Horseradish curly top virus

Basic Information

Genus Curtovirus
NCBI Assembly GCF_000837985.1
Release date 2015/2/12
Submitter Klute,K.A., Nadler,S.A., Stenger,D.C.
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_002543
ACCGGATGGCCGCGATGCTACCACGTGTCTTAAAATTGTTGGCTGGTCAAAAGTGGCGGCGACCGGTTTTATAAAGTAAAGTAAAGTAGACCCCACTAGGAAACTTGGTCGGCAAGTTTAACTTTATCCTTTTAAATAAATACGGTATTTGTACATATATTTATATATGTACAAATGATGGTATGTCTACCAGACTGGGTATTCCTACTATTCATAGCTAGTATTCTTCTACAGGCTTGTACGAATTTTTATGGGACCTTTCACAGTGGGTCAATTTCCAAGAAATTATCCAGCCTTGTTAGCCGTTTCGACGAGTTGTTTTTTCAGATACAACAAGTGGTGTATACTAGGTATCCGTCACGAAGTCGAATCGTTAACCCTAGAAGAAGGGGAAGCCTTTCTGGGATTCCAGAAGGAGGTGAAGAAACTGTTGAAGCGTAAGTGTACTTTTTCTAGAAAGTGTGAGTTGTATGAGGAGATATACAAGAAATACTTATCAGATGGGCCAGAAGAGAAAGGCTCCCTACCAACCGTCATGGTCGAAGAAGAGGAAGACTGGGCCCATGAGAAAATACCAATGGAAGAGGCCTGCTCGCAAGACGAAGGCCCTGAAATTGAAGATGTATGATGATATGCTTGGTGCTGGTGGATTGGGTTCTACCATTAGCAATAATGGTATGATTACTATGTTGAATAATTATGTCCAGGGTATTGGAGATAGTCAACGGTCTACTAACACGACTATTACGAAGCATATGAAGTTTGATATGGCGCTAATGGGCAGTTCTAGTTTTTGGGATACTCCAAATTACATGACTCAATATCATTGGATTATCATAGACAAGGATGTTGGTTCGGTGTTTCCTGTTAAGTTGGATGATATATTTGATATTCCATCAAATGGTCAAGCTATGCCTTCTACTTTCCGCATTAGGAGAGATAGTAATGAGAGGTTTATTGTGAAGAGGAAGTGGACTACACATTTAATGTCTACTGGAGCAGCTTATGGTAGCAAGGATATTTACAAGGGTCCTTCTATGCCTAATTACAAGAAGGGTATGAACATCAATATTCGCAACTTGAATGTGAAGACTATATGGAAGGATACTGGTGGCGGGAAATACGAAGATGTTAAGGAGAATGCTATACTTTATATTGTTGTTAATGATAATGCCGATAATACTAATATGTATGCTACATTATTTGGCAATTGCCGATGTTATTTTTATTAATAAAATAAGTAATGTATTTTAAAGAATGTGCTTGGGTTCCTACTTTTGCCCTGCCATGTCCCCTTATCCTTAGGGTTTAGTTTTGAAGCAGAGCGAGCGCAGCGAGCGTAAACAACCCGAATAAACGGACTAGGCTTTGATCTATAAATGCAGGGCTTTAGCCCTGCATTTCTAGACAAAGGCGTCAATAGACTGTTAACTAACAGTTATAGTATCAAACGCAATGAACCCGAAGGGTTCACAAAAAAAAAGCAAGCGTAACTGTCAAGTAGCGCGCAGAAGGGGGAAAAATCAAGATACACACAAAAAGGAAGACAATATATTATTAAACTGCGCTTCTTTATTAAAATAGAACTTTAAGAGTAGTACAATATGAGTCGACGATTTCTAAGATGTTTACATCGTATGTAAGTAGAGCAAGATTGAAAGAAGATCCTATTTGTTCTATGTCCAGATGAGTTATATCGTCTACTCTGAACAAGATACGTACAATCCTTATCCATTCATCGATTACCAAACCAAAAGATTGGTCTGAACGATCAAGAAGAAAAGAAAAATAGTAAGTCATAAATGATCCAGGTGGTACTGTCCTCCCTCGGCCTTCGATAACCTTGATTTTCAAAGTGTAAAGATCCGGCTGCTTCTTTGTTGCTTCGATCTCCCATATTGTGCGCCTGAGATTTTTTATTGAATATTTAATGGATTCCATTGTCGAATAATGGAGTATCCAGGAATATAAAAATGGCATTATATAATGTCCATTGTCTCAAGCCGTCATTTTCAGGCTTGTCTAAAAAATCTCGAAAGCTAGATCCCTCACCAGGATTACAAAGTATAATGGTGGGGACCCCTCCTCTAATTTGAACCGGTTTCCCGTATTTGCAATTGCTTTGCCAGTCCCTTTGGGCCCCGATGAGCTCTTTCCAATGCTTCATCTTCAAGTATGTCGGGGCTACGTCATCTATGACGTTATATTCCACTTCGTTGGAATACACGCGCATGTTGAAGTCGAGGTGTCCACACAAGTAGTTGTGTGTACCTAACGCTCTTGCCCAGCACGTTTTTCCCGTTCTACTGTTCCCTTCTATGATAATGGATTTGGCCTTATGGCTGTCGGCAACAGGCCTGCCAAAGTAATCATCGGCCCACTCTTGCATTTCTTCGGGGACGTTTGTGAAGGAGGAGAGAGGATACGGCGGATTCCAGGGTTCTGGTGGTTTCGCGAATATGTGTTCAAGGTTGGCTTTTACATTGTGATGTTGAGTCACGAATGTCTTTGGATCCCCAGCCTTTATGATGTCAAGAGCCTCTCGTACACCTCCTGCATTGACGGCGTTGTGGTAGACGGCGTCCTTGTTTGCTTTTGTTCCCCCAGAGACCTTGTATTGTCCGGATTCACAATAATCACCTTCTTTGGTGATGTAATTCTTGACGGCATTGGTGTCTTTGGCTGATTGGACATTAGGATGGAAAGAGGTACTCCGTTGGGGGTGAGTAATGTCGAAAAATCTGCAGTCCTTGATGTTGGACTTTCCTGAAAGTTGTATAAGGCAGTGGAGGTGCGGTGTTCCGTCGGCGTGTCTCTCGGCGGCGACTCTGATATATGTTGGTTTGACGACTGTCCAGTTGAGGTTTTGAAGCAGTTGAAGCATTTCATCTTTTGGTATTGTACACTGAGGATAAGTGAGAAAAATATTTCTTGCTTGAATACGGAAAGAATTAGGCTGTCTTGGCATTTTGAACTGGGACTCCAGGTTTTAGGTTTAATCCTGTCATATTCGTGGAGTTCTGGAGTCTCATTTATACTAAAACCTCTTAAGGCCAATAGCGGCCATCCGTTCTAATATT

Gene Information

NCBI Accession NP_066181.1
Location 175-441
Gene Name V3
Protein Name movement protein
Coding Region ATGATGGTATGTCTACCAGACTGGGTATTCCTACTATTCATAGCTAGTATTCTTCTACAGGCTTGTACGAATTTTTATGGGACCTTTCACAGTGGGTCAATTTCCAAGAAATTATCCAGCCTTGTTAGCCGTTTCGACGAGTTGTTTTTTCAGATACAACAAGTGGTGTATACTAGGTATCCGTCACGAAGTCGAATCGTTAACCCTAGAAGAAGGGGAAGCCTTTCTGGGATTCCAGAAGGAGGTGAAGAAACTGTTGAAGCGTAA
Protein Sequence MMVCLPDWVFLLFIASILLQACTNFYGTFHSGSISKKLSSLVSRFDELFFQIQQVVYTRYPSRSRIVNPRRRGSLSGIPEGGEETVEA

NCBI Accession NP_066182.1
Location 251-628
Gene Name V2
Protein Name hypothetical protein
Coding Region ATGGGACCTTTCACAGTGGGTCAATTTCCAAGAAATTATCCAGCCTTGTTAGCCGTTTCGACGAGTTGTTTTTTCAGATACAACAAGTGGTGTATACTAGGTATCCGTCACGAAGTCGAATCGTTAACCCTAGAAGAAGGGGAAGCCTTTCTGGGATTCCAGAAGGAGGTGAAGAAACTGTTGAAGCGTAAGTGTACTTTTTCTAGAAAGTGTGAGTTGTATGAGGAGATATACAAGAAATACTTATCAGATGGGCCAGAAGAGAAAGGCTCCCTACCAACCGTCATGGTCGAAGAAGAGGAAGACTGGGCCCATGAGAAAATACCAATGGAAGAGGCCTGCTCGCAAGACGAAGGCCCTGAAATTGAAGATGTATGA
Protein Sequence MGPFTVGQFPRNYPALLAVSTSCFFRYNKWCILGIRHEVESLTLEEGEAFLGFQKEVKKLLKRKCTFSRKCELYEEIYKKYLSDGPEEKGSLPTVMVEEEEDWAHEKIPMEEACSQDEGPEIEDV

NCBI Accession NP_066183.1
Location 471-1232
Gene Name V1
Protein Name capsid protein
Coding Region ATGAGGAGATATACAAGAAATACTTATCAGATGGGCCAGAAGAGAAAGGCTCCCTACCAACCGTCATGGTCGAAGAAGAGGAAGACTGGGCCCATGAGAAAATACCAATGGAAGAGGCCTGCTCGCAAGACGAAGGCCCTGAAATTGAAGATGTATGATGATATGCTTGGTGCTGGTGGATTGGGTTCTACCATTAGCAATAATGGTATGATTACTATGTTGAATAATTATGTCCAGGGTATTGGAGATAGTCAACGGTCTACTAACACGACTATTACGAAGCATATGAAGTTTGATATGGCGCTAATGGGCAGTTCTAGTTTTTGGGATACTCCAAATTACATGACTCAATATCATTGGATTATCATAGACAAGGATGTTGGTTCGGTGTTTCCTGTTAAGTTGGATGATATATTTGATATTCCATCAAATGGTCAAGCTATGCCTTCTACTTTCCGCATTAGGAGAGATAGTAATGAGAGGTTTATTGTGAAGAGGAAGTGGACTACACATTTAATGTCTACTGGAGCAGCTTATGGTAGCAAGGATATTTACAAGGGTCCTTCTATGCCTAATTACAAGAAGGGTATGAACATCAATATTCGCAACTTGAATGTGAAGACTATATGGAAGGATACTGGTGGCGGGAAATACGAAGATGTTAAGGAGAATGCTATACTTTATATTGTTGTTAATGATAATGCCGATAATACTAATATGTATGCTACATTATTTGGCAATTGCCGATGTTATTTTTATTAA
Protein Sequence MRRYTRNTYQMGQKRKAPYQPSWSKKRKTGPMRKYQWKRPARKTKALKLKMYDDMLGAGGLGSTISNNGMITMLNNYVQGIGDSQRSTNTTITKHMKFDMALMGSSSFWDTPNYMTQYHWIIIDKDVGSVFPVKLDDIFDIPSNGQAMPSTFRIRRDSNERFIVKRKWTTHLMSTGAAYGSKDIYKGPSMPNYKKGMNINIRNLNVKTIWKDTGGGKYEDVKENAILYIVVNDNADNTNMYATLFGNCRCYFY

NCBI Accession NP_066184.1
Location 1576-1980
Gene Name C2
Protein Name hypothetical protein
Coding Region ATGCCATTTTTATATTCCTGGATACTCCATTATTCGACAATGGAATCCATTAAATATTCAATAAAAAATCTCAGGCGCACAATATGGGAGATCGAAGCAACAAAGAAGCAGCCGGATCTTTACACTTTGAAAATCAAGGTTATCGAAGGCCGAGGGAGGACAGTACCACCTGGATCATTTATGACTTACTATTTTTCTTTTCTTCTTGATCGTTCAGACCAATCTTTTGGTTTGGTAATCGATGAATGGATAAGGATTGTACGTATCTTGTTCAGAGTAGACGATATAACTCATCTGGACATAGAACAAATAGGATCTTCTTTCAATCTTGCTCTACTTACATACGATGTAAACATCTTAGAAATCGTCGACTCATATTGTACTACTCTTAAAGTTCTATTTTAA
Protein Sequence MPFLYSWILHYSTMESIKYSIKNLRRTIWEIEATKKQPDLYTLKIKVIEGRGRTVPPGSFMTYYFSFLLDRSDQSFGLVIDEWIRIVRILFRVDDITHLDIEQIGSSFNLALLTYDVNILEIVDSYCTTLKVLF

NCBI Accession NP_066185.1
Location 1928-2968
Gene Name C1
Protein Name rep
Coding Region ATGCCAAGACAGCCTAATTCTTTCCGTATTCAAGCAAGAAATATTTTTCTCACTTATCCTCAGTGTACAATACCAAAAGATGAAATGCTTCAACTGCTTCAAAACCTCAACTGGACAGTCGTCAAACCAACATATATCAGAGTCGCCGCCGAGAGACACGCCGACGGAACACCGCACCTCCACTGCCTTATACAACTTTCAGGAAAGTCCAACATCAAGGACTGCAGATTTTTCGACATTACTCACCCCCAACGGAGTACCTCTTTCCATCCTAATGTCCAATCAGCCAAAGACACCAATGCCGTCAAGAATTACATCACCAAAGAAGGTGATTATTGTGAATCCGGACAATACAAGGTCTCTGGGGGAACAAAAGCAAACAAGGACGCCGTCTACCACAACGCCGTCAATGCAGGAGGTGTACGAGAGGCTCTTGACATCATAAAGGCTGGGGATCCAAAGACATTCGTGACTCAACATCACAATGTAAAAGCCAACCTTGAACACATATTCGCGAAACCACCAGAACCCTGGAATCCGCCGTATCCTCTCTCCTCCTTCACAAACGTCCCCGAAGAAATGCAAGAGTGGGCCGATGATTACTTTGGCAGGCCTGTTGCCGACAGCCATAAGGCCAAATCCATTATCATAGAAGGGAACAGTAGAACGGGAAAAACGTGCTGGGCAAGAGCGTTAGGTACACACAACTACTTGTGTGGACACCTCGACTTCAACATGCGCGTGTATTCCAACGAAGTGGAATATAACGTCATAGATGACGTAGCCCCGACATACTTGAAGATGAAGCATTGGAAAGAGCTCATCGGGGCCCAAAGGGACTGGCAAAGCAATTGCAAATACGGGAAACCGGTTCAAATTAGAGGAGGGGTCCCCACCATTATACTTTGTAATCCTGGTGAGGGATCTAGCTTTCGAGATTTTTTAGACAAGCCTGAAAATGACGGCTTGAGACAATGGACATTATATAATGCCATTTTTATATTCCTGGATACTCCATTATTCGACAATGGAATCCATTAA
Protein Sequence MPRQPNSFRIQARNIFLTYPQCTIPKDEMLQLLQNLNWTVVKPTYIRVAAERHADGTPHLHCLIQLSGKSNIKDCRFFDITHPQRSTSFHPNVQSAKDTNAVKNYITKEGDYCESGQYKVSGGTKANKDAVYHNAVNAGGVREALDIIKAGDPKTFVTQHHNVKANLEHIFAKPPEPWNPPYPLSSFTNVPEEMQEWADDYFGRPVADSHKAKSIIIEGNSRTGKTCWARALGTHNYLCGHLDFNMRVYSNEVEYNVIDDVAPTYLKMKHWKELIGAQRDWQSNCKYGKPVQIRGGVPTIILCNPGEGSSFRDFLDKPENDGLRQWTLYNAIFIFLDTPLFDNGIH

NCBI Accession NP_066186.1
Location 2524-2889
Gene Name C4
Protein Name hypothetical protein
Coding Region ATGAAATGCTTCAACTGCTTCAAAACCTCAACTGGACAGTCGTCAAACCAACATATATCAGAGTCGCCGCCGAGAGACACGCCGACGGAACACCGCACCTCCACTGCCTTATACAACTTTCAGGAAAGTCCAACATCAAGGACTGCAGATTTTTCGACATTACTCACCCCCAACGGAGTACCTCTTTCCATCCTAATGTCCAATCAGCCAAAGACACCAATGCCGTCAAGAATTACATCACCAAAGAAGGTGATTATTGTGAATCCGGACAATACAAGGTCTCTGGGGGAACAAAAGCAAACAAGGACGCCGTCTACCACAACGCCGTCAATGCAGGAGGTGTACGAGAGGCTCTTGACATCATAA
Protein Sequence MKCFNCFKTSTGQSSNQHISESPPRDTPTEHRTSTALYNFQESPTSRTADFSTLLTPNGVPLSILMSNQPKTPMPSRITSPKKVIIVNPDNTRSLGEQKQTRTPSTTTPSMQEVYERLLTS