Beet curly top virus

Basic Information

Genus Curtovirus
NCBI Assembly GCF_000843505.1
Release date 2018/11/26
Submitter Stanley,J., Markham,P.G., Callis,R.J., Pinner,M.S.
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_001412
TGTACTCCGATGACGTGGCTTAGCATATTAACATATCTATTGGAGTATTGGAGTATTATATATATTAGTACAACTTTCATAAGGGCCATCCGTTATAATATTACCGGATGGCCCGAAAAAAATGGGCACCCAATCAAAACGTGACACGTGGAAGGGGACTGTTGAATGATGTGACGTTTTTGAGCGGGAAACTTCCTGAAGAAGATTCCTGCGGGAAACTTCCTGAAGAAGATTCCTTTCAGATAAGATTTGTTGACTGGTCAAAAGAAGGGGACAACTTTATTAAAGTAACTTTACTTTAGTAAAAGTAAAGTAAGTGTGCCCCACAGGAAACTTGCTCAGCAAGTTTTGAATTATGTCGTTTTATATACGTTATTTTTACATGTATATGTAATTATAAATGATGGTCTGTCTACCAGACTGGTTATTTTTGCTATTTATCTTCAGTATTCTACTGCAATCAGGTACGAACTTTTATGGGACCTTTCAGAGTGGATCAATTTCCAGACAATTATCCAGCCTTTCTAGCAGTATCGACCAGTTGTTTCTTAAGGTACAACAGGTGGTGTATACTAGGTATCCATCAAGAGATAGGGTCTCTGACCCTAGAAGAAGGCGAGGTCTTTCGTCAATTCCAGAAGGAAGTGAAGAAGCTACTGAGGTGTAAGGTTAATTTTCATAGGAAGTGTTCGTTGTATGAGGAAATATACAAGAAATACGTATACAATGTCCCAGAAAAGAAAGGTGAATCCTCAAAGTGCGTGGCCGAAGAAGAGGAGGACTAGTACGACTTCGAGGAAATACCAATGGAGGAGACCTGTGACAAAAAACAGGACTCTGAAGTTAAAGATGTATGATGATATGTTGGGTGCTGGTGGTATAGGATCTACCATTAGTAATAATGGTATGATTACTATGTTGAATAATTATGTCCAGGGTATTGGTGATAGTCAGAGAGCGAAGAACGTTACTGTGACGAAGCATTTGAAGTTTGATATGGCTCTTATGGGGAGTTCTCAGTTCTGGGAGACTCCTAATTATATGACCCAATATCATTGGATTATCATAGACAAGGATGTTGGGTCAGTGTTTCCTACTAAGTTATCGAGTATATTTGATATTCCCGATAACGGTCAGGCTATGCCGTCTACTTATCGTATTCGAAGAGATATGAACGAGAGGTTTATTGGGAAGAAGAAATGGAGAACTCATTGGATGTCTACTGGTACTGGATATGGAGGGAAGGAGACTTACAAGGCTCCTTCAATGCCAAATTACAAGAAACCGATGAATATCAATGTGCGCAATTTGAACATGAGGACTATTTGGAAAGACACCGGTGGTGGGAAGTATGAAGACGTGAAGGAGAATGCTTTACTCTATGTTGTTGTTAATGATAATACGGATAATACTAATATGTATGCCACATTATTTGGCAATTGTAGATGCTATTTTTATTAATAATATTTATTATTAATAATGAAATTAGTACAAGTTCATTGCAACACTCTGGTTCTGAATTACACTTGATACAAAAGTAAATTCTTCATACAGGACATGATTTAAACCTCTAATTACATTATTAATACAAATTAAACCTAGATTATCCAAGTATATCTCTAGTCTCTTTTTCAAGACCTTCAAGAAACGGGGTCCAGTCAATATCCTGTTCGATCCAGTTATCGTCAGCTCTATCCAGCACTTGTGAAGATTCAACGCTCTCCGGAGGTTGTAGTTGAATCTGATTTGTATCTTCAGTTGATAGATTGGCCCGTATCTCTCGAACCATAGGAGTTTCATATACAGTGGATTCGGTACATTCTCGAATTCGACGGAATTTGTTGCCTGATGGAGAGTAATAGGTTCCCCTGTGCGAAAATCCTCTATTACATTCATGGTGTATTGTGAAGTGGCAGTTACAGGGTAGAGTCACCTTGCGAGGATGCTGCTGCTTGGTTATTAAAGAGCGGACCTTGGAGTTTGCAGAAGGTTGAATTATGTAATGTCCAGGACTTAAGGGCTTCATTTTCTGGTTTTTCAAGAAATTGTTGGTATGAGCTCTCAGGTCCTGGATTGCATAATATAATGCAGGGGATACCACCTTTAATGACACGTGGTTTTCCATACTTTAAGTTTGTCTGCCACTCCTTTTGTGCTCCAATAAGGTGTTTCCAGTGTTTCATCTTTAAGTAAGTGGGATCTACGTCATCAATGACGTTGTATTCCACTTCATCATAATACGTTCTAGGGCTAAAATCTAAGTGCCCTGTGATGTAATTGTGGGCCCCTAAAGATCTAGCCCACATAGTCTTCCCTGTTCTTGAATCACCCTCTACTATGATACTATTATATCTTAAAGGCCGCGCAGCGGCATCAACCCCGAAATATGCATCAGCCCATTCTTGCATTTCCTCAGGAACGTTTGTGAATGAGGACAGAGGAAATAGTGGAGTCCATGGATCAGGTGGCCTCTGAAATATCTTTTGAGCATTGTTCAAAAGATTGTGATGTTGAAGGAAGTAATCCTTTGGTTGTTCTTCCTTCAATATTTGAAGTGCTTGGTCAAGAGAAGTTGCGTTTAACGCCTTGGCATATGAGTCGTTAGCTGTCTGTTGACCTCCTCTAGCACTTCTACCGTCGATCTGGAATTCTCCCCATTCAATTGTGTCTCCGTCCTTGTCGACGTAGGACTTGACGTCGGAGCTGGATTTAGCTCTCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAATAATCTGATATTTGTGATCTGAACTTTTCCTTCGAGTTGAAGCAGGACGTGGAGATGAGGTTGCCCATCTTCGTGTAGCTCTCTGGCAATTTTAATATATTTTTTATTAGATGAAAGTTGTATTCTTTGAATTTGCTCAAGAGCTTCTTCTTTTGAAAGAGAACACTGAGGATATGTAAGAAATATGTTTTTTGCTTGAATACGAAATCTTTTAGTAGGAGGCATN

Gene Information

NCBI Accession NP_040557.1
Location 1917-2994,1-80
Protein Name replication-associated protein
Coding Region ATGAAAGTTGTACTAATATATATAATACTCCAATACTCCAATAGATATGTTAATATGCTAAGCCACGTCATCGGAGTACANATGCCTCCTACTAAAAGATTTCGTATTCAAGCAAAAAACATATTTCTTACATATCCTCAGTGTTCTCTTTCAAAAGAAGAAGCTCTTGAGCAAATTCAAAGAATACAACTTTCATCTAATAAAAAATATATTAAAATTGCCAGAGAGCTACACGAAGATGGGCAACCTCATCTCCACGTCCTGCTTCAACTCGAAGGAAAAGTTCAGATCACAAATATCAGATTATTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGAGAGCTAAATCCAGCTCCGACGTCAAGTCCTACGTCGACAAGGACGGAGACACAATTGAATGGGGAGAATTCCAGATCGACGGTAGAAGTGCTAGAGGAGGTCAACAGACAGCTAACGACTCATATGCCAAGGCGTTAAACGCAACTTCTCTTGACCAAGCACTTCAAATATTGAAGGAAGAACAACCAAAGGATTACTTCCTTCAACATCACAATCTTTTGAACAATGCTCAAAAGATATTTCAGAGGCCACCTGATCCATGGACTCCACTATTTCCTCTGTCCTCATTCACAAACGTTCCTGAGGAAATGCAAGAATGGGCTGATGCATATTTCGGGGTTGATGCCGCTGCGCGGCCTTTAAGATATAATAGTATCATAGTAGAGGGTGATTCAAGAACAGGGAAGACTATGTGGGCTAGATCTTTAGGGGCCCACAATTACATCACAGGGCACTTAGATTTTAGCCCTAGAACGTATTATGATGAAGTGGAATACAACGTCATTGATGACGTAGATCCCACTTACTTAAAGATGAAACACTGGAAACACCTTATTGGAGCACAAAAGGAGTGGCAGACAAACTTAAAGTATGGAAAACCACGTGTCATTAAAGGTGGTATCCCCTGCATTATATTATGCAATCCAGGACCTGAGAGCTCATACCAACAATTTCTTGAAAAACCAGAAAATGAAGCCCTTAAGTCCTGGACATTACATAATTCAACCTTCTGCAAACTCCAAGGTCCGCTCTTTAATAACCAAGCAGCAGCATCCTCGCAAGGTGACTCTACCCTGTAA
Protein Sequence MKVVLIYIILQYSNRYVNMLSHVIGVXMPPTKRFRIQAKNIFLTYPQCSLSKEEALEQIQRIQLSSNKKYIKIARELHEDGQPHLHVLLQLEGKVQITNIRLFDLVSPTRSAHFHPNIQRAKSSSDVKSYVDKDGDTIEWGEFQIDGRSARGGQQTANDSYAKALNATSLDQALQILKEEQPKDYFLQHHNLLNNAQKIFQRPPDPWTPLFPLSSFTNVPEEMQEWADAYFGVDAAARPLRYNSIIVEGDSRTGKTMWARSLGAHNYITGHLDFSPRTYYDEVEYNVIDDVDPTYLKMKHWKHLIGAQKEWQTNLKYGKPRVIKGGIPCIILCNPGPESSYQQFLEKPENEALKSWTLHNSTFCKLQGPLFNNQAAASSQGDSTL

NCBI Accession NP_899663.1
Location 401-667
Protein Name movement protein
Coding Region ATGATGGTCTGTCTACCAGACTGGTTATTTTTGCTATTTATCTTCAGTATTCTACTGCAATCAGGTACGAACTTTTATGGGACCTTTCAGAGTGGATCAATTTCCAGACAATTATCCAGCCTTTCTAGCAGTATCGACCAGTTGTTTCTTAAGGTACAACAGGTGGTGTATACTAGGTATCCATCAAGAGATAGGGTCTCTGACCCTAGAAGAAGGCGAGGTCTTTCGTCAATTCCAGAAGGAAGTGAAGAAGCTACTGAGGTGTAA
Protein Sequence MMVCLPDWLFLLFIFSILLQSGTNFYGTFQSGSISRQLSSLSSSIDQLFLKVQQVVYTRYPSRDRVSDPRRRRGLSSIPEGSEEATEV

NCBI Accession NP_040558.1
Location 477-785
Protein Name hypothetical protein
Coding Region ATGGGACCTTTCAGAGTGGATCAATTTCCAGACAATTATCCAGCCTTTCTAGCAGTATCGACCAGTTGTTTCTTAAGGTACAACAGGTGGTGTATACTAGGTATCCATCAAGAGATAGGGTCTCTGACCCTAGAAGAAGGCGAGGTCTTTCGTCAATTCCAGAAGGAAGTGAAGAAGCTACTGAGGTGTAAGGTTAATTTTCATAGGAAGTGTTCGTTGTATGAGGAAATATACAAGAAATACGTATACAATGTCCCAGAAAAGAAAGGTGAATCCTCAAAGTGCGTGGCCGAAGAAGAGGAGGACTAG
Protein Sequence MGPFRVDQFPDNYPAFLAVSTSCFLRYNRWCILGIHQEIGSLTLEEGEVFRQFQKEVKKLLRCKVNFHRKCSLYEEIYKKYVYNVPEKKGESSKCVAEEEED

NCBI Accession NP_040559.1
Location 697-1461
Protein Name coat protein
Coding Region ATGAGGAAATATACAAGAAATACGTATACAATGTCCCAGAAAAGAAAGGTGAATCCTCAAAGTGCGTGGCCGAAGAAGAGGAGGACTAGTACGACTTCGAGGAAATACCAATGGAGGAGACCTGTGACAAAAAACAGGACTCTGAAGTTAAAGATGTATGATGATATGTTGGGTGCTGGTGGTATAGGATCTACCATTAGTAATAATGGTATGATTACTATGTTGAATAATTATGTCCAGGGTATTGGTGATAGTCAGAGAGCGAAGAACGTTACTGTGACGAAGCATTTGAAGTTTGATATGGCTCTTATGGGGAGTTCTCAGTTCTGGGAGACTCCTAATTATATGACCCAATATCATTGGATTATCATAGACAAGGATGTTGGGTCAGTGTTTCCTACTAAGTTATCGAGTATATTTGATATTCCCGATAACGGTCAGGCTATGCCGTCTACTTATCGTATTCGAAGAGATATGAACGAGAGGTTTATTGGGAAGAAGAAATGGAGAACTCATTGGATGTCTACTGGTACTGGATATGGAGGGAAGGAGACTTACAAGGCTCCTTCAATGCCAAATTACAAGAAACCGATGAATATCAATGTGCGCAATTTGAACATGAGGACTATTTGGAAAGACACCGGTGGTGGGAAGTATGAAGACGTGAAGGAGAATGCTTTACTCTATGTTGTTGTTAATGATAATACGGATAATACTAATATGTATGCCACATTATTTGGCAATTGTAGATGCTATTTTTATTAA
Protein Sequence MRKYTRNTYTMSQKRKVNPQSAWPKKRRTSTTSRKYQWRRPVTKNRTLKLKMYDDMLGAGGIGSTISNNGMITMLNNYVQGIGDSQRAKNVTVTKHLKFDMALMGSSQFWETPNYMTQYHWIIIDKDVGSVFPTKLSSIFDIPDNGQAMPSTYRIRRDMNERFIGKKKWRTHWMSTGTGYGGKETYKAPSMPNYKKPMNINVRNLNMRTIWKDTGGGKYEDVKENALLYVVVNDNTDNTNMYATLFGNCRCYFY

NCBI Accession NP_040560.1
Location 1486-1896
Protein Name replication enhancer protein
Coding Region ATGAATGTAATAGAGGATTTTCGCACAGGGGAACCTATTACTCTCCATCAGGCAACAAATTCCGTCGAATTCGAGAATGTACCGAATCCACTGTATATGAAACTCCTATGGTTCGAGAGATACGGGCCAATCTATCAACTGAAGATACAAATCAGATTCAACTACAACCTCCGGAGAGCGTTGAATCTTCACAAGTGCTGGATAGAGCTGACGATAACTGGATCGAACAGGATATTGACTGGACCCCGTTTCTTGAAGGTCTTGAAAAAGAGACTAGAGATATACTTGGATAATCTAGGTTTAATTTGTATTAATAATGTAATTAGAGGTTTAAATCATGTCCTGTATGAAGAATTTACTTTTGTATCAAGTGTAATTCAGAACCAGAGTGTTGCAATGAACTTGTACTAA
Protein Sequence MNVIEDFRTGEPITLHQATNSVEFENVPNPLYMKLLWFERYGPIYQLKIQIRFNYNLRRALNLHKCWIELTITGSNRILTGPRFLKVLKKRLEIYLDNLGLICINNVIRGLNHVLYEEFTFVSSVIQNQSVAMNLY

NCBI Accession NP_040561.1
Location 1604-2125
Protein Name pathogenicity determinant protein
Coding Region ATGGAAAACCACGTGTCATTAAAGGTGGTATCCCCTGCATTATATTATGCAATCCAGGACCTGAGAGCTCATACCAACAATTTCTTGAAAAACCAGAAAATGAAGCCCTTAAGTCCTGGACATTACATAATTCAACCTTCTGCAAACTCCAAGGTCCGCTCTTTAATAACCAAGCAGCAGCATCCTCGCAAGGTGACTCTACCCTGTAACTGCCACTTCACAATACACCATGAATGTAATAGAGGATTTTCGCACAGGGGAACCTATTACTCTCCATCAGGCAACAAATTCCGTCGAATTCGAGAATGTACCGAATCCACTGTATATGAAACTCCTATGGTTCGAGAGATACGGGCCAATCTATCAACTGAAGATACAAATCAGATTCAACTACAACCTCCGGAGAGCGTTGAATCTTCACAAGTGCTGGATAGAGCTGACGATAACTGGATCGAACAGGATATTGACTGGACCCCGTTTCTTGAAGGTCTTGAAAAAGAGACTAGAGATATACTTGGATAA
Protein Sequence MENHVSLKVVSPALYYAIQDLRAHTNNFLKNQKMKPLSPGHYIIQPSANSKVRSLITKQQHPRKVTLPCNCHFTIHHECNRGFSHRGTYYSPSGNKFRRIRECTESTVYETPMVREIRANLSTEDTNQIQLQPPESVESSQVLDRADDNWIEQDIDWTPFLEGLEKETRDILG

References More References in PubMed

1

Beet curly top virus affects vector biology: the first transcriptome analysis of the beet leafhopper.

Han J, et al.  J Gen Virol. 2024 Jul;105(7):002012. doi: 10.1099/jgv.0.002012.

PMID: 39073409
2

Beet Curly Top Iran Virus Rep and V2 Suppress Post-Transcriptional Gene Silencing via Distinct Modes of Action.

Ebrahimi S, et al.  Viruses. 2023 Sep 26;15(10):1996. doi: 10.3390/v15101996.

PMID: 37896771
3

Immunolocalization of Beet Curly Top Virus (BCTV) and GroEL Chaperon Protein of Endosymbionts in Beet Leafhopper (Circulifer tenellus) Vector Tissue.

Alkhatib BM, et al.  Viruses. 2024 Oct 5;16(10):1571. doi: 10.3390/v16101571.

PMID: 39459905
4

Regulatory Roles of Small Non-coding RNAs in Sugar Beet Resistance Against Beet curly top virus.

Majumdar R, et al.  Front Plant Sci. 2022 Jan 10;12:780877. doi: 10.3389/fpls.2021.780877. eCollection 2021.

PMID: 35082811
5

Beet curly top virus Strains Associated with Sugar Beet in Idaho, Oregon, and a Western U.S. Collection.

Strausbaugh CA, et al.  Plant Dis. 2017 Aug;101(8):1373-1382. doi: 10.1094/PDIS-03-17-0381-RE. Epub 2017 May 25.

PMID: 30678603
6

Pest categorisation of Beet curly top virus (non-EU isolates).

EFSA Panel on Plant Health (PLH), et al.  EFSA J. 2017 Oct 11;15(10):e04998. doi: 10.2903/j.efsa.2017.4998. eCollection 2017 Oct.

PMID: 32625295
7

Complementary-sense gene regulation in beet curly top virus-SpCT.

Guerrero J, et al.  Arch Virol. 2019 Nov;164(11):2823-2828. doi: 10.1007/s00705-019-04385-9. Epub 2019 Sep 4.

PMID: 31485748
8

Curly Top Disease of Hemp (Cannabis sativa) in California Is Caused by Mild-Type Strains of Beet curly top virus Often in Mixed Infection.

Melgarejo TA, et al.  Plant Dis. 2022 Dec;106(12):3022-3026. doi: 10.1094/PDIS-04-22-0856-SC. Epub 2022 Nov 17.

PMID: 35549320
9

Transcriptomic profiling reveals distinct responses to beet curly top virus (BCTV) infection in resistant and susceptible sugar beet genotypes.

Withycombe J, et al.  BMC Genomics. 2024 Dec 23;25(1):1237. doi: 10.1186/s12864-024-11143-y.

PMID: 39716086
10

Unusual outbreaks of curly top disease in processing tomato fields in northern California in 2021 and 2022 were caused by a rare strain of beet curly top virus and facilitated by extreme weather events.

Melgarejo TA, et al.  Virology. 2024 Mar;591:109981. doi: 10.1016/j.virol.2024.109981. Epub 2024 Jan 4.

PMID: 38211381