Whitefly-associated begomovirus 2
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_003029125.1 |
| Isolate |
Guatemala |
| Release date |
2018/8/26 |
| Submitter |
Rosario,K., Seah,Y.M., Marr,C., Varsani,A., Kraberger,S., Stainton,D., Moriones,E., Polston,J.E., Duffy,S., Breitbart,M. |
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAATATTACCGGATGGCCGCCCGCCCCGCCCCGCTCCCGGTCCCACCACGCACTAAAAGACAGCTATCGTCCAATCATATTGCGTCTGCCGCGTCTAATTATTTGTAACTCCTTCGCGCCCAAGTTCAGCGCTGTCTTTTATAAAGCCCATGACCCTGGCCCAATGACTTTAACTCAAAATGCCTAAGCGCTCCGCCCCTTGGCGTCCAATGGCGGGAACGTCTAAGGTGAGTCGATCCGCTAACTATTCTCCTCGTGCAGGAATTGGGCCCAAAGTTAACAAGGCCGCCGAATGGGTTAATCGGCCCATGTACAGGAAGCCCAGGATCTACCGGACTCTAAGATCGCCCGACGTGCCCAGAGGATGTGAAGGCCCTTGTAAGGTCCAGTCCTACGAACAGCGCCATGACATATCACACGTTGGTAAGGTCATGTGTATATCTGATGTCACACGTGGGAACGGTATTACCCACCGTGTCGGCAAGCGTTTTTGTGTTAAGTCCGTATATATTTTAGGCAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTTAGGGACCGTCGACCCTATGGAACCCCTATGGACTTTGGCCAGGTGTTTAACATGTTTGATAACGAGCCCAGCACTGCTACGGTCAAGAACGATCTTCGCGATCGTTTCCAGGTCATGCACCGGTTCTATGGCAAAGTCACTGGTGGTCAGTACGCCAGCAATGAACAGGCAATTGTCAGGCGATTTTGGAAGGTCAACACTCATGTGGTCTACAATCATCAGGCAGATGGCACGTACGCCAATCATACGGAGAACGCTCTGTTATTGTATATGGCATGTACTCATGCGTCTAACCCCGTGTATGCAACTCTTAAGATCCGGATCTATTTTTACGATTCGGTCATGAATTAATAAATTTTGAATTTTATTGAATGATCTTCCAGTACATAATTGACATACGATCTGTCCGTTGCGAATCGAACAGCTCTAATTACATTGTTTATGGAAATCACGCCTAACTGATCTAAATACAACATAACTAAATGTCTAAACCTATTTAAATAAGTCGACCCAGAAGCTGTCAGTGAAGTCGTCCAGACTTGGAAGTTCAGGTACGCCTTGTGGAGATCCAATGCTCTCCTCAGGTTGTGGTTGAATCGTATCTGGACGCTGTATATTCTGGTCCTGGTGTACAGCGGTTCCTCTACTCGGTACATCTTGAAATAGAGGGGATTTTCGATCTCCCAGATATACACGCCATTCTCTGCCTGAGGTACAGTGATGAGTTCCCCTGTGCGTGAATCCATGCCCTGTGCAGCCTATGTGGAAGTATATGGAGCACCCGCACTCTAAATCAATGCGCCTCCGCCTGACCGCTCTCTTCTTGGCCTTCTTGTGTTCTCTCTTGATAGAGGGGGGAGTCGATTGTGATGAAGAGCGCATTCTTGAGGGTCCAGTTCTTGAGAGCTGTGTTTTCCTCTTTGTTCAGGAAATCTTTATAGCTGGAACCCTCACCAGGATTGCAAAGCACGATTGATGGGATCCCACCTTTAATTTGAACTGGCTTGCCGTATTTACAATTTGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAACTTTAGATAGTGCGGTGCGACGTCATCGATGACGTTATACTCCACTTCGTTTGAAAACACGCGCGGATTGAAGTCCAGGTGTCCACTGAGGTAGTTGTGTGGTCCCAACGAACGAGCCCACATTGTCTTTCCCGTTCTCGAATCACCTTCAACTATGAGACTCAGTGGTCTTTCCGGCCGCGCAGCGGGATCCGTTCCGAATAACTCATCAGCCCATTCTTTCATCTCGTCGGGCACGTTAGTGAATGAGGAGAGTTGAAACGGAGGAGCCCATGGTTCCGGAGCCTTCTGAAAAATCCTGTGCGCGTTTGTAACCAGGTTGTGATGTTGAAGGAAGAAATGTTGTGGTTGTTCTTCCTTGATTATTCTTAGTGCTTCCTCCGCACATGACGCATTTAACGCCTTGGCATATGTATCGTTAACTGTCTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAATTCTCCCCATTCGATCGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTCGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCGGGTTGGGGAGACCAGATCGAAGAATCTGTTATTCTGGCACTGGAACTTGCCTTGGAATTGGATGAGGACATGCAGATGAGGTTCCCCATTCTCATGTAGCTCTCTGCATATCTTGATGAATTTCTTGTTGACCGGAGTTGTTAGGTTTTGTAATTGGGAAAGTGCCTCCTCTTTAGTCAGAGAGCACTGTGGATATGTGAGGAAATAGTTTTTGGCGTTCACTCTAAATTTCTTAGCCGGTGGCATTTTTGTAATAAGAGGGTGTACACCAATTGAGCTCCTCTCAAACTTAGCTCATTCAATTGGTGTTTGGGGTGTTATTTATACTAGAACCCTCAATAGACGGATTTGCAACACGTGGCGGCCATCCGAA
Gene Information
|
NCBI Accession
|
YP_009508328.1
|
|
Location
|
180-935 |
|
Protein Name
|
capsid protein |
|
Coding Region
|
ATGCCTAAGCGCTCCGCCCCTTGGCGTCCAATGGCGGGAACGTCTAAGGTGAGTCGATCCGCTAACTATTCTCCTCGTGCAGGAATTGGGCCCAAAGTTAACAAGGCCGCCGAATGGGTTAATCGGCCCATGTACAGGAAGCCCAGGATCTACCGGACTCTAAGATCGCCCGACGTGCCCAGAGGATGTGAAGGCCCTTGTAAGGTCCAGTCCTACGAACAGCGCCATGACATATCACACGTTGGTAAGGTCATGTGTATATCTGATGTCACACGTGGGAACGGTATTACCCACCGTGTCGGCAAGCGTTTTTGTGTTAAGTCCGTATATATTTTAGGCAAGATATGGATGGACGAGAATATCAAGTTGAAGAACCACACGAACAGCGTCATGTTCTGGTTGGTTAGGGACCGTCGACCCTATGGAACCCCTATGGACTTTGGCCAGGTGTTTAACATGTTTGATAACGAGCCCAGCACTGCTACGGTCAAGAACGATCTTCGCGATCGTTTCCAGGTCATGCACCGGTTCTATGGCAAAGTCACTGGTGGTCAGTACGCCAGCAATGAACAGGCAATTGTCAGGCGATTTTGGAAGGTCAACACTCATGTGGTCTACAATCATCAGGCAGATGGCACGTACGCCAATCATACGGAGAACGCTCTGTTATTGTATATGGCATGTACTCATGCGTCTAACCCCGTGTATGCAACTCTTAAGATCCGGATCTATTTTTACGATTCGGTCATGAATTAA |
|
Protein Sequence
|
MPKRSAPWRPMAGTSKVSRSANYSPRAGIGPKVNKAAEWVNRPMYRKPRIYRTLRSPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHRFYGKVTGGQYASNEQAIVRRFWKVNTHVVYNHQADGTYANHTENALLLYMACTHASNPVYATLKIRIYFYDSVMN |
|
NCBI Accession
|
YP_009508329.1
|
|
Location
|
932-1330 |
|
Protein Name
|
replication enhancer protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAACTCATCACTGTACCTCAGGCAGAGAATGGCGTGTATATCTGGGAGATCGAAAATCCCCTCTATTTCAAGATGTACCGAGTAGAGGAACCGCTGTACACCAGGACCAGAATATACAGCGTCCAGATACGATTCAACCACAACCTGAGGAGAGCATTGGATCTCCACAAGGCGTACCTGAACTTCCAAGTCTGGACGACTTCACTGACAGCTTCTGGGTCGACTTATTTAAATAGGTTTAGACATTTAGTTATGTTGTATTTAGATCAGTTAGGCGTGATTTCCATAAACAATGTAATTAGAGCTGTTCGATTCGCAACGGACAGATCGTATGTCAATTATGTACTGGAAGATCATTCAATAAAATTCAAAATTTATTAA |
|
Protein Sequence
|
MDSRTGELITVPQAENGVYIWEIENPLYFKMYRVEEPLYTRTRIYSVQIRFNHNLRRALDLHKAYLNFQVWTTSLTASGSTYLNRFRHLVMLYLDQLGVISINNVIRAVRFATDRSYVNYVLEDHSIKFKIY |
|
NCBI Accession
|
YP_009508330.1
|
|
Location
|
1077-1466 |
|
Protein Name
|
transactivator protein |
|
Coding Region
|
ATGCGCTCTTCATCACAATCGACTCCCCCCTCTATCAAGAGAGAACACAAGAAGGCCAAGAAGAGAGCGGTCAGGCGGAGGCGCATTGATTTAGAGTGCGGGTGCTCCATATACTTCCACATAGGCTGCACAGGGCATGGATTCACGCACAGGGGAACTCATCACTGTACCTCAGGCAGAGAATGGCGTGTATATCTGGGAGATCGAAAATCCCCTCTATTTCAAGATGTACCGAGTAGAGGAACCGCTGTACACCAGGACCAGAATATACAGCGTCCAGATACGATTCAACCACAACCTGAGGAGAGCATTGGATCTCCACAAGGCGTACCTGAACTTCCAAGTCTGGACGACTTCACTGACAGCTTCTGGGTCGACTTATTTAAATAG |
|
Protein Sequence
|
MRSSSQSTPPSIKREHKKAKKRAVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGREWRVYLGDRKSPLFQDVPSRGTAVHQDQNIQRPDTIQPQPEESIGSPQGVPELPSLDDFTDSFWVDLFK |
|
NCBI Accession
|
YP_009508331.1
|
|
Location
|
1378-2463 |
|
Protein Name
|
replication initiator protein |
|
Coding Region
|
ATGCCACCGGCTAAGAAATTTAGAGTGAACGCCAAAAACTATTTCCTCACATATCCACAGTGCTCTCTGACTAAAGAGGAGGCACTTTCCCAATTACAAAACCTAACAACTCCGGTCAACAAGAAATTCATCAAGATATGCAGAGAGCTACATGAGAATGGGGAACCTCATCTGCATGTCCTCATCCAATTCCAAGGCAAGTTCCAGTGCCAGAATAACAGATTCTTCGATCTGGTCTCCCCAACCCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCGAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACGATCGAATGGGGAGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACAGTTAACGATACATATGCCAAGGCGTTAAATGCGTCATGTGCGGAGGAAGCACTAAGAATAATCAAGGAAGAACAACCACAACATTTCTTCCTTCAACATCACAACCTGGTTACAAACGCGCACAGGATTTTTCAGAAGGCTCCGGAACCATGGGCTCCTCCGTTTCAACTCTCCTCATTCACTAACGTGCCCGACGAGATGAAAGAATGGGCTGATGAGTTATTCGGAACGGATCCCGCTGCGCGGCCGGAAAGACCACTGAGTCTCATAGTTGAAGGTGATTCGAGAACGGGAAAGACAATGTGGGCTCGTTCGTTGGGACCACACAACTACCTCAGTGGACACCTGGACTTCAATCCGCGCGTGTTTTCAAACGAAGTGGAGTATAACGTCATCGATGACGTCGCACCGCACTATCTAAAGTTAAAGCACTGGAAAGAATTGATTGGGGCCCAAAGGGACTGGCAGTCAAATTGTAAATACGGCAAGCCAGTTCAAATTAAAGGTGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTTCCAGCTATAAAGATTTCCTGAACAAAGAGGAAAACACAGCTCTCAAGAACTGGACCCTCAAGAATGCGCTCTTCATCACAATCGACTCCCCCCTCTATCAAGAGAGAACACAAGAAGGCCAAGAAGAGAGCGGTCAGGCGGAGGCGCATTGA |
|
Protein Sequence
|
MPPAKKFRVNAKNYFLTYPQCSLTKEEALSQLQNLTTPVNKKFIKICRELHENGEPHLHVLIQFQGKFQCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGQQTVNDTYAKALNASCAEEALRIIKEEQPQHFFLQHHNLVTNAHRIFQKAPEPWAPPFQLSSFTNVPDEMKEWADELFGTDPAARPERPLSLIVEGDSRTGKTMWARSLGPHNYLSGHLDFNPRVFSNEVEYNVIDDVAPHYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLNKEENTALKNWTLKNALFITIDSPLYQERTQEGQEESGQAEAH |
|
NCBI Accession
|
YP_009508332.1
|
|
Location
|
2049-2306 |
|
Protein Name
|
AC4 |
|
Coding Region
|
ATGGGGAACCTCATCTGCATGTCCTCATCCAATTCCAAGGCAAGTTCCAGTGCCAGAATAACAGATTCTTCGATCTGGTCTCCCCAACCCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCGAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACGATCGAATGGGGAGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAGACAGTTAACGATACATATGCCAAGGCGTTAA |
|
Protein Sequence
|
MGNLICMSSSNSKASSSARITDSSIWSPQPGQHISIRTFRELNRAPTSSPTSTRTEIRSNGENSRSTADLLEEVSRQLTIHMPRR |