Beet curly top virus
Basic Information
| Genus |
Curtovirus
|
| NCBI Assembly |
GCF_000843505.1 |
| Release date |
2018/11/26 |
| Submitter |
Stanley,J., Markham,P.G., Callis,R.J., Pinner,M.S. |
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TGTACTCCGATGACGTGGCTTAGCATATTAACATATCTATTGGAGTATTGGAGTATTATATATATTAGTACAACTTTCATAAGGGCCATCCGTTATAATATTACCGGATGGCCCGAAAAAAATGGGCACCCAATCAAAACGTGACACGTGGAAGGGGACTGTTGAATGATGTGACGTTTTTGAGCGGGAAACTTCCTGAAGAAGATTCCTGCGGGAAACTTCCTGAAGAAGATTCCTTTCAGATAAGATTTGTTGACTGGTCAAAAGAAGGGGACAACTTTATTAAAGTAACTTTACTTTAGTAAAAGTAAAGTAAGTGTGCCCCACAGGAAACTTGCTCAGCAAGTTTTGAATTATGTCGTTTTATATACGTTATTTTTACATGTATATGTAATTATAAATGATGGTCTGTCTACCAGACTGGTTATTTTTGCTATTTATCTTCAGTATTCTACTGCAATCAGGTACGAACTTTTATGGGACCTTTCAGAGTGGATCAATTTCCAGACAATTATCCAGCCTTTCTAGCAGTATCGACCAGTTGTTTCTTAAGGTACAACAGGTGGTGTATACTAGGTATCCATCAAGAGATAGGGTCTCTGACCCTAGAAGAAGGCGAGGTCTTTCGTCAATTCCAGAAGGAAGTGAAGAAGCTACTGAGGTGTAAGGTTAATTTTCATAGGAAGTGTTCGTTGTATGAGGAAATATACAAGAAATACGTATACAATGTCCCAGAAAAGAAAGGTGAATCCTCAAAGTGCGTGGCCGAAGAAGAGGAGGACTAGTACGACTTCGAGGAAATACCAATGGAGGAGACCTGTGACAAAAAACAGGACTCTGAAGTTAAAGATGTATGATGATATGTTGGGTGCTGGTGGTATAGGATCTACCATTAGTAATAATGGTATGATTACTATGTTGAATAATTATGTCCAGGGTATTGGTGATAGTCAGAGAGCGAAGAACGTTACTGTGACGAAGCATTTGAAGTTTGATATGGCTCTTATGGGGAGTTCTCAGTTCTGGGAGACTCCTAATTATATGACCCAATATCATTGGATTATCATAGACAAGGATGTTGGGTCAGTGTTTCCTACTAAGTTATCGAGTATATTTGATATTCCCGATAACGGTCAGGCTATGCCGTCTACTTATCGTATTCGAAGAGATATGAACGAGAGGTTTATTGGGAAGAAGAAATGGAGAACTCATTGGATGTCTACTGGTACTGGATATGGAGGGAAGGAGACTTACAAGGCTCCTTCAATGCCAAATTACAAGAAACCGATGAATATCAATGTGCGCAATTTGAACATGAGGACTATTTGGAAAGACACCGGTGGTGGGAAGTATGAAGACGTGAAGGAGAATGCTTTACTCTATGTTGTTGTTAATGATAATACGGATAATACTAATATGTATGCCACATTATTTGGCAATTGTAGATGCTATTTTTATTAATAATATTTATTATTAATAATGAAATTAGTACAAGTTCATTGCAACACTCTGGTTCTGAATTACACTTGATACAAAAGTAAATTCTTCATACAGGACATGATTTAAACCTCTAATTACATTATTAATACAAATTAAACCTAGATTATCCAAGTATATCTCTAGTCTCTTTTTCAAGACCTTCAAGAAACGGGGTCCAGTCAATATCCTGTTCGATCCAGTTATCGTCAGCTCTATCCAGCACTTGTGAAGATTCAACGCTCTCCGGAGGTTGTAGTTGAATCTGATTTGTATCTTCAGTTGATAGATTGGCCCGTATCTCTCGAACCATAGGAGTTTCATATACAGTGGATTCGGTACATTCTCGAATTCGACGGAATTTGTTGCCTGATGGAGAGTAATAGGTTCCCCTGTGCGAAAATCCTCTATTACATTCATGGTGTATTGTGAAGTGGCAGTTACAGGGTAGAGTCACCTTGCGAGGATGCTGCTGCTTGGTTATTAAAGAGCGGACCTTGGAGTTTGCAGAAGGTTGAATTATGTAATGTCCAGGACTTAAGGGCTTCATTTTCTGGTTTTTCAAGAAATTGTTGGTATGAGCTCTCAGGTCCTGGATTGCATAATATAATGCAGGGGATACCACCTTTAATGACACGTGGTTTTCCATACTTTAAGTTTGTCTGCCACTCCTTTTGTGCTCCAATAAGGTGTTTCCAGTGTTTCATCTTTAAGTAAGTGGGATCTACGTCATCAATGACGTTGTATTCCACTTCATCATAATACGTTCTAGGGCTAAAATCTAAGTGCCCTGTGATGTAATTGTGGGCCCCTAAAGATCTAGCCCACATAGTCTTCCCTGTTCTTGAATCACCCTCTACTATGATACTATTATATCTTAAAGGCCGCGCAGCGGCATCAACCCCGAAATATGCATCAGCCCATTCTTGCATTTCCTCAGGAACGTTTGTGAATGAGGACAGAGGAAATAGTGGAGTCCATGGATCAGGTGGCCTCTGAAATATCTTTTGAGCATTGTTCAAAAGATTGTGATGTTGAAGGAAGTAATCCTTTGGTTGTTCTTCCTTCAATATTTGAAGTGCTTGGTCAAGAGAAGTTGCGTTTAACGCCTTGGCATATGAGTCGTTAGCTGTCTGTTGACCTCCTCTAGCACTTCTACCGTCGATCTGGAATTCTCCCCATTCAATTGTGTCTCCGTCCTTGTCGACGTAGGACTTGACGTCGGAGCTGGATTTAGCTCTCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAATAATCTGATATTTGTGATCTGAACTTTTCCTTCGAGTTGAAGCAGGACGTGGAGATGAGGTTGCCCATCTTCGTGTAGCTCTCTGGCAATTTTAATATATTTTTTATTAGATGAAAGTTGTATTCTTTGAATTTGCTCAAGAGCTTCTTCTTTTGAAAGAGAACACTGAGGATATGTAAGAAATATGTTTTTTGCTTGAATACGAAATCTTTTAGTAGGAGGCATN
Gene Information
|
NCBI Accession
|
NP_040557.1
|
|
Location
|
1917-2994,1-80 |
|
Protein Name
|
replication-associated protein |
|
Coding Region
|
ATGAAAGTTGTACTAATATATATAATACTCCAATACTCCAATAGATATGTTAATATGCTAAGCCACGTCATCGGAGTACANATGCCTCCTACTAAAAGATTTCGTATTCAAGCAAAAAACATATTTCTTACATATCCTCAGTGTTCTCTTTCAAAAGAAGAAGCTCTTGAGCAAATTCAAAGAATACAACTTTCATCTAATAAAAAATATATTAAAATTGCCAGAGAGCTACACGAAGATGGGCAACCTCATCTCCACGTCCTGCTTCAACTCGAAGGAAAAGTTCAGATCACAAATATCAGATTATTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGAGAGCTAAATCCAGCTCCGACGTCAAGTCCTACGTCGACAAGGACGGAGACACAATTGAATGGGGAGAATTCCAGATCGACGGTAGAAGTGCTAGAGGAGGTCAACAGACAGCTAACGACTCATATGCCAAGGCGTTAAACGCAACTTCTCTTGACCAAGCACTTCAAATATTGAAGGAAGAACAACCAAAGGATTACTTCCTTCAACATCACAATCTTTTGAACAATGCTCAAAAGATATTTCAGAGGCCACCTGATCCATGGACTCCACTATTTCCTCTGTCCTCATTCACAAACGTTCCTGAGGAAATGCAAGAATGGGCTGATGCATATTTCGGGGTTGATGCCGCTGCGCGGCCTTTAAGATATAATAGTATCATAGTAGAGGGTGATTCAAGAACAGGGAAGACTATGTGGGCTAGATCTTTAGGGGCCCACAATTACATCACAGGGCACTTAGATTTTAGCCCTAGAACGTATTATGATGAAGTGGAATACAACGTCATTGATGACGTAGATCCCACTTACTTAAAGATGAAACACTGGAAACACCTTATTGGAGCACAAAAGGAGTGGCAGACAAACTTAAAGTATGGAAAACCACGTGTCATTAAAGGTGGTATCCCCTGCATTATATTATGCAATCCAGGACCTGAGAGCTCATACCAACAATTTCTTGAAAAACCAGAAAATGAAGCCCTTAAGTCCTGGACATTACATAATTCAACCTTCTGCAAACTCCAAGGTCCGCTCTTTAATAACCAAGCAGCAGCATCCTCGCAAGGTGACTCTACCCTGTAA |
|
Protein Sequence
|
MKVVLIYIILQYSNRYVNMLSHVIGVXMPPTKRFRIQAKNIFLTYPQCSLSKEEALEQIQRIQLSSNKKYIKIARELHEDGQPHLHVLLQLEGKVQITNIRLFDLVSPTRSAHFHPNIQRAKSSSDVKSYVDKDGDTIEWGEFQIDGRSARGGQQTANDSYAKALNATSLDQALQILKEEQPKDYFLQHHNLLNNAQKIFQRPPDPWTPLFPLSSFTNVPEEMQEWADAYFGVDAAARPLRYNSIIVEGDSRTGKTMWARSLGAHNYITGHLDFSPRTYYDEVEYNVIDDVDPTYLKMKHWKHLIGAQKEWQTNLKYGKPRVIKGGIPCIILCNPGPESSYQQFLEKPENEALKSWTLHNSTFCKLQGPLFNNQAAASSQGDSTL |
|
NCBI Accession
|
NP_899663.1
|
|
Location
|
401-667 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGATGGTCTGTCTACCAGACTGGTTATTTTTGCTATTTATCTTCAGTATTCTACTGCAATCAGGTACGAACTTTTATGGGACCTTTCAGAGTGGATCAATTTCCAGACAATTATCCAGCCTTTCTAGCAGTATCGACCAGTTGTTTCTTAAGGTACAACAGGTGGTGTATACTAGGTATCCATCAAGAGATAGGGTCTCTGACCCTAGAAGAAGGCGAGGTCTTTCGTCAATTCCAGAAGGAAGTGAAGAAGCTACTGAGGTGTAA |
|
Protein Sequence
|
MMVCLPDWLFLLFIFSILLQSGTNFYGTFQSGSISRQLSSLSSSIDQLFLKVQQVVYTRYPSRDRVSDPRRRRGLSSIPEGSEEATEV |
|
NCBI Accession
|
NP_040558.1
|
|
Location
|
477-785 |
|
Protein Name
|
hypothetical protein |
|
Coding Region
|
ATGGGACCTTTCAGAGTGGATCAATTTCCAGACAATTATCCAGCCTTTCTAGCAGTATCGACCAGTTGTTTCTTAAGGTACAACAGGTGGTGTATACTAGGTATCCATCAAGAGATAGGGTCTCTGACCCTAGAAGAAGGCGAGGTCTTTCGTCAATTCCAGAAGGAAGTGAAGAAGCTACTGAGGTGTAAGGTTAATTTTCATAGGAAGTGTTCGTTGTATGAGGAAATATACAAGAAATACGTATACAATGTCCCAGAAAAGAAAGGTGAATCCTCAAAGTGCGTGGCCGAAGAAGAGGAGGACTAG |
|
Protein Sequence
|
MGPFRVDQFPDNYPAFLAVSTSCFLRYNRWCILGIHQEIGSLTLEEGEVFRQFQKEVKKLLRCKVNFHRKCSLYEEIYKKYVYNVPEKKGESSKCVAEEEED |
|
NCBI Accession
|
NP_040559.1
|
|
Location
|
697-1461 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGAGGAAATATACAAGAAATACGTATACAATGTCCCAGAAAAGAAAGGTGAATCCTCAAAGTGCGTGGCCGAAGAAGAGGAGGACTAGTACGACTTCGAGGAAATACCAATGGAGGAGACCTGTGACAAAAAACAGGACTCTGAAGTTAAAGATGTATGATGATATGTTGGGTGCTGGTGGTATAGGATCTACCATTAGTAATAATGGTATGATTACTATGTTGAATAATTATGTCCAGGGTATTGGTGATAGTCAGAGAGCGAAGAACGTTACTGTGACGAAGCATTTGAAGTTTGATATGGCTCTTATGGGGAGTTCTCAGTTCTGGGAGACTCCTAATTATATGACCCAATATCATTGGATTATCATAGACAAGGATGTTGGGTCAGTGTTTCCTACTAAGTTATCGAGTATATTTGATATTCCCGATAACGGTCAGGCTATGCCGTCTACTTATCGTATTCGAAGAGATATGAACGAGAGGTTTATTGGGAAGAAGAAATGGAGAACTCATTGGATGTCTACTGGTACTGGATATGGAGGGAAGGAGACTTACAAGGCTCCTTCAATGCCAAATTACAAGAAACCGATGAATATCAATGTGCGCAATTTGAACATGAGGACTATTTGGAAAGACACCGGTGGTGGGAAGTATGAAGACGTGAAGGAGAATGCTTTACTCTATGTTGTTGTTAATGATAATACGGATAATACTAATATGTATGCCACATTATTTGGCAATTGTAGATGCTATTTTTATTAA |
|
Protein Sequence
|
MRKYTRNTYTMSQKRKVNPQSAWPKKRRTSTTSRKYQWRRPVTKNRTLKLKMYDDMLGAGGIGSTISNNGMITMLNNYVQGIGDSQRAKNVTVTKHLKFDMALMGSSQFWETPNYMTQYHWIIIDKDVGSVFPTKLSSIFDIPDNGQAMPSTYRIRRDMNERFIGKKKWRTHWMSTGTGYGGKETYKAPSMPNYKKPMNINVRNLNMRTIWKDTGGGKYEDVKENALLYVVVNDNTDNTNMYATLFGNCRCYFY |
|
NCBI Accession
|
NP_040560.1
|
|
Location
|
1486-1896 |
|
Protein Name
|
replication enhancer protein |
|
Coding Region
|
ATGAATGTAATAGAGGATTTTCGCACAGGGGAACCTATTACTCTCCATCAGGCAACAAATTCCGTCGAATTCGAGAATGTACCGAATCCACTGTATATGAAACTCCTATGGTTCGAGAGATACGGGCCAATCTATCAACTGAAGATACAAATCAGATTCAACTACAACCTCCGGAGAGCGTTGAATCTTCACAAGTGCTGGATAGAGCTGACGATAACTGGATCGAACAGGATATTGACTGGACCCCGTTTCTTGAAGGTCTTGAAAAAGAGACTAGAGATATACTTGGATAATCTAGGTTTAATTTGTATTAATAATGTAATTAGAGGTTTAAATCATGTCCTGTATGAAGAATTTACTTTTGTATCAAGTGTAATTCAGAACCAGAGTGTTGCAATGAACTTGTACTAA |
|
Protein Sequence
|
MNVIEDFRTGEPITLHQATNSVEFENVPNPLYMKLLWFERYGPIYQLKIQIRFNYNLRRALNLHKCWIELTITGSNRILTGPRFLKVLKKRLEIYLDNLGLICINNVIRGLNHVLYEEFTFVSSVIQNQSVAMNLY |
|
NCBI Accession
|
NP_040561.1
|
|
Location
|
1604-2125 |
|
Protein Name
|
pathogenicity determinant protein |
|
Coding Region
|
ATGGAAAACCACGTGTCATTAAAGGTGGTATCCCCTGCATTATATTATGCAATCCAGGACCTGAGAGCTCATACCAACAATTTCTTGAAAAACCAGAAAATGAAGCCCTTAAGTCCTGGACATTACATAATTCAACCTTCTGCAAACTCCAAGGTCCGCTCTTTAATAACCAAGCAGCAGCATCCTCGCAAGGTGACTCTACCCTGTAACTGCCACTTCACAATACACCATGAATGTAATAGAGGATTTTCGCACAGGGGAACCTATTACTCTCCATCAGGCAACAAATTCCGTCGAATTCGAGAATGTACCGAATCCACTGTATATGAAACTCCTATGGTTCGAGAGATACGGGCCAATCTATCAACTGAAGATACAAATCAGATTCAACTACAACCTCCGGAGAGCGTTGAATCTTCACAAGTGCTGGATAGAGCTGACGATAACTGGATCGAACAGGATATTGACTGGACCCCGTTTCTTGAAGGTCTTGAAAAAGAGACTAGAGATATACTTGGATAA |
|
Protein Sequence
|
MENHVSLKVVSPALYYAIQDLRAHTNNFLKNQKMKPLSPGHYIIQPSANSKVRSLITKQQHPRKVTLPCNCHFTIHHECNRGFSHRGTYYSPSGNKFRRIRECTESTVYETPMVREIRANLSTEDTNQIQLQPPESVESSQVLDRADDNWIEQDIDWTPFLEGLEKETRDILG |