Wissadula yellow mosaic virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_001777245.1
Isolate Brazil
Release date 2016/10/19
Submitter Passos,L.S., Teixeira,J.W.M., Lima,K.J., Rodrigues,J.S., Soares,E.C.S., Xavier,C.A.D., Araujo,A.S.F., Zerbini,F.M., Beserra,J.E.A. Jr.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_031451
ACTGGATGGCCGCGCAATTTTTGGTGTCCTCTCTACGTGGCGTGATCTGGCCCGTGTGTTTGAGTTAAAGTGTTTTATTTTATCCGGCCCAATAATTGAGGCGCTTTAGCCTCTAGATATCTGTGAAACTTCGATGGCAAGTTGTTGACTGTCGGTTATAAATGAAATTGGAATTGGGCCTCATCCTTTAACTCAAAATGCCCAAGCGGGATGCCCCATGGCGGTCGATGGCGGGAACTTCGAAGGTGAGCCGCAATGCGAATTATTCTCCTCGTGGAGGCTATGGTTTAAAATTCAACAAGGCCGCAGAATGGGTTAACAGGCCCATGTATAGGAAGCCCAGAATATACCGAACGTTACGGACGCCGGACGTTCCAAGAGGCTGTGAAGGGCCTTGTAAGATACAGTCGTACGATCAACGCCATGATATTGCACATACTGGAAAGGTGATGTGTATATCTGATGTGTCCCGTGGTAACGGTATTGCCCAGAGAGTTGGGAAACGTTTCTGTGTTAAGTCTGTCTATATTATAGGTAAGGTATGGATGGACGATAACATCAAGTTGAAGAACCACACTAACAGTGTTATGTTTTGGTTAGTTAGGGATAGGAGACCGAATGGCAATGCTATGGATTTCGGTCATCTTTTTAATATGTATGATAATGAGCCCAGTACTGCCACCGTGAAGAACGATCTTCGCGATCGTTTTCAGGTCTTGCACAGGTTTAATGCCAAGGTTACAGGTGGACAGTATGCGAGCAACGAGCAGGCGTTGGTTAGGCGATTTTGGAAGGTCAATAACCATGTGACCTATAACAATCAGGAAGCTGCAAGATATGAGAATCACACTGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCATCTAACCCTGTGTATGCAACCCTCAAAATCCGGATCTATTTTTATGATTCGGTGTTAAATTAGTAAAGTTTAAATTTTATTGAATGATTTTCCAGCACATAATTTACATACGATCTGTTTGTTGCGAAACGAACAGCTCTAATTACATTGTTAATGGAAATTACGCCTAATCTGTCTAAGTACATATTGACTAAATGTCTAAACCTAACTAAATAAGTCTGCCCAGAAGCTGTCAGGGATGTCGTCCAGATTTGGAAATTCAGGTATGCTGTGTGGAGATGCAATACTCTCCTCAAGTTGTGGTTGAACCGTACTTGTACATGGTAGACCCTTGTTGTTGTGAATGGTAGATCCTCTACCCTGTACGTCTTGAAATACAGGGGATTTGTTATTTCCCAGATATAAACGCCATTCTCCGCTTGAGGCACAGTGATGAGTTCCCCTGTGCGTGTATCCATATTCCGCGCAGTTGATATGTAAGTAGATCGAGCAGCCACACTCGAGATCAATTCGCCGTCTCCTGATGGCCCTCTTCTTGGCCTGCCTGTGTGCTTTCTTGATACAGGGGGGAGTCGAGTGTGATAAAGACGGCATTCTTAATAGTCCAGTTCCTGAGGGATGTATTTTCCTCTTTGTCGAGGAAATCTTTATAGCTAATCCCTGACCAGGATTGCAGAGCACGATTGCTGGGATCCATCCCTCCTTTAATTTGAACTGGCTTGCCGTATTTACAATTTGACTGCCAGTCTTTCTGGGCCCCAATCAGTTCCTTCCAATGCTTTAACTTTAGATATTGCGGACTGACGTCATCGATGACGTTAAACTCCACTTCGTTTGAGTAAATTCGAGCATTGAAATCCAGATGTCCACTTAAGTAGTTATGTGGGCCTAATGAACGAGCCCACATTGTCTTCCCTGTTCTCGAATCACCTTCTACTATGATACTGATTGGTCTTTCTGGCCGCGCAGCGGAACCCCTTCCAAAATATTCATCCGCCCACTCTTGCATCTCGTCTGGAACGTTAGTGAAAGATGATAGTTGAAACGGAGGAACCCATGGTTCTGGAGCCTTTGCAAAAAGGCGCTCTAAGTTCCCTTTTAAATTGTGATAATTCACCAAGAACGTCTTTGGATCTCCTGCTTTGATAATTTCAAGAGCTTCGCCCACACTTGGTGCATTGACGGCGTTGTGAAAGACGTCGTCTTTATTTGATCTTGTTCCCCCAGACACTGTGTATTGTCCGGATTCACAATAATCACCCTCTTTGGTGATGTAATTCTTGACGGCGTTGGTGTCTTTGGCTGCTTGTACATTTGGGTGAAAACTGGCAGACCTTCTTGGGTGAGTGAGGTCGAAAAATCTAACATCCTTGATATTTGACTTTCCGGAGAGCTGGATGAGACAGTGAAGGTGTGGGAGACCGTCTGAATGTTCCTCTCTTGCGACTCTGATGTATGTTGGTTTGACGACTGACCATTTGAGGGCATGAAGCATCTGAAGAGCTTCATCCTTTGATAAATCGCACTGAGGATATGTGAGAAATATATTTTTTGCAGAAAGTCTAAATGAACTGGGTTTCCGTGGCATATTTGTAAATATGGTAGGGGACACCGGGAGGAGCTCTCAACTTCTCTCCTATAATTTGGTGTCCTGGTGTCCTATATATAGTATAAGACACATAAAGCCTCTTGGGGACACCAAGGGGCAATTTCGGCCATCCATATAATATT

Gene Information

NCBI Accession YP_009310057.1
Location 198-953
Gene Name CP
Protein Name coat protein
Coding Region ATGCCCAAGCGGGATGCCCCATGGCGGTCGATGGCGGGAACTTCGAAGGTGAGCCGCAATGCGAATTATTCTCCTCGTGGAGGCTATGGTTTAAAATTCAACAAGGCCGCAGAATGGGTTAACAGGCCCATGTATAGGAAGCCCAGAATATACCGAACGTTACGGACGCCGGACGTTCCAAGAGGCTGTGAAGGGCCTTGTAAGATACAGTCGTACGATCAACGCCATGATATTGCACATACTGGAAAGGTGATGTGTATATCTGATGTGTCCCGTGGTAACGGTATTGCCCAGAGAGTTGGGAAACGTTTCTGTGTTAAGTCTGTCTATATTATAGGTAAGGTATGGATGGACGATAACATCAAGTTGAAGAACCACACTAACAGTGTTATGTTTTGGTTAGTTAGGGATAGGAGACCGAATGGCAATGCTATGGATTTCGGTCATCTTTTTAATATGTATGATAATGAGCCCAGTACTGCCACCGTGAAGAACGATCTTCGCGATCGTTTTCAGGTCTTGCACAGGTTTAATGCCAAGGTTACAGGTGGACAGTATGCGAGCAACGAGCAGGCGTTGGTTAGGCGATTTTGGAAGGTCAATAACCATGTGACCTATAACAATCAGGAAGCTGCAAGATATGAGAATCACACTGAGAACGCCCTGTTATTGTATATGGCATGTACTCATGCATCTAACCCTGTGTATGCAACCCTCAAAATCCGGATCTATTTTTATGATTCGGTGTTAAATTAG
Protein Sequence MPKRDAPWRSMAGTSKVSRNANYSPRGGYGLKFNKAAEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKIQSYDQRHDIAHTGKVMCISDVSRGNGIAQRVGKRFCVKSVYIIGKVWMDDNIKLKNHTNSVMFWLVRDRRPNGNAMDFGHLFNMYDNEPSTATVKNDLRDRFQVLHRFNAKVTGGQYASNEQALVRRFWKVNNHVTYNNQEAARYENHTENALLLYMACTHASNPVYATLKIRIYFYDSVLN

NCBI Accession YP_009310058.1
Location 950-1348
Gene Name REn
Protein Name replication enhancer protein
Coding Region ATGGATACACGCACAGGGGAACTCATCACTGTGCCTCAAGCGGAGAATGGCGTTTATATCTGGGAAATAACAAATCCCCTGTATTTCAAGACGTACAGGGTAGAGGATCTACCATTCACAACAACAAGGGTCTACCATGTACAAGTACGGTTCAACCACAACTTGAGGAGAGTATTGCATCTCCACACAGCATACCTGAATTTCCAAATCTGGACGACATCCCTGACAGCTTCTGGGCAGACTTATTTAGTTAGGTTTAGACATTTAGTCAATATGTACTTAGACAGATTAGGCGTAATTTCCATTAACAATGTAATTAGAGCTGTTCGTTTCGCAACAAACAGATCGTATGTAAATTATGTGCTGGAAAATCATTCAATAAAATTTAAACTTTACTAA
Protein Sequence MDTRTGELITVPQAENGVYIWEITNPLYFKTYRVEDLPFTTTRVYHVQVRFNHNLRRVLHLHTAYLNFQIWTTSLTASGQTYLVRFRHLVNMYLDRLGVISINNVIRAVRFATNRSYVNYVLENHSIKFKLY

NCBI Accession YP_009310059.1
Location 1095-1484
Gene Name TrAP
Protein Name trans-activating protein
Coding Region ATGCCGTCTTTATCACACTCGACTCCCCCCTGTATCAAGAAAGCACACAGGCAGGCCAAGAAGAGGGCCATCAGGAGACGGCGAATTGATCTCGAGTGTGGCTGCTCGATCTACTTACATATCAACTGCGCGGAATATGGATACACGCACAGGGGAACTCATCACTGTGCCTCAAGCGGAGAATGGCGTTTATATCTGGGAAATAACAAATCCCCTGTATTTCAAGACGTACAGGGTAGAGGATCTACCATTCACAACAACAAGGGTCTACCATGTACAAGTACGGTTCAACCACAACTTGAGGAGAGTATTGCATCTCCACACAGCATACCTGAATTTCCAAATCTGGACGACATCCCTGACAGCTTCTGGGCAGACTTATTTAGTTAG
Protein Sequence MPSLSHSTPPCIKKAHRQAKKRAIRRRRIDLECGCSIYLHINCAEYGYTHRGTHHCASSGEWRLYLGNNKSPVFQDVQGRGSTIHNNKGLPCTSTVQPQLEESIASPHSIPEFPNLDDIPDSFWADLFS

NCBI Accession YP_009310060.1
Location 1396-2478
Gene Name REP
Protein Name replication-associated protein
Coding Region ATGCCACGGAAACCCAGTTCATTTAGACTTTCTGCAAAAAATATATTTCTCACATATCCTCAGTGCGATTTATCAAAGGATGAAGCTCTTCAGATGCTTCATGCCCTCAAATGGTCAGTCGTCAAACCAACATACATCAGAGTCGCAAGAGAGGAACATTCAGACGGTCTCCCACACCTTCACTGTCTCATCCAGCTCTCCGGAAAGTCAAATATCAAGGATGTTAGATTTTTCGACCTCACTCACCCAAGAAGGTCTGCCAGTTTTCACCCAAATGTACAAGCAGCCAAAGACACCAACGCCGTCAAGAATTACATCACCAAAGAGGGTGATTATTGTGAATCCGGACAATACACAGTGTCTGGGGGAACAAGATCAAATAAAGACGACGTCTTTCACAACGCCGTCAATGCACCAAGTGTGGGCGAAGCTCTTGAAATTATCAAAGCAGGAGATCCAAAGACGTTCTTGGTGAATTATCACAATTTAAAAGGGAACTTAGAGCGCCTTTTTGCAAAGGCTCCAGAACCATGGGTTCCTCCGTTTCAACTATCATCTTTCACTAACGTTCCAGACGAGATGCAAGAGTGGGCGGATGAATATTTTGGAAGGGGTTCCGCTGCGCGGCCAGAAAGACCAATCAGTATCATAGTAGAAGGTGATTCGAGAACAGGGAAGACAATGTGGGCTCGTTCATTAGGCCCACATAACTACTTAAGTGGACATCTGGATTTCAATGCTCGAATTTACTCAAACGAAGTGGAGTTTAACGTCATCGATGACGTCAGTCCGCAATATCTAAAGTTAAAGCATTGGAAGGAACTGATTGGGGCCCAGAAAGACTGGCAGTCAAATTGTAAATACGGCAAGCCAGTTCAAATTAAAGGAGGGATGGATCCCAGCAATCGTGCTCTGCAATCCTGGTCAGGGATTAGCTATAAAGATTTCCTCGACAAAGAGGAAAATACATCCCTCAGGAACTGGACTATTAAGAATGCCGTCTTTATCACACTCGACTCCCCCCTGTATCAAGAAAGCACACAGGCAGGCCAAGAAGAGGGCCATCAGGAGACGGCGAATTGA
Protein Sequence MPRKPSSFRLSAKNIFLTYPQCDLSKDEALQMLHALKWSVVKPTYIRVAREEHSDGLPHLHCLIQLSGKSNIKDVRFFDLTHPRRSASFHPNVQAAKDTNAVKNYITKEGDYCESGQYTVSGGTRSNKDDVFHNAVNAPSVGEALEIIKAGDPKTFLVNYHNLKGNLERLFAKAPEPWVPPFQLSSFTNVPDEMQEWADEYFGRGSAARPERPISIIVEGDSRTGKTMWARSLGPHNYLSGHLDFNARIYSNEVEFNVIDDVSPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGMDPSNRALQSWSGISYKDFLDKEENTSLRNWTIKNAVFITLDSPLYQESTQAGQEEGHQETAN

NCBI Accession YP_009310061.1
Location 2004-2399
Gene Name AC4
Protein Name AC4
Coding Region ATGAAGCTCTTCAGATGCTTCATGCCCTCAAATGGTCAGTCGTCAAACCAACATACATCAGAGTCGCAAGAGAGGAACATTCAGACGGTCTCCCACACCTTCACTGTCTCATCCAGCTCTCCGGAAAGTCAAATATCAAGGATGTTAGATTTTTCGACCTCACTCACCCAAGAAGGTCTGCCAGTTTTCACCCAAATGTACAAGCAGCCAAAGACACCAACGCCGTCAAGAATTACATCACCAAAGAGGGTGATTATTGTGAATCCGGACAATACACAGTGTCTGGGGGAACAAGATCAAATAAAGACGACGTCTTTCACAACGCCGTCAATGCACCAAGTGTGGGCGAAGCTCTTGAAATTATCAAAGCAGGAGATCCAAAGACGTTCTTGGTGA
Protein Sequence MKLFRCFMPSNGQSSNQHTSESQERNIQTVSHTFTVSSSSPESQISRMLDFSTSLTQEGLPVFTQMYKQPKTPTPSRITSPKRVIIVNPDNTQCLGEQDQIKTTSFTTPSMHQVWAKLLKLSKQEIQRRSW

References More References in PubMed

1

Molecular characterization and experimental host range of an isolate of Wissadula golden mosaic St. Thomas virus.

Collins AM, et al.  Virus Genes. 2009 Dec;39(3):387-95. doi: 10.1007/s11262-009-0401-y. Epub 2009 Sep 20.

PMID: 19768650
2

Molecular characterization and experimental host range of an isolate of Macroptilium golden mosaic virus that infects Wissadula amplissima in Jamaica.

Collins A, et al.  Virus Res. 2010 Jun;150(1-2):148-52. doi: 10.1016/j.virusres.2010.03.008. Epub 2010 Mar 25.

PMID: 20347895
3

First report of a complete genome sequence for a begomovirus infecting Jatropha gossypifolia in the Americas.

Simmonds-Gordon RN, et al.  Arch Virol. 2014 Oct;159(10):2815-8. doi: 10.1007/s00705-014-2112-5. Epub 2014 May 29.

PMID: 24872185
4

Genetic Diversity Among Geminiviruses Associated with the Weed Species Sida spp., Macroptilium lathyroides, and Wissadula amplissima from Jamaica.

Roye ME, et al.  Plant Dis. 1997 Nov;81(11):1251-1258. doi: 10.1094/PDIS.1997.81.11.1251.

PMID: 30861729