Wild Vitis latent virus
Basic Information
| Genus |
Grablovirus
|
| NCBI Assembly |
GCF_002270745.1 |
| Isolate |
USA |
| Release date |
2017/8/26 |
| Submitter |
Perry,K.L., McLane,H., Thompson,J.R., Fuchs,M. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGCCCCGCGTGTTGGCCCATTGGTTCGAATCCACGTGTCGGCTTATTATTGGTGTGCTTCTTTCTTAGCGTGTACGCTAAGTTTCGTATATATTCTTTACTTTTGCTTTGCGGCTGTGTATATAAATGATTTTACTTTATTAGCCAGAATGGAATTTTGTACCGTGGTCTCTATCCTTAGAGATATATTGCTGACAATTGGTTTGTTCTTTATTATATATTGGTTAGTGTTCGTTCTTTCTCCTCGCATAAGAAAAGAACCTGTTGCTCGTATATCTGAAAATGTCTCAAACTCTATCAAACGCTCAAATAGCGCAGAATTCGGGAATAGATGACTCAGTCACTATTCCGAAAATACGATTCGATCCGTATGATGAATCGTATTCTGAAACATCTTCTTATTCTTCTTGCTGTGATAGTTCCCGTGGTTCTAGTCAGAGTTCTGGTGGTGGTTTGCTCAAGCATCATAATAGTGATAGAGTATCTAATTCGGTTTTTAACGAATTAGATGATTATAACCCAACTTTGTTGGATTTATCTTTGCCTGCTGCATTATGGTTTATGTGTGAAAGATATTTATCTAGCGTTGTAAAAGGCGATTTATTGGTTTTACCAGGTATATCATCTGCCCAGTGCCCAGCTGTTCGCCGACTTCTTAGGCGAGTATCTAGACGGAATTGTTCTTTTCATTCGAAGTGCGAGGAGTGGGCTTACGGTTGTTTGGAATTAAAGGCTTGCAAAGATGGTATTGAGAGCTCGGAGGAGAGTTCGGAGAAGTCGCCGGTACCCGCGAAGGAGGGTTCTTTCGAAGCGTTCGCGCGTGGCGCGGCGTGCTCGACCTCGTAGTCGACCCTGTCAGTTTTCATTCCATGGAAACAGTTTTGCTGCCCAGCCTACTCTGTTCTTTTTAACTCCTATTGCTCTCGGCAATGGTGCCGAAGATAGGACTGGTCCGGTATTGACTGTGAGTAGTATGTATCTTAAAGGTGTTGTGATTCCGACGGATACGGTTACGGATGGTTTGCATGACGTTTACTTCTGGATAATATTGGACCGCTTTCCTCAGGGGAGCGATCCTTCATATGGTGATATATTTACTGGCAGTGATGCCAGTGGCTCAATGGTTGAAACGTTGACGAGGAACAAGCAGAACCGTAAGAGATTCAGGATCCTTGGATCTAAGAAGTTGGTGGTTGGAGTTAATCGGAAACCACAAGAGTCGCTTCCACATAGCCGTGCTCCGTTCTCTATATTCCAAAGGCGTAGACTTGTAGTTTCATTCAAAAATGATGTAACTGGTGGCGGGCGTAATGATGTTGAACGGAATAGGCTGTATCTTGCTTGTGCTTCTAGCACTGGTCATACCTTTAGGTTGTATTGTAACGGCATTATAAATTTCTTTAATGGAAGTGTTTTTTAATCGACCTCGCTGTTTAATATGGCGTTGTGACATATCAACTTCTTATGTGGATGGTGATATTGTAATTGAGGGGGAACATGACGTTCCCATTATGTCCGAAGATGAAGAAATGGTTAATGGTGAAGTGCATCCGCTGACAGAATTGTTGCGGAAACGGAGAAGGGAACGTGACCCAAACGAGATCGAGATCACGTTCCCAAAACGACGACGTGTGTACGGTGCTGATGCTGGAATGACAGATGTTGACAAGTTGAAGAACTATATTTATGAAGATGATTATGTAAAACACAAAAGACGTCTGGATCTAGAACTCGGTTCTGGACTTCACAGACCAGACAGTCGTTGTAATATAATGTAATGTAATATACAAGTTTGATATTATAAAGTGGTGCTGGAATACATACAAATAAAAAAAAAAAACAAAAAAACCTAAAACTCAAAAACCCATCTAAATAATGTACCCCCCTGATTTACTTTATTAAAACCCGAGGTAGGTCGAAGCCGGAGGCTGAGACCGTTGGCGAGGCTGAGCCCGGAAGCTCAGAACAGGGGTTCTGATATGGTAACAAAAACTATGTTTTGTTCTGCCCACGGTCTGAAAGACACGTGCCAGTTGTTGATTGCTTCGTAATAAGATTGGTCTGGATTGCAGAGAATAATTGACGGTATTCCACCTTTGATAGTCTTTTTCTTCCTGTATTTCTCGTTGCTTATGAAATTGCGTTGTGATCCCAATAAAGCTTTTTTACATGGTAAATACTGGAATGGAATGTCGTCTATGACATTATACATTGCATCATTATTATACTCCGAGAAATCTACATTTTCACACCAATAATTATGTGGGCCTAACGATCTGGCCCACATTGTTTTCCCTGTTCTTGATGGTCCTTCAATCACAATGCTCCTCCTGCGGTCCTTCTCCACCTGCAACGTCAAGTTCATTGTCAGACCGATACTGGTTTTCAACGAATGTTGCAATAGCATCATCTATTTTGTCATCAATGATTTGATGAACGGTCTCTGATTCTATTTCCAAGAAGCGACAATTTGCTAGGCATCTGTGTTCTCTGGCTGTATCTTTACGTACCATGTAGAGTTCTGTCTTGATCCAATGATCAACTTCTGGTGGCATGTGATTGAAAGTGTTGAATTGGCTGGCATGGACGGAAGGGGTTGGAGGCCATGTTTTATCAGCAGCATATTCAAGTCGTTGTAGATGGATGGCGTACTGGTAGGGATAATTGTTTCTAACGAGTTCAAGGAACTCGTGTTTGCTGGTGGCGGAACGTAAGTATTCTCCGAAATCAGCCTCTCGATTTCGGTGTCCTGATCCAGTTCTGTTGGGTTTTGTGCCGGATTCTGTTGTATCTCCATCCTTTCCGACGTAGTTGTAGACGTCTTCAACGTCTCTGGGTTTGGTGATGTTGGGGTGATAGGAATTAGACGATACGGTGATGTCAAAGTGTTTTGAATTACGAATCGTCTGGCGCCTGAAGAAGATGAGCAAGGCGTGTAGGTGTGGCTCGCCATCTAAATGTCGTTCTTTGCCTATTCTGATATACTCTAGCCTGTCTGAGAATTTGGATTTGAAAAAATCCAAAGCGAACTCTTTTATAACTGGACACTGAGGGTATGTTAGGAAAAACGACTTTGAACGGAGATTGAATGATGTCATGATGACGTCAGCTATTTTGTCGTATTACCCCCTAACCTTCCTTATATAAGGGTGGTACATGGTCCAACAGGCTTATTTGGTGGTTCAGAAGAAGGATTTTGGACCACTTTGAACCACTATCGCAACATTACTATTTATAGAGGAGGAAATGAATGCTGACGCGGGGCCGAATAATATT
Gene Information
|
NCBI Accession
|
YP_009408623.1
|
|
Location
|
285-848 |
|
Protein Name
|
V2 |
|
Coding Region
|
ATGTCTCAAACTCTATCAAACGCTCAAATAGCGCAGAATTCGGGAATAGATGACTCAGTCACTATTCCGAAAATACGATTCGATCCGTATGATGAATCGTATTCTGAAACATCTTCTTATTCTTCTTGCTGTGATAGTTCCCGTGGTTCTAGTCAGAGTTCTGGTGGTGGTTTGCTCAAGCATCATAATAGTGATAGAGTATCTAATTCGGTTTTTAACGAATTAGATGATTATAACCCAACTTTGTTGGATTTATCTTTGCCTGCTGCATTATGGTTTATGTGTGAAAGATATTTATCTAGCGTTGTAAAAGGCGATTTATTGGTTTTACCAGGTATATCATCTGCCCAGTGCCCAGCTGTTCGCCGACTTCTTAGGCGAGTATCTAGACGGAATTGTTCTTTTCATTCGAAGTGCGAGGAGTGGGCTTACGGTTGTTTGGAATTAAAGGCTTGCAAAGATGGTATTGAGAGCTCGGAGGAGAGTTCGGAGAAGTCGCCGGTACCCGCGAAGGAGGGTTCTTTCGAAGCGTTCGCGCGTGGCGCGGCGTGCTCGACCTCGTAG |
|
Protein Sequence
|
MSQTLSNAQIAQNSGIDDSVTIPKIRFDPYDESYSETSSYSSCCDSSRGSSQSSGGGLLKHHNSDRVSNSVFNELDDYNPTLLDLSLPAALWFMCERYLSSVVKGDLLVLPGISSAQCPAVRRLLRRVSRRNCSFHSKCEEWAYGCLELKACKDGIESSEESSEKSPVPAKEGSFEAFARGAACSTS |
|
NCBI Accession
|
YP_009408624.1
|
|
Location
|
745-1422 |
|
Protein Name
|
V1 |
|
Coding Region
|
ATGGTATTGAGAGCTCGGAGGAGAGTTCGGAGAAGTCGCCGGTACCCGCGAAGGAGGGTTCTTTCGAAGCGTTCGCGCGTGGCGCGGCGTGCTCGACCTCGTAGTCGACCCTGTCAGTTTTCATTCCATGGAAACAGTTTTGCTGCCCAGCCTACTCTGTTCTTTTTAACTCCTATTGCTCTCGGCAATGGTGCCGAAGATAGGACTGGTCCGGTATTGACTGTGAGTAGTATGTATCTTAAAGGTGTTGTGATTCCGACGGATACGGTTACGGATGGTTTGCATGACGTTTACTTCTGGATAATATTGGACCGCTTTCCTCAGGGGAGCGATCCTTCATATGGTGATATATTTACTGGCAGTGATGCCAGTGGCTCAATGGTTGAAACGTTGACGAGGAACAAGCAGAACCGTAAGAGATTCAGGATCCTTGGATCTAAGAAGTTGGTGGTTGGAGTTAATCGGAAACCACAAGAGTCGCTTCCACATAGCCGTGCTCCGTTCTCTATATTCCAAAGGCGTAGACTTGTAGTTTCATTCAAAAATGATGTAACTGGTGGCGGGCGTAATGATGTTGAACGGAATAGGCTGTATCTTGCTTGTGCTTCTAGCACTGGTCATACCTTTAGGTTGTATTGTAACGGCATTATAAATTTCTTTAATGGAAGTGTTTTTTAA |
|
Protein Sequence
|
MVLRARRRVRRSRRYPRRRVLSKRSRVARRARPRSRPCQFSFHGNSFAAQPTLFFLTPIALGNGAEDRTGPVLTVSSMYLKGVVIPTDTVTDGLHDVYFWIILDRFPQGSDPSYGDIFTGSDASGSMVETLTRNKQNRKRFRILGSKKLVVGVNRKPQESLPHSRAPFSIFQRRRLVVSFKNDVTGGGRNDVERNRLYLACASSTGHTFRLYCNGIINFFNGSVF |
|
NCBI Accession
|
YP_009408625.1
|
|
Location
|
1406-1780 |
|
Protein Name
|
V3 |
|
Coding Region
|
ATGGAAGTGTTTTTTAATCGACCTCGCTGTTTAATATGGCGTTGTGACATATCAACTTCTTATGTGGATGGTGATATTGTAATTGAGGGGGAACATGACGTTCCCATTATGTCCGAAGATGAAGAAATGGTTAATGGTGAAGTGCATCCGCTGACAGAATTGTTGCGGAAACGGAGAAGGGAACGTGACCCAAACGAGATCGAGATCACGTTCCCAAAACGACGACGTGTGTACGGTGCTGATGCTGGAATGACAGATGTTGACAAGTTGAAGAACTATATTTATGAAGATGATTATGTAAAACACAAAAGACGTCTGGATCTAGAACTCGGTTCTGGACTTCACAGACCAGACAGTCGTTGTAATATAATGTAA |
|
Protein Sequence
|
MEVFFNRPRCLIWRCDISTSYVDGDIVIEGEHDVPIMSEDEEMVNGEVHPLTELLRKRRRERDPNEIEITFPKRRRVYGADAGMTDVDKLKNYIYEDDYVKHKRRLDLELGSGLHRPDSRCNIM |
|
NCBI Accession
|
YP_009408626.1
|
|
Location
|
1963-2412 |
|
Protein Name
|
C2 |
|
Coding Region
|
ATGATGCTATTGCAACATTCGTTGAAAACCAGTATCGGTCTGACAATGAACTTGACGTTGCAGGTGGAGAAGGACCGCAGGAGGAGCATTGTGATTGAAGGACCATCAAGAACAGGGAAAACAATGTGGGCCAGATCGTTAGGCCCACATAATTATTGGTGTGAAAATGTAGATTTCTCGGAGTATAATAATGATGCAATGTATAATGTCATAGACGACATTCCATTCCAGTATTTACCATGTAAAAAAGCTTTATTGGGATCACAACGCAATTTCATAAGCAACGAGAAATACAGGAAGAAAAAGACTATCAAAGGTGGAATACCGTCAATTATTCTCTGCAATCCAGACCAATCTTATTACGAAGCAATCAACAACTGGCACGTGTCTTTCAGACCGTGGGCAGAACAAAACATAGTTTTTGTTACCATATCAGAACCCCTGTTCTGA |
|
Protein Sequence
|
MMLLQHSLKTSIGLTMNLTLQVEKDRRRSIVIEGPSRTGKTMWARSLGPHNYWCENVDFSEYNNDAMYNVIDDIPFQYLPCKKALLGSQRNFISNEKYRKKKTIKGGIPSIILCNPDQSYYEAINNWHVSFRPWAEQNIVFVTISEPLF |
|
NCBI Accession
|
YP_009408627.1
|
|
Location
|
2315-3100 |
|
Protein Name
|
C1 |
|
Coding Region
|
ATGACATCATTCAATCTCCGTTCAAAGTCGTTTTTCCTAACATACCCTCAGTGTCCAGTTATAAAAGAGTTCGCTTTGGATTTTTTCAAATCCAAATTCTCAGACAGGCTAGAGTATATCAGAATAGGCAAAGAACGACATTTAGATGGCGAGCCACACCTACACGCCTTGCTCATCTTCTTCAGGCGCCAGACGATTCGTAATTCAAAACACTTTGACATCACCGTATCGTCTAATTCCTATCACCCCAACATCACCAAACCCAGAGACGTTGAAGACGTCTACAACTACGTCGGAAAGGATGGAGATACAACAGAATCCGGCACAAAACCCAACAGAACTGGATCAGGACACCGAAATCGAGAGGCTGATTTCGGAGAATACTTACGTTCCGCCACCAGCAAACACGAGTTCCTTGAACTCGTTAGAAACAATTATCCCTACCAGTACGCCATCCATCTACAACGACTTGAATATGCTGCTGATAAAACATGGCCTCCAACCCCTTCCGTCCATGCCAGCCAATTCAACACTTTCAATCACATGCCACCAGAAGTTGATCATTGGATCAAGACAGAACTCTACATGGTACGTAAAGATACAGCCAGAGAACACAGATGCCTAGCAAATTGTCGCTTCTTGGAAATAGAATCAGAGACCGTTCATCAAATCATTGATGACAAAATAGATGATGCTATTGCAACATTCGTTGAAAACCAGTATCGGTCTGACAATGAACTTGACGTTGCAGGTGGAGAAGGACCGCAGGAGGAGCATTGTGATTGA |
|
Protein Sequence
|
MTSFNLRSKSFFLTYPQCPVIKEFALDFFKSKFSDRLEYIRIGKERHLDGEPHLHALLIFFRRQTIRNSKHFDITVSSNSYHPNITKPRDVEDVYNYVGKDGDTTESGTKPNRTGSGHRNREADFGEYLRSATSKHEFLELVRNNYPYQYAIHLQRLEYAADKTWPPTPSVHASQFNTFNHMPPEVDHWIKTELYMVRKDTAREHRCLANCRFLEIESETVHQIIDDKIDDAIATFVENQYRSDNELDVAGGEGPQEEHCD |
|
NCBI Accession
|
YP_009408628.1
|
|
Location
|
2476-2955 |
|
Protein Name
|
C3 |
|
Coding Region
|
ATGGCGAGCCACACCTACACGCCTTGCTCATCTTCTTCAGGCGCCAGACGATTCGTAATTCAAAACACTTTGACATCACCGTATCGTCTAATTCCTATCACCCCAACATCACCAAACCCAGAGACGTTGAAGACGTCTACAACTACGTCGGAAAGGATGGAGATACAACAGAATCCGGCACAAAACCCAACAGAACTGGATCAGGACACCGAAATCGAGAGGCTGATTTCGGAGAATACTTACGTTCCGCCACCAGCAAACACGAGTTCCTTGAACTCGTTAGAAACAATTATCCCTACCAGTACGCCATCCATCTACAACGACTTGAATATGCTGCTGATAAAACATGGCCTCCAACCCCTTCCGTCCATGCCAGCCAATTCAACACTTTCAATCACATGCCACCAGAAGTTGATCATTGGATCAAGACAGAACTCTACATGGTACGTAAAGATACAGCCAGAGAACACAGATGCCTAG |
|
Protein Sequence
|
MASHTYTPCSSSSGARRFVIQNTLTSPYRLIPITPTSPNPETLKTSTTTSERMEIQQNPAQNPTELDQDTEIERLISENTYVPPPANTSSLNSLETIIPTSTPSIYNDLNMLLIKHGLQPLPSMPANSTLSITCHQKLIIGSRQNSTWYVKIQPENTDA |