Genus | Citlodavirus |
---|---|
NCBI Assembly | GCF_000898955.1 |
Isolate | Turkey |
Release date | 2015/2/22 |
Submitter | Loconsole,G., Saldarelli,P., Doddapaneni,H., Savino,V., Martelli,G.P., Saponari,M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_006522418.1 |
---|---|
Location | 194-613 |
Protein Name | putative V2-like protein |
Coding Region | ATGTGTCATTATGCATTAAGTGTTCAAGATTTGCCCGAGAGTTTGTTCGGTTTAATGAGCATGTTGAGTGTGAGGTATTTAAAGTGTGTGGAAGAGAGGGAAATGGAGAGAAGCCTAATGGTAGGGAATCCCGTAGGAGGAGCCCTGGGTAATGCTCGTATACTTATACGGTTAATACGTAGATACTGCAGGTGTAGAGACTGGGTAAGGAAAGGTAGGGTCAATGGTGAGTACCAGGAGTGGAGGACAATATGGGACAAGCCGTGTAACGACTGTGGAGACGCTGCCGATGTGGGCCACAAAGAGAAGAAGGAGGCCCAGGTGGCCGAGAAAGGAAAAGAAGCCCAAGATTGCTGGGGCTGTATTTGTGAAGGCCCGGCCCAGGAGAAAGTCGAGCAAAGGTGTTCCTCCGGGGTGTAA |
Protein Sequence | MCHYALSVQDLPESLFGLMSMLSVRYLKCVEEREMERSLMVGNPVGGALGNARILIRLIRRYCRCRDWVRKGRVNGEYQEWRTIWDKPCNDCGDAADVGHKEKKEAQVAEKGKEAQDCWGCICEGPAQEKVEQRCSSGV |
NCBI Accession | YP_006522419.1 |
---|---|
Location | 417-1181 |
Protein Name | putative coat protein-like protein |
Coding Region | ATGGTGAGTACCAGGAGTGGAGGACAATATGGGACAAGCCGTGTAACGACTGTGGAGACGCTGCCGATGTGGGCCACAAAGAGAAGAAGGAGGCCCAGGTGGCCGAGAAAGGAAAAGAAGCCCAAGATTGCTGGGGCTGTATTTGTGAAGGCCCGGCCCAGGAGAAAGTCGAGCAAAGGTGTTCCTCCGGGGTGTAAGGGCCCATGTAAAACACACACGGTGGATGTGATAAAGACTATTTATCACGATGGCCGTGGATCTGGAATGATTTCAAATATTGACCGAGGTGATGAGCTAGGTCAAAGGGAAGGAAGGAAAATAAGGGTTTCACGTATGATCATACGTGGCAAGATCTGGTTGGACGTGAATAATGCATCCGTACCAGGAAGCAATTTAGCTAAAATATGGATTTTCAAGGATAGGAGACCGGGGACTGAACCGGTTGCTTTTAATGCGCTGATGGATATGTCTGATTCAGAACCACTCAGTGCATTTGTGAAGGTTGACTACAGGGACAGGTTTATTGCCCTTCACACTATGACGGTAGACCTGCACGGTGGAAAGGATTTTAGGGTTGACGAGCTTGACTTGGATGAGTTAGTTGAGATAAACAGTGATGTTTTGTTTAGTCATGAGGACGATGGGTCTGTGGCCCATACGATCCAAAATGGTATTTTTATATATTATGCTTGTAGTGATCCTAGACAGACTGTGCAAATAACTGCACAGGCTCGATTGTATTTTTATGATTCTACATCAAATTAA |
Protein Sequence | MVSTRSGGQYGTSRVTTVETLPMWATKRRRRPRWPRKEKKPKIAGAVFVKARPRRKSSKGVPPGCKGPCKTHTVDVIKTIYHDGRGSGMISNIDRGDELGQREGRKIRVSRMIIRGKIWLDVNNASVPGSNLAKIWIFKDRRPGTEPVAFNALMDMSDSEPLSAFVKVDYRDRFIALHTMTVDLHGGKDFRVDELDLDELVEINSDVLFSHEDDGSVAHTIQNGIFIYYACSDPRQTVQITAQARLYFYDSTSN |
NCBI Accession | YP_006522420.1 |
---|---|
Location | 1211-2131 |
Protein Name | putative BL1-like movement protein |
Coding Region | ATGGACGGTCAAGATTTGGTGTTACAAGACTATCATAGCACGAGACGTATTGAATACCCTCTAAGTGATGAGTGGCAGCAGATAAAGCTTGCATTCCCTAGTATGAAGGAGATTAGCTGGCATAAGTTACGTGGTCAATGCATGAAAATTGACCATTGTCAGATACGGTATGATCCGCAAGTACCTGCTAATGCAGAAGGGAATGTATTGGTTGTGGTACACGATAGACGTATGGAAGCTGACAAGTCAATGCAAGCTGAATATACTTTTCCAATACGATGTGGAATAGAACTTAATTACTATTCCTGTTCGTATTTTTCGTTGAAGGACCCAGTACCATGGTGTGTATACTATAGGGTTGTGAACTCTACTGTGTTGAAGGGTTCTCATTTTTGTCAATTTAAGGCGCGCGTGAAGCTAAGCGCGGCTAAATCAAGTAGCCCAATTGGGTTCAGGGGTCCAAGTGTTAAGATTTTAAACAAGGCATTCAACGAAGACCAGGTGGATTTCATGCACGTGGGCATCCCGAAGTCAGAAAGGGTGTTATGCAGGAGTAATAGTGTTTTAACGACCCGGCCCAGATTGAATCTTGAGGCTGGGGAGAGTTGGGCCTCGAAAAGTATATTATCAGGCGAAGGTGGATCGGAGGTTGGTGATTCCGGCCCATATAGGGGTTTGGCTCAGTTAGGCCCAGACGCGATTGATCCAGGTGATAGCGCGTCTAATTTGGGTGATCCAAAATCAGTTGCGGATGAAGTCATTAGAAGACTTAACAGTTCAGTTATTGGGATGGACTTAAACAGTTCAAAATTTGCAGAGATAATTGGAGATGCAGTACTCAAGGGAAGTGTGATCAACAGTAGAGATAATCAGGCCTCAACAAGTAATGCTAATGATTATAAGAAAAAAAGCTTGGCTTAA |
Protein Sequence | MDGQDLVLQDYHSTRRIEYPLSDEWQQIKLAFPSMKEISWHKLRGQCMKIDHCQIRYDPQVPANAEGNVLVVVHDRRMEADKSMQAEYTFPIRCGIELNYYSCSYFSLKDPVPWCVYYRVVNSTVLKGSHFCQFKARVKLSAAKSSSPIGFRGPSVKILNKAFNEDQVDFMHVGIPKSERVLCRSNSVLTTRPRLNLEAGESWASKSILSGEGGSEVGDSGPYRGLAQLGPDAIDPGDSASNLGDPKSVADEVIRRLNSSVIGMDLNSSKFAEIIGDAVLKGSVINSRDNQASTSNANDYKKKSLA |
NCBI Accession | YP_006522421.1 |
---|---|
Location | 2300->2707 |
Protein Name | putative C1:C2-like protein |
Coding Region | CGAGCACAGGAACCAGACTCCAAGCCCGACAGGCCCAAATCCCTCTACATCTGCGGCCCAAGCCGATCAGGCAAAACCGCCTGGGCCAGAAGTTTAGGCCTACACAACTACTTCACGGGTGCCATCAAATTCCACGACTACAACGACCACGCACTGTATAACGTCATTGATGACATCCAATACACCAAAATCTCACATGAGGTTATGAAATCCTTAGTGGGGTCCCAAAAAAACATTACCGTTAACATTAAGTATAGACCCGATCGCACTATTAAGGGAGGCATACCGTCCATAATATGTGTTAATCCAGATATGGACTGGTTAACTTATATGTCACCCACAATAAAGGACTGGTGGAACCAAAATGTACTTATGCATTATATGGACCCCACTGATGTATTCTACTAG |
Protein Sequence | RAQEPDSKPDRPKSLYICGPSRSGKTAWARSLGLHNYFTGAIKFHDYNDHALYNVIDDIQYTKISHEVMKSLVGSQKNITVNIKYRPDRTIKGGIPSIICVNPDMDWLTYMSPTIKDWWNQNVLMHYMDPTDVFY |
NCBI Accession | YP_006522422.1 |
---|---|
Location | 2611-3420 |
Protein Name | putative RepA-like protein |
Coding Region | ATGGCTTCCACTTCCTCTAGCTTCCGATTCTCAGCCAAAAATATTTTCCTTACATACCCCAAGTGCCCATGCACCAAGGAACACCTCCAAGCTTTCCTTCGACTAACACTCGCACGATTCACAATCACTTACATGTGCGTGTGTGAGGAACTCCACGAATCCGGAGACCCACACCTTCATGCCATGATCCAGTGCAAGAAACGGGTCGAAACACAGAACCCCCGGTTCTTCGACCTCCTCTCCGTACGCAGAGAGAGGTCATTCCATCCCTGTATCGAGTCCTTGAAATCACCAGCCGCCTCCAGAAAATACCTCATGAAGGACGGCAACTATGTGGAGGAAGGACGCTTCAACTCCAGAGCACGATCCCCACAAAAGGATCAAGAAAAACTGTGGAGGGACGTGCTCCTCGAGGCAACCGACGAACGGTCCTTCCTTAACCTAGTCAGAGAGCTCAGACCATCAGACTTCGTCCTCAGATGGCCAGCGATCTCAGCGTTCGCACGTGACAACTACTGCAGACTACGTGAACCGTTCATACCTGCTTTCACAGAATTCCCGAACCTTCCTGAACACGTCAAGCAGTGGGCCCAGCAGAACATCCTATGTGTAAGTAAACCATTTTTACAGTATGAACTGTGTTATTCCTGCTGTCCAAAAGCAATATTTGAGACTGAGTGCCCAATTAATTTGCAACATCACTTCTGGTGTGACGAGCACAGGAACCAGACTCCAAGCCCGACAGGCCCAAATCCCTCTACATCTGCGGCCCAAGCCGATCAGGCAAAACCGCCTGGGCCAGAAGTTTAG |
Protein Sequence | MASTSSSFRFSAKNIFLTYPKCPCTKEHLQAFLRLTLARFTITYMCVCEELHESGDPHLHAMIQCKKRVETQNPRFFDLLSVRRERSFHPCIESLKSPAASRKYLMKDGNYVEEGRFNSRARSPQKDQEKLWRDVLLEATDERSFLNLVRELRPSDFVLRWPAISAFARDNYCRLREPFIPAFTEFPNLPEHVKQWAQQNILCVSKPFLQYELCYSCCPKAIFETECPINLQHHFWCDEHRNQTPSPTGPNPSTSAAQADQAKPPGPEV |
1 |
Qin Y, et al. Front Plant Sci. 2023 Apr 25;14:1164416. doi: 10.3389/fpls.2023.1164416. eCollection 2023. PMID: 37180388 |
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2 |
Loconsole G, et al. Virology. 2012 Oct 10;432(1):162-72. doi: 10.1016/j.virol.2012.06.005. Epub 2012 Jul 1. PMID: 22749878 |
3 |
Discovery of a novel geminivirus associated with camellia chlorotic dwarf disease. Zhang S, et al. Arch Virol. 2018 Jun;163(6):1709-1712. doi: 10.1007/s00705-018-3780-3. Epub 2018 Mar 2. PMID: 29500570 |
4 |
Geminiviruses: Taxonomic Structure and Diversity in Genomic Organization. Kulshrestha S, et al. Recent Pat Biotechnol. 2020;14(2):86-98. doi: 10.2174/1872208313666191203100851. PMID: 31793424 |
5 |
Updating the Quarantine Status of Prunus Infecting Viruses in Australia. Kinoti WM, et al. Viruses. 2020 Feb 23;12(2):246. doi: 10.3390/v12020246. PMID: 32102210 |
6 |
Fontenele RS, et al. Viruses. 2018 Apr 2;10(4):169. doi: 10.3390/v10040169. PMID: 29614801 |
7 |
Capulavirus and Grablovirus: two new genera in the family Geminiviridae. Varsani A, et al. Arch Virol. 2017 Jun;162(6):1819-1831. doi: 10.1007/s00705-017-3268-6. Epub 2017 Feb 17. PMID: 28213872 |
8 |
Ma Y, et al. J Gen Virol. 2015 Aug;96(8):2421-2434. doi: 10.1099/vir.0.000175. Epub 2015 May 6. PMID: 25953916 |
9 |
Qiu Y, et al. Plant Dis. 2020 Nov;104(11):3010-3018. doi: 10.1094/PDIS-12-19-2597-RE. Epub 2020 Sep 3. PMID: 32881645 |
10 |
Gao L, et al. Arch Virol. 2023 Apr 15;168(5):139. doi: 10.1007/s00705-023-05762-1. PMID: 37059886 |