West African Asystasia virus 2
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_002824745.1 |
| Release date |
2018/8/25 |
| Submitter |
Wyant,P., Strohmeier,S., Fischer,A., Schafer,B., Briddon,R.W., Krenz,B., Jeske,H., Wyant,P.S., Allinger,A. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCTTTTTGATAGTGACTTTTGGGCCCACGCGCTTTTATTGGGCCAATTAAAATGGCCCATTTGAGCTTAGATAAATATTTTGGGCCTATATACTTGGGCCCTAAGTTTCGTGGACTTCAAAATGTGGGATCCTTTGGTGAATGAGTTCCCTGACACTGTCCATGGTTTTCGGTGCATGTTAGCCTGCAAGTATTTGCAGGCCGTAGAGAAGGAGTACGAGCCCAATACATTGGGCCACGATCTGATACGTGATTTGATCTCAGTTTTACGGGCCAAGAAATATGTCGAAGCGACCCGCAGATACTTTGATTTCCTTACCCGCCTCAAAGGTACGTCGTCGTCTGAACTTCGACAGCCCTTATGCGAGCCGTGCTATTGTCCCTATTGCCCTCGGCACAAACAGACGTCGTGCATGGGTCAACCGGCCCATGTACAGGAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTTCCACGTGGTTGTGAGGGCCCATGTAAGGTCCAGTCATACGAGCAGAGAGATGACGTGTCTCATATTGGGAAGGTTCGATGTATTTCCGATGTGACTAAGGGTGGAGGTTTGACTCATAGAACTGGTAAGAGGTTCTGCATCAAGTCTATATATATCTTGGGGAAGGTGTGGATGGATGATGACATCAAGAAACAGAACCACACGAATCATGCTATGTTCTTTGTTGTTCGTGATAGGCGTCCCTATGGTAGTCCTATGGATTTCGGTCAGGTATTTAATATGTTTGATAATGAGCCGAGCACGGCGACTGTGAAGAATGATCTACGTGATAGGTTCCAGGTGATGAGGAAATTCCATGCTGCAGTGACCGGAGGTCCTTCTGGTACGAAGGAACAGGCTCTGGTGAAGAAATTTATGAAATTAAATACGCACGTGATGTATAATCATCAAGAGGCTGGGAAATACGAAAATCATACGGAGAATGCTTTGTTGCTGTATATGGCATGTACTCATGCCAATAATCCTTTGTATGCAACCCTTAAAATTAGGGTTTATTTTTATGACTCTGTTTTGAATTAATAAATATTAAATTTTATATCATATGCTTCTGCTACATGTTATGTGCCATGTAATACATTATACAATACAAATTTAATTGCTCTAATTAAATTGTTAATTGAAAGCACACCTAAACTATTTAGATATCTAATTACATGTTTACTAAATACTCTTAAGAAATGAGAAGTCTGAGGGCGTAAGCTCGTCCAGGCCTGGAAGGTCAATAAACATCTGTGAATCCCCAATGCCTTCCTCAGGTTGTGGTTGAATCTCACTTGTATTTTGATTATGTCCCATGGTCGGGACATTGGTCGGACGTCGTGGTTGAGGATCTTGAAATACAGGGGATTTGATATTTCCCAGATATAGACGCCATTCTTGGCCTGAGCTGCAGTGATGTTCTCCTCTGTGCGTGAATCCATGGTTGGTGCAGTTGATATGTAGGAAGTATGTGCAGCCACAATTTAAATCAATCCTCTTCCTGCGGATTGGTTTGCGTTTCCCGAGTCTGTGGCTGACTTTGATTGGCACCTGAGTAGAGTGGGCCGACGAGGGTGATGAATGATGCATTCTTTATGGCCCAGGTTTTGAGGGATGAATTTTTTTCTTCCTCGAGGTACTCTTTATATGATGATGTCGGGCCTGGATTGCAGAGGAAGATAGTGGGAATGCCACCTTTAATTTGAACTGGCTTCCCGTACTTGACATTGCTATTCCAGTTCCTTTGGGCCCCCATGAATTCCTTAAAGTGTTTTAGATAGTGGGGGTCGACATCATCAATGACGTTGTACCATGCGTCATTGCTGTATACCTTTGGACTGAGGTCCAGGTGGCCACATAGATAGTTATGTGGTCCCAGAGACCTTGCCCACATGGTTTTCCCTGTCCTGCTATCACCCTCAATGACAATACTATTCGGCCTCCATGGACGCGCAGCGGGACCCATCACATTTTCGGACACCCAGACTTCGAGTTCCTCTGGAACTTGATCGAAGGAGGAAGAAAGAAAGGGTGAAACATATGCCTCTGGAGGAGACATGAAAATCCTATCTAAATTGGATTTTAAATTATGATATTGAAAAATAAAATCCTTTGGGAGTTTCTCCCTTATTATTGCTAAAGCTGCATCTGCAGAACCTGCGTTTAAAGCCTCTGCACATGCATCGTTAGCATTCTGGCAGCCTCCACGAGCAGATCGTCCGTCGATCTGGAATGTGCCCCATTCGAGTGTATCTCCATCCTTCTCGATGTAGGACTTGACATCGGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGATCTGGTTGGGGATACCAGATCGAAGAATCGTTTATTTTGGCACTTGAATTTGCCTTCGAATTGCACAAGCATGTGGAGATGAGGTTCCCCATTCTCGTGCAGTTCTCTGCAAATTTTGATGAACAGTTTATTTGTGGGTGTTGAGAGGTTTATAATTTGGGAAAGTGCCTCCTCTTTGGTGAGGGGGCACTGTGGATAAGTGAGAAAATAATTTTTGCAATTAATGAGAAATCGCTTGGGAGGAGCCATTGACTTGGTCAATTGGGTCTCAGACATTTATCCCTGGTATATCGGGTCTCAATATATAGTGAGACCCAAATGGCATTTTGGTAATTATGCAACTTTAATTTGAATTGCACATGGGTAAAGCGGCCATCCGTATAATATT
Gene Information
|
NCBI Accession
|
YP_009506563.1
|
|
Location
|
135-485 |
|
Gene Name
|
AV2 |
|
Protein Name
|
pre-coat protein |
|
Coding Region
|
ATGTGGGATCCTTTGGTGAATGAGTTCCCTGACACTGTCCATGGTTTTCGGTGCATGTTAGCCTGCAAGTATTTGCAGGCCGTAGAGAAGGAGTACGAGCCCAATACATTGGGCCACGATCTGATACGTGATTTGATCTCAGTTTTACGGGCCAAGAAATATGTCGAAGCGACCCGCAGATACTTTGATTTCCTTACCCGCCTCAAAGGTACGTCGTCGTCTGAACTTCGACAGCCCTTATGCGAGCCGTGCTATTGTCCCTATTGCCCTCGGCACAAACAGACGTCGTGCATGGGTCAACCGGCCCATGTACAGGAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGA |
|
Protein Sequence
|
MWDPLVNEFPDTVHGFRCMLACKYLQAVEKEYEPNTLGHDLIRDLISVLRAKKYVEATRRYFDFLTRLKGTSSSELRQPLCEPCYCPYCPRHKQTSCMGQPAHVQEAQNVQNVQKP |
|
NCBI Accession
|
YP_009506564.1
|
|
Location
|
295-1068 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGAAGCGACCCGCAGATACTTTGATTTCCTTACCCGCCTCAAAGGTACGTCGTCGTCTGAACTTCGACAGCCCTTATGCGAGCCGTGCTATTGTCCCTATTGCCCTCGGCACAAACAGACGTCGTGCATGGGTCAACCGGCCCATGTACAGGAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTTCCACGTGGTTGTGAGGGCCCATGTAAGGTCCAGTCATACGAGCAGAGAGATGACGTGTCTCATATTGGGAAGGTTCGATGTATTTCCGATGTGACTAAGGGTGGAGGTTTGACTCATAGAACTGGTAAGAGGTTCTGCATCAAGTCTATATATATCTTGGGGAAGGTGTGGATGGATGATGACATCAAGAAACAGAACCACACGAATCATGCTATGTTCTTTGTTGTTCGTGATAGGCGTCCCTATGGTAGTCCTATGGATTTCGGTCAGGTATTTAATATGTTTGATAATGAGCCGAGCACGGCGACTGTGAAGAATGATCTACGTGATAGGTTCCAGGTGATGAGGAAATTCCATGCTGCAGTGACCGGAGGTCCTTCTGGTACGAAGGAACAGGCTCTGGTGAAGAAATTTATGAAATTAAATACGCACGTGATGTATAATCATCAAGAGGCTGGGAAATACGAAAATCATACGGAGAATGCTTTGTTGCTGTATATGGCATGTACTCATGCCAATAATCCTTTGTATGCAACCCTTAAAATTAGGGTTTATTTTTATGACTCTGTTTTGAATTAA |
|
Protein Sequence
|
MSKRPADTLISLPASKVRRRLNFDSPYASRAIVPIALGTNRRRAWVNRPMYRKPRMYRMYRSPDVPRGCEGPCKVQSYEQRDDVSHIGKVRCISDVTKGGGLTHRTGKRFCIKSIYILGKVWMDDDIKKQNHTNHAMFFVVRDRRPYGSPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMRKFHAAVTGGPSGTKEQALVKKFMKLNTHVMYNHQEAGKYENHTENALLLYMACTHANNPLYATLKIRVYFYDSVLN |
|
NCBI Accession
|
YP_009506565.1
|
|
Location
|
1107-1469 |
|
Gene Name
|
AC3 |
|
Protein Name
|
replication enhancer |
|
Coding Region
|
ATGGATTCACGCACAGAGGAGAACATCACTGCAGCTCAGGCCAAGAATGGCGTCTATATCTGGGAAATATCAAATCCCCTGTATTTCAAGATCCTCAACCACGACGTCCGACCAATGTCCCGACCATGGGACATAATCAAAATACAAGTGAGATTCAACCACAACCTGAGGAAGGCATTGGGGATTCACAGATGTTTATTGACCTTCCAGGCCTGGACGAGCTTACGCCCTCAGACTTCTCATTTCTTAAGAGTATTTAGTAAACATGTAATTAGATATCTAAATAGTTTAGGTGTGCTTTCAATTAACAATTTAATTAGAGCAATTAAATTTGTATTGTATAATGTATTACATGGCACATAA |
|
Protein Sequence
|
MDSRTEENITAAQAKNGVYIWEISNPLYFKILNHDVRPMSRPWDIIKIQVRFNHNLRKALGIHRCLLTFQAWTSLRPQTSHFLRVFSKHVIRYLNSLGVLSINNLIRAIKFVLYNVLHGT |
|
NCBI Accession
|
YP_009506566.1
|
|
Location
|
1210-1617 |
|
Gene Name
|
AC2 |
|
Protein Name
|
transcriptional regulator |
|
Coding Region
|
ATGCATCATTCATCACCCTCGTCGGCCCACTCTACTCAGGTGCCAATCAAAGTCAGCCACAGACTCGGGAAACGCAAACCAATCCGCAGGAAGAGGATTGATTTAAATTGTGGCTGCACATACTTCCTACATATCAACTGCACCAACCATGGATTCACGCACAGAGGAGAACATCACTGCAGCTCAGGCCAAGAATGGCGTCTATATCTGGGAAATATCAAATCCCCTGTATTTCAAGATCCTCAACCACGACGTCCGACCAATGTCCCGACCATGGGACATAATCAAAATACAAGTGAGATTCAACCACAACCTGAGGAAGGCATTGGGGATTCACAGATGTTTATTGACCTTCCAGGCCTGGACGAGCTTACGCCCTCAGACTTCTCATTTCTTAAGAGTATTTAG |
|
Protein Sequence
|
MHHSSPSSAHSTQVPIKVSHRLGKRKPIRRKRIDLNCGCTYFLHINCTNHGFTHRGEHHCSSGQEWRLYLGNIKSPVFQDPQPRRPTNVPTMGHNQNTSEIQPQPEEGIGDSQMFIDLPGLDELTPSDFSFLKSI |
|
NCBI Accession
|
YP_009506567.1
|
|
Location
|
1517-2605 |
|
Gene Name
|
AC1 |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGGCTCCTCCCAAGCGATTTCTCATTAATTGCAAAAATTATTTTCTCACTTATCCACAGTGCCCCCTCACCAAAGAGGAGGCACTTTCCCAAATTATAAACCTCTCAACACCCACAAATAAACTGTTCATCAAAATTTGCAGAGAACTGCACGAGAATGGGGAACCTCATCTCCACATGCTTGTGCAATTCGAAGGCAAATTCAAGTGCCAAAATAAACGATTCTTCGATCTGGTATCCCCAACCAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATCGAGAAGGATGGAGATACACTCGAATGGGGCACATTCCAGATCGACGGACGATCTGCTCGTGGAGGCTGCCAGAATGCTAACGATGCATGTGCAGAGGCTTTAAACGCAGGTTCTGCAGATGCAGCTTTAGCAATAATAAGGGAGAAACTCCCAAAGGATTTTATTTTTCAATATCATAATTTAAAATCCAATTTAGATAGGATTTTCATGTCTCCTCCAGAGGCATATGTTTCACCCTTTCTTTCTTCCTCCTTCGATCAAGTTCCAGAGGAACTCGAAGTCTGGGTGTCCGAAAATGTGATGGGTCCCGCTGCGCGTCCATGGAGGCCGAATAGTATTGTCATTGAGGGTGATAGCAGGACAGGGAAAACCATGTGGGCAAGGTCTCTGGGACCACATAACTATCTATGTGGCCACCTGGACCTCAGTCCAAAGGTATACAGCAATGACGCATGGTACAACGTCATTGATGATGTCGACCCCCACTATCTAAAACACTTTAAGGAATTCATGGGGGCCCAAAGGAACTGGAATAGCAATGTCAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGCATTCCCACTATCTTCCTCTGCAATCCAGGCCCGACATCATCATATAAAGAGTACCTCGAGGAAGAAAAAAATTCATCCCTCAAAACCTGGGCCATAAAGAATGCATCATTCATCACCCTCGTCGGCCCACTCTACTCAGGTGCCAATCAAAGTCAGCCACAGACTCGGGAAACGCAAACCAATCCGCAGGAAGAGGATTGA |
|
Protein Sequence
|
MAPPKRFLINCKNYFLTYPQCPLTKEEALSQIINLSTPTNKLFIKICRELHENGEPHLHMLVQFEGKFKCQNKRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIEKDGDTLEWGTFQIDGRSARGGCQNANDACAEALNAGSADAALAIIREKLPKDFIFQYHNLKSNLDRIFMSPPEAYVSPFLSSSFDQVPEELEVWVSENVMGPAARPWRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRNWNSNVKYGKPVQIKGGIPTIFLCNPGPTSSYKEYLEEEKNSSLKTWAIKNASFITLVGPLYSGANQSQPQTRETQTNPQEED |
|
NCBI Accession
|
YP_009506568.1
|
|
Location
|
2191-2448 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGGAACCTCATCTCCACATGCTTGTGCAATTCGAAGGCAAATTCAAGTGCCAAAATAAACGATTCTTCGATCTGGTATCCCCAACCAGATCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATCGAGAAGGATGGAGATACACTCGAATGGGGCACATTCCAGATCGACGGACGATCTGCTCGTGGAGGCTGCCAGAATGCTAACGATGCATGTGCAGAGGCTTTAA |
|
Protein Sequence
|
MGNLISTCLCNSKANSSAKINDSSIWYPQPDQHISIRTFRELNQAPMSSPTSRRMEIHSNGAHSRSTDDLLVEAARMLTMHVQRL |