Prunus latent virus
Basic Information
| Genus |
Grablovirus
|
| NCBI Assembly |
GCF_004788535.1 |
| Isolate |
USA |
| Release date |
2019/6/28 |
| Submitter |
Al Rwahnih,M., Alabi,O., Westrick,N., Golino,D. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGCCCCTCAACTGGTACATGGTATACTTCTCGAATAAGTTATGTTCGCGTTCCCATCAAGAATACCATTTCACTTTATTCCGTGGTTGGATATATTCCTTTTTTGTGGTAGTGTTTTGTTCGATATTCTTTTCTTAGCTTGTATGGAGTTCTGCGATTGGACAGAGGTACTTACAGTTATTCTTTTGACTGGTGCGGCCTTTTGTTTCTTGTACTGGTTAGTATTTCTTTCTCCTCGCGAGTGTAGGGATAAGGATGCCAAGCCAAAGCTATCCAGTTCCAAAGATGCGACGCAGACGTCTGGACCTTCCTCAGACGTCTACGGGCAGCATCAGTTCTAGCGATAGCGGTAGTGATGTCAATATTGATGTTATACGTGATGCTTCGTTTGATGGTGGTTTGTCTGGGAATGATTCTCGCAGGAGACATGTAGTCTCCGTTGCGAATGATTTGTTAGCTGATGATCCTGATGCAACGATTCTTGATTTGTCGTTGCCCTCTGTTCTCTGGTTTTGTACTCAAAGGTATTTGTCTTGTTGTGTAAGGAAGGAATTTGTCCCTTTGCCAGGTATTTCGGATACGCAATTGATCGCTGTTAGGCGTTTGATTAGACGAGTTTCTCGTCGTCACTGCTTGTTTACCTACAAGTGCGAGGAGTGGTTTGAAGGTTGTTACAGGATAAAGCAATATGGTATTGAAGAGGCGACCGAGTCGTCGATATCGCAGGGCCACGAAGAAACGGAGTGGGAGAAGTTCACAAAGGAAGCGGCGTGCACGGCCACGTAGTAGGCCCTGTCAGTTTTCGTTCCATGGAAATGCGTTTGGTGGTACACCAACGCTTTTCTTTTTGACACCCATTGCTCTTGGCAATGGTGCTGAAGACAGAACTGGCTCAGTGCTTACTGTCAGTAGTATGTATTTGAAGGGTGTTGTGGTTCCGACGGACAATGTCACTGACGGTCTTCATGATATTTATTTTTGGATTATATTGGACAGGTTTCCTACTGGCACAGATCCTGCTGTTTCTGATATATTTACTGGCAGTGATACTGGAGGTAGCATGATTGAGACATTGACTAGGAATCGTTTGAATCGTAAGAGGTTTCGTATTCTGGGCTCGAAGAAACTTGTGATTGGAGTTAACAGAAAGCCACAAGAGTCTTTGCCTCATACTCGTGCTGCGTTTAATATCTTCCAAAGACGGCGGTTAGTTGTTGCATTTAAGAATGATGTTTCTGGTGGTGGTAGGAATGATGTTGAGCGTAATCGCATATATATGGCGTGTGCTTCTGCTACCGGACATTCTTTCCGGCTATATCTTAATGGGATTGTTAATTTCTATAATGGTGTTATTTTTTCATAGACCACGCTGTTTGATATGGCGTGTGTATGATCAAGTTTCTGAGGTTGGTTTATACGATGGTTATGATGATGTTGTTAAAGATATACCCATTGATGGGGATGATGATGAGTCGTATATGGTTTCCGATGAGTATGCTGAATTCCTTGAGACGTTGAAGAGACGTCGTTCTGAGCGTGGAGGGATGACTTCCAACTTGAAGCGAAGAAGAGTGATGGTTGATCCTGATGAAGATCTTGTTAATCGTTTGAAGGAGTATTTGGGTGAAGATGAGTATGATAGACATCGTAGACGACTGGACTTAGAACTTGGTTCTGGTCAACATAGACCAGACAGTCGTTGTGTTGTAATGTGAATGTAATAAATTGTGTGATATTTTATGCTGGTGGTGGATGTTATAAAATTAAAAAAAATTTAACAAACCATGACACTCTATGACGAACGTACGGACAAACAGTAACCCGGAATGGTATTAGTTTATGAATGAAAAAGGCGGCGCAGCCGCCGTTAAAATCAGTACAAGCTTGAATTTATTTTGACAAAGATGATATTATCCTCTGCCCAAGGCTTAAAACTGGCATGCCAATTTGTAATTGCGTCTTCATATGATTGGTCGGGGTTACACAGCACTATTGCTGGTATACCCCCTTTGATTGTTTGTTTCTTCCGGTATTTCTCATTCGCTATGTAGTTATGTTGGCAGCCTAATAGCGCTTTCTTGCACGGAAGATATTGAAATGGTATATCGTCTATTACATTATATAATGCTTTGTCATCGTACATGCTGAAGTCAACTGTTTCTGCCCAGTAGTTGTGTGGTCCTAATGATCTTGCCCATTGAGTTTTCCCTGTTCTTGATGGGCCTTCAATCACTAGTGACTTCTTCCGCTGGTTCGTCTCCTGCCACATCCGTTACGTTATCAGACTCGTACAGCCTTTCCATGTACTCTATGTAGTGTGTGTCTACCATGTCATCTATTATAGCTTTGACATTGTATGTTTCATGATGCATGATATTTTGTTGTGCTACTGAGAAGACATCTCTGGCTGTATCTTTACGTACCATGAAGAGTTCTGTGTTGACCCACTGGAGAACTTCTGGTGGAAGGTTATTCCAAGTTGACCATTTTCTGACATGGGGGGAAGGCATTGGAGGCCATGCTTGGTTAGCAAAGTATTCAAGTCGTTGTAGATTGAGGATGTACTGGTATGGGTAGTTGGTTTTGACGAGGTTGAAGAATTCTTCTCTGGTGTTGGAGATTTTGAGGTATTCTCCAAAATCCACCTCTCTAGATCTTTCTCGAGTGTGGAGTCTTGGCTTTTCTCCGAACTCGATGTGGTCTCCATCCTTGGAGACGTATTCGTGAACGTCTTTGACGTTTCTTGGTTTTGTGATGTTTGGGTGATAGGAATGAGACGATACGGTGATGTCAAAGTGTTTTGGATTACGAATGCACTGCCTTTTCCTGAAGATGAGCAAGGCGTGTAGGTGTGGCTCTCCATCTTGGTGTTTTTCTTGGCTGACGAGGGCGTATTCAAGTGTTTTGGTGAACTTTGATTTGAAGAAATCAAGGGCAAATTGTTTGATGACTGGGCACTGAGGATAGGTTAGGAAGAAGTTTTTTGATCTGAGATTGAAGGATGTTGATGCCATCTTGGTTGTATTTTAGATGGTAATGGTATTTGTTTATATAGTGGTTGATGTGTTCACTGTTTTTGTCTTATTATCCCCCAATTCTCCTTATATATTGCTGGTACGTGGTATTTTAGTTGTTTTGAGTGGTATTTTAGCTTGAGGGGCCGTTTAATATT
Gene Information
|
NCBI Accession
|
YP_009666818.1
|
|
Location
|
258-788 |
|
Protein Name
|
V2 Protein |
|
Coding Region
|
ATGCCAAGCCAAAGCTATCCAGTTCCAAAGATGCGACGCAGACGTCTGGACCTTCCTCAGACGTCTACGGGCAGCATCAGTTCTAGCGATAGCGGTAGTGATGTCAATATTGATGTTATACGTGATGCTTCGTTTGATGGTGGTTTGTCTGGGAATGATTCTCGCAGGAGACATGTAGTCTCCGTTGCGAATGATTTGTTAGCTGATGATCCTGATGCAACGATTCTTGATTTGTCGTTGCCCTCTGTTCTCTGGTTTTGTACTCAAAGGTATTTGTCTTGTTGTGTAAGGAAGGAATTTGTCCCTTTGCCAGGTATTTCGGATACGCAATTGATCGCTGTTAGGCGTTTGATTAGACGAGTTTCTCGTCGTCACTGCTTGTTTACCTACAAGTGCGAGGAGTGGTTTGAAGGTTGTTACAGGATAAAGCAATATGGTATTGAAGAGGCGACCGAGTCGTCGATATCGCAGGGCCACGAAGAAACGGAGTGGGAGAAGTTCACAAAGGAAGCGGCGTGCACGGCCACGTAG |
|
Protein Sequence
|
MPSQSYPVPKMRRRRLDLPQTSTGSISSSDSGSDVNIDVIRDASFDGGLSGNDSRRRHVVSVANDLLADDPDATILDLSLPSVLWFCTQRYLSCCVRKEFVPLPGISDTQLIAVRRLIRRVSRRHCLFTYKCEEWFEGCYRIKQYGIEEATESSISQGHEETEWEKFTKEAACTAT |
|
NCBI Accession
|
YP_009666819.1
|
|
Location
|
691-1365 |
|
Protein Name
|
CP/V1 Protein |
|
Coding Region
|
ATGGTATTGAAGAGGCGACCGAGTCGTCGATATCGCAGGGCCACGAAGAAACGGAGTGGGAGAAGTTCACAAAGGAAGCGGCGTGCACGGCCACGTAGTAGGCCCTGTCAGTTTTCGTTCCATGGAAATGCGTTTGGTGGTACACCAACGCTTTTCTTTTTGACACCCATTGCTCTTGGCAATGGTGCTGAAGACAGAACTGGCTCAGTGCTTACTGTCAGTAGTATGTATTTGAAGGGTGTTGTGGTTCCGACGGACAATGTCACTGACGGTCTTCATGATATTTATTTTTGGATTATATTGGACAGGTTTCCTACTGGCACAGATCCTGCTGTTTCTGATATATTTACTGGCAGTGATACTGGAGGTAGCATGATTGAGACATTGACTAGGAATCGTTTGAATCGTAAGAGGTTTCGTATTCTGGGCTCGAAGAAACTTGTGATTGGAGTTAACAGAAAGCCACAAGAGTCTTTGCCTCATACTCGTGCTGCGTTTAATATCTTCCAAAGACGGCGGTTAGTTGTTGCATTTAAGAATGATGTTTCTGGTGGTGGTAGGAATGATGTTGAGCGTAATCGCATATATATGGCGTGTGCTTCTGCTACCGGACATTCTTTCCGGCTATATCTTAATGGGATTGTTAATTTCTATAATGGTGTTATTTTTTCATAG |
|
Protein Sequence
|
MVLKRRPSRRYRRATKKRSGRSSQRKRRARPRSRPCQFSFHGNAFGGTPTLFFLTPIALGNGAEDRTGSVLTVSSMYLKGVVVPTDNVTDGLHDIYFWIILDRFPTGTDPAVSDIFTGSDTGGSMIETLTRNRLNRKRFRILGSKKLVIGVNRKPQESLPHTRAAFNIFQRRRLVVAFKNDVSGGGRNDVERNRIYMACASATGHSFRLYLNGIVNFYNGVIFS |
|
NCBI Accession
|
YP_009666820.1
|
|
Location
|
1229-1717 |
|
Protein Name
|
V3 Protein |
|
Coding Region
|
ATGATGTTTCTGGTGGTGGTAGGAATGATGTTGAGCGTAATCGCATATATATGGCGTGTGCTTCTGCTACCGGACATTCTTTCCGGCTATATCTTAATGGGATTGTTAATTTCTATAATGGTGTTATTTTTTCATAGACCACGCTGTTTGATATGGCGTGTGTATGATCAAGTTTCTGAGGTTGGTTTATACGATGGTTATGATGATGTTGTTAAAGATATACCCATTGATGGGGATGATGATGAGTCGTATATGGTTTCCGATGAGTATGCTGAATTCCTTGAGACGTTGAAGAGACGTCGTTCTGAGCGTGGAGGGATGACTTCCAACTTGAAGCGAAGAAGAGTGATGGTTGATCCTGATGAAGATCTTGTTAATCGTTTGAAGGAGTATTTGGGTGAAGATGAGTATGATAGACATCGTAGACGACTGGACTTAGAACTTGGTTCTGGTCAACATAGACCAGACAGTCGTTGTGTTGTAATGTGA |
|
Protein Sequence
|
MMFLVVVGMMLSVIAYIWRVLLLPDILSGYILMGLLISIMVLFFHRPRCLIWRVYDQVSEVGLYDGYDDVVKDIPIDGDDDESYMVSDEYAEFLETLKRRRSERGGMTSNLKRRRVMVDPDEDLVNRLKEYLGEDEYDRHRRRLDLELGSGQHRPDSRCVVM |
|
NCBI Accession
|
YP_009666821.1
|
|
Location
|
1876-2271 |
|
Protein Name
|
RepB/C2 Protein |
|
Coding Region
|
ATGTGGCAGGAGACGAACCAGCGGAAGAAGTCACTAGTGATTGAAGGCCCATCAAGAACAGGGAAAACTCAATGGGCAAGATCATTAGGACCACACAACTACTGGGCAGAAACAGTTGACTTCAGCATGTACGATGACAAAGCATTATATAATGTAATAGACGATATACCATTTCAATATCTTCCGTGCAAGAAAGCGCTATTAGGCTGCCAACATAACTACATAGCGAATGAGAAATACCGGAAGAAACAAACAATCAAAGGGGGTATACCAGCAATAGTGCTGTGTAACCCCGACCAATCATATGAAGACGCAATTACAAATTGGCATGCCAGTTTTAAGCCTTGGGCAGAGGATAATATCATCTTTGTCAAAATAAATTCAAGCTTGTACTGA |
|
Protein Sequence
|
MWQETNQRKKSLVIEGPSRTGKTQWARSLGPHNYWAETVDFSMYDDKALYNVIDDIPFQYLPCKKALLGCQHNYIANEKYRKKQTIKGGIPAIVLCNPDQSYEDAITNWHASFKPWAEDNIIFVKINSSLY |
|
NCBI Accession
|
YP_009666822.1
|
|
Location
|
2228-3016 |
|
Protein Name
|
RepA/C1 Protein |
|
Coding Region
|
ATGGCATCAACATCCTTCAATCTCAGATCAAAAAACTTCTTCCTAACCTATCCTCAGTGCCCAGTCATCAAACAATTTGCCCTTGATTTCTTCAAATCAAAGTTCACCAAAACACTTGAATACGCCCTCGTCAGCCAAGAAAAACACCAAGATGGAGAGCCACACCTACACGCCTTGCTCATCTTCAGGAAAAGGCAGTGCATTCGTAATCCAAAACACTTTGACATCACCGTATCGTCTCATTCCTATCACCCAAACATCACAAAACCAAGAAACGTCAAAGACGTTCACGAATACGTCTCCAAGGATGGAGACCACATCGAGTTCGGAGAAAAGCCAAGACTCCACACTCGAGAAAGATCTAGAGAGGTGGATTTTGGAGAATACCTCAAAATCTCCAACACCAGAGAAGAATTCTTCAACCTCGTCAAAACCAACTACCCATACCAGTACATCCTCAATCTACAACGACTTGAATACTTTGCTAACCAAGCATGGCCTCCAATGCCTTCCCCCCATGTCAGAAAATGGTCAACTTGGAATAACCTTCCACCAGAAGTTCTCCAGTGGGTCAACACAGAACTCTTCATGGTACGTAAAGATACAGCCAGAGATGTCTTCTCAGTAGCACAACAAAATATCATGCATCATGAAACATACAATGTCAAAGCTATAATAGATGACATGGTAGACACACACTACATAGAGTACATGGAAAGGCTGTACGAGTCTGATAACGTAACGGATGTGGCAGGAGACGAACCAGCGGAAGAAGTCACTAGTGATTGA |
|
Protein Sequence
|
MASTSFNLRSKNFFLTYPQCPVIKQFALDFFKSKFTKTLEYALVSQEKHQDGEPHLHALLIFRKRQCIRNPKHFDITVSSHSYHPNITKPRNVKDVHEYVSKDGDHIEFGEKPRLHTRERSREVDFGEYLKISNTREEFFNLVKTNYPYQYILNLQRLEYFANQAWPPMPSPHVRKWSTWNNLPPEVLQWVNTELFMVRKDTARDVFSVAQQNIMHHETYNVKAIIDDMVDTHYIEYMERLYESDNVTDVAGDEPAEEVTSD |
|
NCBI Accession
|
YP_009666823.1
|
|
Location
|
2389-2865 |
|
Protein Name
|
C3 Protein |
|
Coding Region
|
ATGGAGAGCCACACCTACACGCCTTGCTCATCTTCAGGAAAAGGCAGTGCATTCGTAATCCAAAACACTTTGACATCACCGTATCGTCTCATTCCTATCACCCAAACATCACAAAACCAAGAAACGTCAAAGACGTTCACGAATACGTCTCCAAGGATGGAGACCACATCGAGTTCGGAGAAAAGCCAAGACTCCACACTCGAGAAAGATCTAGAGAGGTGGATTTTGGAGAATACCTCAAAATCTCCAACACCAGAGAAGAATTCTTCAACCTCGTCAAAACCAACTACCCATACCAGTACATCCTCAATCTACAACGACTTGAATACTTTGCTAACCAAGCATGGCCTCCAATGCCTTCCCCCCATGTCAGAAAATGGTCAACTTGGAATAACCTTCCACCAGAAGTTCTCCAGTGGGTCAACACAGAACTCTTCATGGTACGTAAAGATACAGCCAGAGATGTCTTCTCAGTAG |
|
Protein Sequence
|
MESHTYTPCSSSGKGSAFVIQNTLTSPYRLIPITQTSQNQETSKTFTNTSPRMETTSSSEKSQDSTLEKDLERWILENTSKSPTPEKNSSTSSKPTTHTSTSSIYNDLNTLLTKHGLQCLPPMSENGQLGITFHQKFSSGSTQNSSWYVKIQPEMSSQ |