTGCAGAGAGCTACACGAAGATGGGGAGCCTCATCTCCACGTGCTTATCCAATTCGAAGGGAAGTACACATGCACGAATCAACGATTCTTCGACCTGGTATCCCCAACCAGATCAGCACATTTCCATCCAAACGTACAGGGAGCTAAGAGCGCGTCCGATGTCAAGACCTATATTGAGAAGGGAGGGGAATTTCTTGACCATGGAGTTTTCCAGATCGATGCCAGAAGTGCAAGGGGGCAGGGCCAGCATTTAGCTGAAGTCTACGCAGAAGCATTAAATGCTCCTGACGCATCAGCTTCGCTGCAGATAATTAAGGAGAAGGATCCTAAGACTTTTTATACGCAGTATCATAATTTGTCTGCTAATGCAGCCAAAATATTTATGGCTCCTCCGGAGCCCTTTAGATGTATTTATCTTAGTTCTTCTTTTAATAATGTGCCAGAGGAGTTAGATGATTGGGTGAGTGTTAATATTGTAAGTGATCCCGCTGCGCGGCCAAGAAGACCGAAGAGTATTTTTATTGAGGGAGAAACAAGAACTGGAAAAACTGAGTGGGCCAGAAGCTTAGGACCACATAATTACTTATGTGGACATCTTGATCTCTCTCCCAAGGTGTTTAGCAATGATGCGTTATACAACGTCATTGATGACGTCGATCCGCATTATCTGAAGCACTTTAAAGAGTTCTGTGGGTCCCAGAGAGACTGGCAAAGCAATACGAAGTATGGAAAGCCACTACTTGTTAAAGGGGGCATACCAACAATCTTCCTCTGCAATCCTGGGCCTACAAGCAGTTATAAAGAGTGGTTGGACGAAGAGAAGAATTCAAATTTGAAAAATTGGGCTTTAGGAAATGCCGTCTTTGTCTTTCTCTCCGCTCCACTCTTCGACCCCACCACAAGCTCCCCTTAA
Protein Sequence MPREPNTRRFKVQAKNYFLTYPRCSLSKEEALEQILGLNTPTNKKFVRVCRELHEDGEPHLHVLIQFEGKYTCTNQRFFDLVSPTRSAHFHPNVQGAKSASDVKTYIEKGGEFLDHGVFQIDARSARGQGQHLAEVYAEALNAPDASASLQIIKEKDPKTFYTQYHNLSANAAKIFMAPPEPFRCIYLSSSFNNVPEELDDWVSVNIVSDPAARPRRPKSIFIEGETRTGKTEWARSLGPHNYLCGHLDLSPKVFSNDALYNVIDDVDPHYLKHFKEFCGSQRDWQSNTKYGKPLLVKGGIPTIFLCNPGPTSSYKEWLDEEKNSNLKNWALGNAVFVFLSAPLFDPTTSSP

NCBI Accession YP_009129273.1
Location 2399-2632
Gene Name C4
Protein Name C4 protein
Coding Region ATGGGGAGCCTCATCTCCACGTGCTTATCCAATTCGAAGGGAAGTACACATGCACGAATCAACGATTCTTCGACCTGGTATCCCCAACCAGATCAGCACATTTCCATCCAAACGTACAGGGAGCTAAGAGCGCGTCCGATGTCAAGACCTATATTGAGAAGGGAGGGGAATTTCTTGACCATGGAGTTTTCCAGATCGATGCCAGAAGTGCAAGGGGGCAGGGCCAGCATTTAG
Protein Sequence MGSLISTCLSNSKGSTHARINDSSTWYPQPDQHISIQTYRELRARPMSRPILRREGNFLTMEFSRSMPEVQGGRASI

References More References in PubMed

1

Molecular Characterization of Three Apple Geminivirus Isolates in Crabapples Detected in Inner Mongolia, China.

Sun PP, et al.  Plants (Basel). 2023 Jan 3;12(1):195. doi: 10.3390/plants12010195.

PMID: 36616324
2

Genome editing in cells of apple cultivar 'Fuji' using geminivirus-derived replicons for transient expression of CRISPR/Cas9 components.

Negishi K, et al.  Plant Biotechnol (Tokyo). 2024 Dec 25;41(4):425-436. doi: 10.5511/plantbiotechnology.24.0903a.

PMID: 40083569
3

An asymptomatic geminivirus activates autophagy and enhances plant defenses against diverse pathogens.

Wang L, et al.  Stress Biol. 2024 Oct 8;4(1):42. doi: 10.1007/s44154-024-00176-8.

PMID: 39377848
4

Pest categorisation of non-EU viruses and viroids of Prunus L.

EFSA Panel on Plant Health (PLH), et al.  EFSA J. 2019 Sep 30;17(9):e05735. doi: 10.2903/j.efsa.2019.5735. eCollection 2019 Sep.

PMID: 32626421
5

A New Begomovirus Causes Tomato Leaf Curl Disease in Baja California Sur, Mexico.

Holguín-Peña RJ, et al.  Plant Dis. 2005 Mar;89(3):341. doi: 10.1094/PD-89-0341A.

PMID: 30795368