Eragrostis curvula streak virus

Basic Information

Genus	Eragrovirus
NCBI Assembly	GCF_000884795.1
Isolate	South Africa
Release date	2015/2/22
Submitter	Varsani,A., Shepherd,D.N., Dent,K., Monjane,A.L., Rybicki,E.P., Martin,D.P.
Host	Eragrostis curvula
Vector	Dialeurodes citri
Download	Genome \|GFF3 \|PEP \|CDS

Genomic Organization

JBrowse

Genome

NC_012664

TAAGATTCCCGCTCCCCCCCCCCGCGAGCGCGTAGCGCGAGCCCGCCGGCCCATTTCGAAATAAAGATGTCAGGCCCACCTCCCTGCGATCGCACCGAGCCAGTACAGACAATACCTTTGTTGCTTTGCCATGGCCGGCGCAGTCTGCCGCTTTGCCATGCGGAGGTCCTTCCACCACAAGACTTAGGTCAGATCCGTTACTTGGTAAAGCGATTCAAGGCCCGTGTCCTTATTAGGACGATTGCGGAACAGTACAGCGGCAGTTCCTTAGCAGATAAGCTTGAGCTTATCTGGACGTTCTGTGATACCTTACAACATGAAGCGGAAGAGGAATGAAGCAGTTCCTGCGGGTCGCCGTTATCCTCAACGGCGTCGTATGTACTACCGTCCTCGTAAGCCTTTCTTTCCCCGCCCAGTGTATACAAGGTCCTCCAGTGTTAAACGTCCTGCCCTACAGATTAGTGGTCTCGTTTACGGGAACTCGAGTACGGGAGCCGTTAAAATTAACACTGGAGCACTTAGCCTTGTCACTGCATTTAAGGCGGGGACTGCAGAAGAGTGCAGACACTCTAATCAAACAATTGTGAAGTCCTTTGACATTAGTGGTACTCTGTACGTTCAGTCTCCCACTAGTTCAAACTGTGGTCCTGTTGTTGTTTACTTCTGGCTAATCTATGATTCAGAGCCTAGGCAGGCTATTCCTAACATAACAGATGTGTTCTCCATGCCTTGGACTAGTGTGCCGTCAAGTTGGCGTATATCTCGCTCTTCTTCACACCGATTTGTTGTGAAGAGGAAGTGGCATTACGAATTGATGTCAGATGGTGTCCTTCCCCAGAGTAACACGAAAGTGCAGACTCATAATCCCGTTTCCAGGAACATGATGGACTTCTCTAAGTACATCAATAATCTTGGTGTGCCAACGGAGTGGATGAGTACTGGTGATGGAACCATTGGTGATATCAAGAAGGGCGCGTTGTACCTCGCTGCTGCCTGCCGACAGGGAATTGTTGGAGATGCAACCAAGATTACTATAGAAGTAGAGTTTATCGGGCAGTCTCGTACTTATTTCAAGAGCATTGGCTACCAGTGATGTACTTCTTATTGCGAAACATTGTTGAATAAACATGCTAAACATAATGTTTGTTGTTGCTGTGAGCCGGGAGGCGAGGTCCGTCAAGGCCGAAGGCCTGACGGTTCCTCTGAGGCGCGAAGCGCGAAGCGCGAGTGCCGTGGAACCATATTTGCCGTTAACATTTCCTTAATTAAACGCCCCTGCGAGGCGGCGGGCGAAGCCCGACGACATACGCGCAGCGTATTACACAAGAGTAAAACACTAACAAGAATTGATACTCTCATCCCATAGTGCCTCATTAGGCCCCATGAGGTTACAGTTACAATCCACACACTTATCTAAAATACACTGAGCGCTGTGTCGCTCCGAGAACTCAAAATAAGTTGTAGGTATGTTACATGCGTCTTCATACTCCTGCTCGGCCCTTGACTTGAAGTGCGGCATTGGCATGAATTGATGTACACGGCCACAGTTACACGGCTTGGTCACCTGGATCACTATCTGAAGCCCACATTGGAGATTCAGGGTCATCTTCTCCGGTTTGCTCCCGCAGAGTAAGTGAGACTCCGCCAAAGAGAGCATCTTGGATATCCACGAAGACCGCATTTTTGCTAGTCCACGATCTAAGTTGGTGATTTTCTTCACAGTCAAGGAAGCATTTATAGGACTGGTCCGAGTTACAGAGCACGATAGCTGGTTTACCACCTTTAACCAGAACCGGTTTCCCATATTTCAGGTTACTTTGCCAGTCTTTCTGAGCTCCTAGAAACTCCTTCCAATGCTTTAGATATTTAGGGGTGACGTCATCGATGACGTTGTAACTTGCCTCGTTGTCGAATACGGCTCCGTTGAGGTCCAGATGTCCGCTGAGATAGTTGTGACGGCCCAATGATCTAGCCCAAGCCGTTTTTCCTGTACGGGAATCACCCTCAATTATCAATGATAATGGTCTATCCGGTATAGGATCTGCCCTTAAGTTATTTGCTACCCAGTCGGATAAGACTCTCGGTACAGAAAAACTGCTCTCTGAATATTTTGGAACAAAACTTGCTCGTACCTCAGACCATATGCGCCTGGCGTTGGTTACCAGGTTATGGTGTTGCAGCCAGAATGTACGCGGCTCGTTGTCTTTCACAAGCTGCAGAGCCTCCTCGATTGTACCTGAATTCACCGCTTGGTGCCACCATTCGTCTTGCTCAGCCTTTCTCTTGCGCCCCGTCAGCCTCTTGTCACATGGTACAGTACCATGTTCGTAGAAAGACCCAGCTTCTTTCTGTATGTACTTCAGACTCTTGGATACGGAACGACAAGTCTCAATCTTCGGATGGAATTCCCCGAAGTCGAATATACGAGGGTCTCGTATATCTCTACGCTCACTTGTACATACGATAGCATGAAGATGGTTGTTACCATCTTGGTGTTTTTCCTGTTGTACGCGTACGTACACTACGTGGCTAGCAAGAGTTGAGTGGGAAGTGAGGAACTCTCCCACATCCTTAGGCTCTCTTGGGCATTGTGAGTAAGTGAGGAAGAACGCCTTCCCTTGGATCCTAAATCTATGGCTGGATGAAGCCATCCTCAAACTAGTTTGGTCAAACCAAAACCCCTGGGTCAATTGTGAGGAATGAGGATGGAGGTTGTTATATAGCCTCTGGGGCCTCTGGGGGGGGGGGAGCGTC

Gene Information

NCBI Accession	YP_002875757.1
Location	67-336
Protein Name	movement protein
Coding Region	ATGTCAGGCCCACCTCCCTGCGATCGCACCGAGCCAGTACAGACAATACCTTTGTTGCTTTGCCATGGCCGGCGCAGTCTGCCGCTTTGCCATGCGGAGGTCCTTCCACCACAAGACTTAGGTCAGATCCGTTACTTGGTAAAGCGATTCAAGGCCCGTGTCCTTATTAGGACGATTGCGGAACAGTACAGCGGCAGTTCCTTAGCAGATAAGCTTGAGCTTATCTGGACGTTCTGTGATACCTTACAACATGAAGCGGAAGAGGAATGA
Protein Sequence	MSGPPPCDRTEPVQTIPLLLCHGRRSLPLCHAEVLPPQDLGQIRYLVKRFKARVLIRTIAEQYSGSSLADKLELIWTFCDTLQHEAEEE

NCBI Accession	YP_002875758.1
Location	317-1093
Protein Name	coat protein
Coding Region	ATGAAGCGGAAGAGGAATGAAGCAGTTCCTGCGGGTCGCCGTTATCCTCAACGGCGTCGTATGTACTACCGTCCTCGTAAGCCTTTCTTTCCCCGCCCAGTGTATACAAGGTCCTCCAGTGTTAAACGTCCTGCCCTACAGATTAGTGGTCTCGTTTACGGGAACTCGAGTACGGGAGCCGTTAAAATTAACACTGGAGCACTTAGCCTTGTCACTGCATTTAAGGCGGGGACTGCAGAAGAGTGCAGACACTCTAATCAAACAATTGTGAAGTCCTTTGACATTAGTGGTACTCTGTACGTTCAGTCTCCCACTAGTTCAAACTGTGGTCCTGTTGTTGTTTACTTCTGGCTAATCTATGATTCAGAGCCTAGGCAGGCTATTCCTAACATAACAGATGTGTTCTCCATGCCTTGGACTAGTGTGCCGTCAAGTTGGCGTATATCTCGCTCTTCTTCACACCGATTTGTTGTGAAGAGGAAGTGGCATTACGAATTGATGTCAGATGGTGTCCTTCCCCAGAGTAACACGAAAGTGCAGACTCATAATCCCGTTTCCAGGAACATGATGGACTTCTCTAAGTACATCAATAATCTTGGTGTGCCAACGGAGTGGATGAGTACTGGTGATGGAACCATTGGTGATATCAAGAAGGGCGCGTTGTACCTCGCTGCTGCCTGCCGACAGGGAATTGTTGGAGATGCAACCAAGATTACTATAGAAGTAGAGTTTATCGGGCAGTCTCGTACTTATTTCAAGAGCATTGGCTACCAGTGA
Protein Sequence	MKRKRNEAVPAGRRYPQRRRMYYRPRKPFFPRPVYTRSSSVKRPALQISGLVYGNSSTGAVKINTGALSLVTAFKAGTAEECRHSNQTIVKSFDISGTLYVQSPTSSNCGPVVVYFWLIYDSEPRQAIPNITDVFSMPWTSVPSSWRISRSSSHRFVVKRKWHYELMSDGVLPQSNTKVQTHNPVSRNMMDFSKYINNLGVPTEWMSTGDGTIGDIKKGALYLAAACRQGIVGDATKITIEVEFIGQSRTYFKSIGYQ

NCBI Accession	YP_002875759.1
Location	1548-2651
Protein Name	replication associated protein
Coding Region	ATGGCTTCATCCAGCCATAGATTTAGGATCCAAGGGAAGGCGTTCTTCCTCACTTACTCACAATGCCCAAGAGAGCCTAAGGATGTGGGAGAGTTCCTCACTTCCCACTCAACTCTTGCTAGCCACGTAGTGTACGTACGCGTACAACAGGAAAAACACCAAGATGGTAACAACCATCTTCATGCTATCGTATGTACAAGTGAGCGTAGAGATATACGAGACCCTCGTATATTCGACTTCGGGGAATTCCATCCGAAGATTGAGACTTGTCGTTCCGTATCCAAGAGTCTGAAGTACATACAGAAAGAAGCTGGGTCTTTCTACGAACATGGTACTGTACCATGTGACAAGAGGCTGACGGGGCGCAAGAGAAAGGCTGAGCAAGACGAATGGTGGCACCAAGCGGTGAATTCAGGTACAATCGAGGAGGCTCTGCAGCTTGTGAAAGACAACGAGCCGCGTACATTCTGGCTGCAACACCATAACCTGGTAACCAACGCCAGGCGCATATGGTCTGAGGTACGAGCAAGTTTTGTTCCAAAATATTCAGAGAGCAGTTTTTCTGTACCGAGAGTCTTATCCGACTGGGTAGCAAATAACTTAAGGGCAGATCCTATACCGGATAGACCATTATCATTGATAATTGAGGGTGATTCCCGTACAGGAAAAACGGCTTGGGCTAGATCATTGGGCCGTCACAACTATCTCAGCGGACATCTGGACCTCAACGGAGCCGTATTCGACAACGAGGCAAGTTACAACGTCATCGATGACGTCACCCCTAAATATCTAAAGCATTGGAAGGAGTTTCTAGGAGCTCAGAAAGACTGGCAAAGTAACCTGAAATATGGGAAACCGGTTCTGGTTAAAGGTGGTAAACCAGCTATCGTGCTCTGTAACTCGGACCAGTCCTATAAATGCTTCCTTGACTGTGAAGAAAATCACCAACTTAGATCGTGGACTAGCAAAAATGCGGTCTTCGTGGATATCCAAGATGCTCTCTTTGGCGGAGTCTCACTTACTCTGCGGGAGCAAACCGGAGAAGATGACCCTGAATCTCCAATGTGGGCTTCAGATAGTGATCCAGGTGACCAAGCCGTGTAA
Protein Sequence	MASSSHRFRIQGKAFFLTYSQCPREPKDVGEFLTSHSTLASHVVYVRVQQEKHQDGNNHLHAIVCTSERRDIRDPRIFDFGEFHPKIETCRSVSKSLKYIQKEAGSFYEHGTVPCDKRLTGRKRKAEQDEWWHQAVNSGTIEEALQLVKDNEPRTFWLQHHNLVTNARRIWSEVRASFVPKYSESSFSVPRVLSDWVANNLRADPIPDRPLSLIIEGDSRTGKTAWARSLGRHNYLSGHLDLNGAVFDNEASYNVIDDVTPKYLKHWKEFLGAQKDWQSNLKYGKPVLVKGGKPAIVLCNSDQSYKCFLDCEENHQLRSWTSKNAVFVDIQDALFGGVSLTLREQTGEDDPESPMWASDSDPGDQAV

References More References in PubMed

1	A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family. Varsani A, et al. Virol J. 2009 Mar 25;6:36. doi: 10.1186/1743-422X-6-36. PMID: 19321000
2	Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus. Varsani A, et al. Arch Virol. 2014 Aug;159(8):2193-203. doi: 10.1007/s00705-014-2050-2. Epub 2014 Mar 22. PMID: 24658781

A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family.

Varsani A, et al. Virol J. 2009 Mar 25;6:36. doi: 10.1186/1743-422X-6-36.

PMID: 19321000

Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus.

Varsani A, et al. Arch Virol. 2014 Aug;159(8):2193-203. doi: 10.1007/s00705-014-2050-2. Epub 2014 Mar 22.

PMID: 24658781