Genus | Grablovirus |
---|---|
NCBI Assembly | GCF_000909815.1 |
Isolate | USA |
Release date | 2015/2/22 |
Submitter | Al Rwahnih,M., Dave,A., Anderson,M.M., Rowhani,A., Uyemoto,J.K., Sudarshana,M.R., Sudarshana,M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_008400113.1 |
---|---|
Location | 292-807 |
Protein Name | V2 protein |
Coding Region | ATGGTAACACTGAACAAACGGAATCGCGTTCTTCCTGAGTGCGATTCCTGCAGTTCTAGTGAAAGTTCTTTGAATGATATTGATATTTGTGGTGATGATGATGGGTTAGGGGATGAGGCTTTAGACGCTGGATCCGTTTATTCGTCGTCACAGAAACTGTTAGTTTCTGTGGCTAAAGATGTTCTTTTAGATGACTGTGATTCAACGATATTGGATATATCGTTGCCTTCTGCTTTATGGTTTTTGTCGCAAAGATATTTGACTTGTTGTTTGAGGAAAGAATTACTGCCTCTGCCAGGTATATCCGAGAAACAGACTGTTTTATTGCGACAGCTGATTAGGCGTGTCGCTCGTCGTCATTGTTTATTTACTTACAAGTGCGAGGAGTGGTTTGAGGGTTGTTTGAAGATAAAGAAGGATGGTAATGAAAAAAAGGAGCCGCCAACGGAAGCAGAGAAGAAGGCGCAGGACGACTGGGAGGAGTTCTGCCGTAAGGCGGCGTGCTCGGCCTCGTAG |
Protein Sequence | MVTLNKRNRVLPECDSCSSSESSLNDIDICGDDDGLGDEALDAGSVYSSSQKLLVSVAKDVLLDDCDSTILDISLPSALWFLSQRYLTCCLRKELLPLPGISEKQTVLLRQLIRRVARRHCLFTYKCEEWFEGCLKIKKDGNEKKEPPTEAEKKAQDDWEEFCRKAACSAS |
NCBI Accession | YP_008400114.1 |
---|---|
Location | 710-1384 |
Protein Name | V1 protein |
Coding Region | ATGGTAATGAAAAAAAGGAGCCGCCAACGGAAGCAGAGAAGAAGGCGCAGGACGACTGGGAGGAGTTCTGCCGTAAGGCGGCGTGCTCGGCCTCGTAGTAGGCCTTGTCAGTTTGCATTCCATGGGAATTCTTTTGGGGGTACCCCTTCCCTTTTTTTTTTGACTCCGATTGCTTTAGGTACTGGTGCGGAAGACAGAACAGGTCCAGTATTGACTGTCAGCAGTATGTATTTGAAAGGTGTTGTGCTTCCGTCGGATAATGTCACCGATGGATTGCATGATATTTATTTTTGGATAATTTTGGATCGGTTTCCTACTGGAACTGATCCTTCGGTATCTGATATATTCACTGGTAGTGATAACAGCGGAAGCATGATTGAGACATTAACGAGGAATCGTTTGAATCGTAAGAGATTTCGTATTTTGGGTTCGAAGAAACTTGTTGTTGGCGTGAATAAGAAGCCGCAGGAGTCATTGCCACATTCACGTGCAGCATTTAATATTTTTCAAAGACGTCGTCTGGTTGTCGCTTTTAAAAACGACGTGTCTGGTGGAGGACGTAATGATGTTGAAAGGAATCGTATTTATTTGTCTGCGGCTTCTGCAAGTGGACATACGTTTAGATTGTATCTAAATGGAATTGTAAACTTTTATAATGGAGTTATTTTTCAATAG |
Protein Sequence | MVMKKRSRQRKQRRRRRTTGRSSAVRRRARPRSRPCQFAFHGNSFGGTPSLFFLTPIALGTGAEDRTGPVLTVSSMYLKGVVLPSDNVTDGLHDIYFWIILDRFPTGTDPSVSDIFTGSDNSGSMIETLTRNRLNRKRFRILGSKKLVVGVNKKPQESLPHSRAAFNIFQRRRLVVAFKNDVSGGGRNDVERNRIYLSAASASGHTFRLYLNGIVNFYNGVIFQ |
NCBI Accession | YP_008400115.1 |
---|---|
Location | 1365-1736 |
Protein Name | V3 protein |
Coding Region | ATGGAGTTATTTTTCAATAGACCACGCTGTTTATTATGGCGTGTGTATGATCAAGTTTCTGAGTTTGGTTTGTATGATGGTGGTGAAGATGTTGATATCCCCATTGTTGGGGATGATGAAGATGAAGAAATGGTTACAACTGGATATGGTGAATTCGTTAAGACGTTGAAGAGACGTCGATCTGAGCGCGGAGAGGTGACAAAGACTTACAAGCGAAGAATTGCATTGACTGAACCTGATCGTAGTAGAACTGAAGTTGAAGAATTGAGAGATTATTTGTTAGAGGAAGATTATGATAAGCATAGAAGACGTCTGGACCTGGAGCTAGGCTCAGGCTTGCATAGTCCAGACAGTCGTTGTACAGTAATGTGA |
Protein Sequence | MELFFNRPRCLLWRVYDQVSEFGLYDGGEDVDIPIVGDDEDEEMVTTGYGEFVKTLKRRRSERGEVTKTYKRRIALTEPDRSRTEVEELRDYLLEEDYDKHRRRLDLELGSGLHSPDSRCTVM |
NCBI Accession | YP_008400116.1 |
---|---|
Location | 1898-2332 |
Protein Name | C2 protein |
Coding Region | ATGTTGAAAGAATATATAACACTGACGATGAACTCAACAATGCAGGAAGCGACGCACCGAAGGAGGAAGAGCCTGGTGATTGAAGGACCATCGAAGACGGGTAAAACGCAATGGGCTATATCATTGGGAATACATAACTACTGGTGTGAATCAGTAGACTTCAGTCTATACATAGACGACGCTTTGTACAATATTATTGACGATATACCATTCCAATATTTGCCTTGTAAAAAAGCCTTATTAGGTTGTCAATTCAATTACATTGCAAATGAAAAATATCGTCCAAAGCGGAAAATCAAAGGAGGGATCCCATCAATTGTTCTTTGTAATCCAGATAACTCTTACTATGATGCAATCACCAATTGGCATGCAACATTCAAGCCGTGGGCTGAAGAAAACATTATCTTTGTAAAAATTGATAGACCGTTGTACTGA |
Protein Sequence | MLKEYITLTMNSTMQEATHRRRKSLVIEGPSKTGKTQWAISLGIHNYWCESVDFSLYIDDALYNIIDDIPFQYLPCKKALLGCQFNYIANEKYRPKRKIKGGIPSIVLCNPDNSYYDAITNWHATFKPWAEENIIFVKIDRPLY |
NCBI Accession | YP_008400117.1 |
---|---|
Location | 2250-3044 |
Protein Name | C1 protein |
Coding Region | ATGGCATCAAGTAGCTCCTTCAATCTCCGCTCAAAAAACTTCTTCCTCACATACCCTCAGTGCCCAGTCCATAAACAGTTTGCCCTAGACTTCTTCAAATCCAAGTTCCAAAAAACCCTAGATTACGCTCTCATCGGAGAAGAAAAACATCAGAATGGCGAGCCACACCTACACGCCTTGCTCATCTTCAAAAAACGACAGGCTATTCGCAATCCAAAACACTTTGACATCACCATATCGTCTCATTCCTATCACCCCAATATCACAAAGCCCAGAGATGTCGCCGACGTGCTTAATTACGTCGGAAAAGAAGGAGATACCGTCGAGCACGGTACAAAGCCAACTCTCAAATCAAAGAAGCAATCCAGAGAACTGGATTTTGGAGAATTCCTACGAGTTGCAAATTCCAAAGACGAGTTTCTGCAACTCGTCAAACAACATTACCCCTACCAATACGTCCTCAATCTACAACGACTTGAATACTTTGCTGCTCAAACATGGCCTCCCACCCCTACCCCACATGCCAATCAGTGGACAGCTTGGAATAACCTTCCACCAGAAATTCATCTCTGGGTCCAAAACGAACTCTACGTGGTACGCAAAAGCTCAGCACAACGAAACCTTGGACCAGGAATAAACAATTTCCTTGAACAAGAAACAAAACGCGTCCAGCATATAATAGACGACAAGCTGGACGCGTATTACTTGGATTATGTTGAAAGAATATATAACACTGACGATGAACTCAACAATGCAGGAAGCGACGCACCGAAGGAGGAAGAGCCTGGTGATTGA |
Protein Sequence | MASSSSFNLRSKNFFLTYPQCPVHKQFALDFFKSKFQKTLDYALIGEEKHQNGEPHLHALLIFKKRQAIRNPKHFDITISSHSYHPNITKPRDVADVLNYVGKEGDTVEHGTKPTLKSKKQSRELDFGEFLRVANSKDEFLQLVKQHYPYQYVLNLQRLEYFAAQTWPPTPTPHANQWTAWNNLPPEIHLWVQNELYVVRKSSAQRNLGPGINNFLEQETKRVQHIIDDKLDAYYLDYVERIYNTDDELNNAGSDAPKEEEPGD |
NCBI Accession | YP_008400118.1 |
---|---|
Location | 2408-2890 |
Protein Name | C3 protein |
Coding Region | ATGGCGAGCCACACCTACACGCCTTGCTCATCTTCAAAAAACGACAGGCTATTCGCAATCCAAAACACTTTGACATCACCATATCGTCTCATTCCTATCACCCCAATATCACAAAGCCCAGAGATGTCGCCGACGTGCTTAATTACGTCGGAAAAGAAGGAGATACCGTCGAGCACGGTACAAAGCCAACTCTCAAATCAAAGAAGCAATCCAGAGAACTGGATTTTGGAGAATTCCTACGAGTTGCAAATTCCAAAGACGAGTTTCTGCAACTCGTCAAACAACATTACCCCTACCAATACGTCCTCAATCTACAACGACTTGAATACTTTGCTGCTCAAACATGGCCTCCCACCCCTACCCCACATGCCAATCAGTGGACAGCTTGGAATAACCTTCCACCAGAAATTCATCTCTGGGTCCAAAACGAACTCTACGTGGTACGCAAAAGCTCAGCACAACGAAACCTTGGACCAGGAATAA |
Protein Sequence | MASHTYTPCSSSKNDRLFAIQNTLTSPYRLIPITPISQSPEMSPTCLITSEKKEIPSSTVQSQLSNQRSNPENWILENSYELQIPKTSFCNSSNNITPTNTSSIYNDLNTLLLKHGLPPLPHMPISGQLGITFHQKFISGSKTNSTWYAKAQHNETLDQE |
1 |
Grapevine Red Blotch-Associated Virus, an Emerging Threat to the Grapevine Industry. Sudarshana MR, et al. Phytopathology. 2015 Jul;105(7):1026-32. doi: 10.1094/PHYTO-12-14-0369-FI. Epub 2015 Jun 25. PMID: 25738551 |
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2 |
Grapevine red blotch virus C2 and V2 are suppressors of post-transcriptional gene silencing. Weligodage HS, et al. Heliyon. 2023 Mar 17;9(3):e14528. doi: 10.1016/j.heliyon.2023.e14528. eCollection 2023 Mar. PMID: 36967958 |
3 |
Rumbaugh A, et al. J Sci Food Agric. 2023 May;103(7):3457-3467. doi: 10.1002/jsfa.12481. Epub 2023 Feb 20. PMID: 36727418 |
4 |
Hoyle V, et al. Viruses. 2022 May 26;14(6):1156. doi: 10.3390/v14061156. PMID: 35746628 |
5 |
Rumbaugh AC, et al. Int J Mol Sci. 2022 Oct 31;23(21):13248. doi: 10.3390/ijms232113248. PMID: 36362035 |
6 |
Causative Role of Grapevine Red Blotch Virus in Red Blotch Disease. Yepes LM, et al. Phytopathology. 2018 Jul;108(7):902-909. doi: 10.1094/PHYTO-12-17-0419-R. Epub 2018 May 17. PMID: 29436986 |
7 |
Sawyer E, et al. Front Plant Sci. 2023 Mar 10;14:1117869. doi: 10.3389/fpls.2023.1117869. eCollection 2023. PMID: 36968421 |
8 |
Spatiotemporal spread of grapevine red blotch-associated virus in a California vineyard. Cieniewicz EJ, et al. Virus Res. 2017 Sep 15;241:156-162. doi: 10.1016/j.virusres.2017.03.020. Epub 2017 Apr 7. PMID: 28392444 |
9 |
Flasco M, et al. Phytopathology. 2021 Oct;111(10):1851-1861. doi: 10.1094/PHYTO-02-21-0061-R. Epub 2021 Nov 9. PMID: 33736453 |
10 |
Buchs N, et al. Front Plant Sci. 2018 Nov 29;9:1735. doi: 10.3389/fpls.2018.01735. eCollection 2018. PMID: 30555495 |