Vigna yellow mosaic virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_002824725.1 |
| Isolate |
Mexico: Morelos |
| Release date |
2018/8/25 |
| Submitter |
Torres-Herrera,I., Cardenas-Conejo,Y., Ambriz-Granados,S., Mauricio-Castillo,J.A., Moreno-Valenzuela,O., Arguello-Astorga,G.R. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGATTTTTTTGGAGACCCCTTCATCTCGCTCCACGTGTCCCAACCCTATTCACGTGGACCACATGTCGTCCAATCAAAAGTCGTTTGTCGAGCTTCTTTAATTTAAACTTGGTCACAAAGTTCAATAAGGATATATACGTTGGACGACTGTCGATATTTTCGTCTTTAATTCGAAATGCCTAAGCGGGATGCCCCATGGCGTAACATGGCGGGGACCTCAAAGGTTACCCGTTCGAGTAATTATTCTCCTCGTGGTGGTCCTAAATTCAACAAGGCCGATGCCTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATACCGCACATTGAGAGGTCCCGATGTCCCTAGAGGGTGTGAAGGTCCTTGTAAGGTACAATCTTATGAGCAGCGACATGATGTGTCTCATGTCGGTAAGGTAATGTGCATATCTGATATTACCCGTGGCAACGGTATAACCCACCGCGTTGGTAAACGTTTTTGTGTTAAGTCTGTATACATTTTAGGGAAGATATGGATGGACGAAAATATCAAGTTGAAGAACCATACGAACAGTGTCATGTTTTGGTTAGTCAGAGACCGTAGACCATATGGGACTCCTATGGATTTTGGACAAGTATTCAATATGTTCGACAATGAACCCAGTACTGCGACTGTTAAGAACGATTTACGTGATCGTTTTCAAGTGATGCACAAGTTTTATGGGAAAGTTACAGGTGGTCAATATGCTAGCAACGAGCAAGCGTTGGTTAAACGTTTTTGGAAGGTCAATAATTATGTTGTGTATAACCATCAAGAAGCAGGGAAATACGAGAATCACACTGAGAATGCATTATTGTTGTATATGGCATGTACACATGCATCTAACCCTGTGTATGCTACCTTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAATAATATTTGAATTTTATTTCATGATTTTCTAATACAGCATTTACATAACGTTTATCTGTTGCGAAACGAACAGCTCTTACAACATTATTAATACCAACAAGTCCTATTCTATCTAAATACAACATAACCAAATACTTAAATCTGTTCAAATAAGTCGTTCCGGAAGCTTGAACTGACGTCGTCCAGATTTGGAAATTCAGGAAAGCTTTGTGTAGATTCAGTGCTTTCCTTATGTTGTAATTGAACCGGATTTGGATGTGGTAAATTCTCGTCCTTGTGTATATTGGATCCTCTATCCTGTATATCTTGAAATAGAGGGGATTTGGAACTTCCCAGATAAAAACGGAATTCTCTGCTTGAGTTACAGTGATGAATTCCCCTGTGCGTGAATCCATTATCCGCGCAATTGATGTGTATAAATATGGAACAGCCGCAGTTCAGGTCTATTCTTCGTCTACGAACTGCTTTTTTCTTAGCAATCCTGTGTTGTGCTTTGATAGAGGGGGGTGTTGAGGAAGATGAATTTAGCATTCTGTAATGTCCAATGCTTTAGTGATGCGTTTTCCTCTTTGTCGAGGTAATCTTTATAACTGGCCCCCTCTCCTGGATTGCACAACACGATTGACGGTATCCCGCCTTTAATTTGAACTGGCTTTCCATATTTGCAGTTTGATTGCCAGTTTTTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAGGTAATGCGGACTGATGTCATCAATGACGTTATAGACAGCCTCGTTAGAGTACACTGAAGAATTGAAATCAAGGTGTCCACTGAGGTAATTATGAACGCCTAATGCACGAGCCCACATGGTTTTTCCGGTGCGTGAGTCACCTTCAACTATGATACTAATCGGTCTATCTGCCCGCGCAGCGGCATCTTTTCCGAAATAATCATGAACCCATTGCTGCATCTCATCTGGAACCGACGTGAAGGAAGAGAGTTGAAACGGAGGAACCCATGGTTCTGGAGCCTTTTGAAATAAGCGCTCGATGTTAGTCCTCACGTTGTGGTAGTTGACGATGAATGTCTTTGGATCTCCGACTCTGATAATGTCGAGCGCTTCTTTTACACTACCCGCATTTATTGCGTTATGGTAGACGTCGTCTTTGTTCGATTTTGTTGCCCCAGACACTTTGTACTGCCCGGATTCACAATAATCACCCTCTTTGGTGATGTAATTCTTGACTGCATTTGAATCTTTGGCTGCTTGAATGTTTGGGTGAAAACGGGTAGACCTTCTGGGGTGAGTGATGTCGAAAAATCTAGCATCCTTGATGCTGGGCTTACCGGATAGTTGAATGAGACAGTGGAGATGTGGGAATCCATCTGCATGTTCCTCTCTGGAAACTCGTATGTATGTCGGTTTGACGACTGACCACGAGAGACTCTGAAGCATCTGAAGAGCATCATCTTTGTTTATGTCACACTGAGGATATGTTAAGAATATGTTTCTAGCTTGTATACGAAAAGCAGAAGGTTTCGGTGGCATACTTGTAAATATGAGAGGGTCTCCACCCGGAGTCCTCACTAAAACCTATTGTTTGTGGAGATTTGGAGACCCATATATATGAATACGTTCTACAACCCTCTTAGGGTCTCCAAGGGGCAATTTCGGCCATCCGCAATAATATT
Gene Information
|
NCBI Accession
|
YP_009506558.1
|
|
Location
|
188-937 |
|
Gene Name
|
AV1 |
|
Protein Name
|
CP |
|
Coding Region
|
ATGCCTAAGCGGGATGCCCCATGGCGTAACATGGCGGGGACCTCAAAGGTTACCCGTTCGAGTAATTATTCTCCTCGTGGTGGTCCTAAATTCAACAAGGCCGATGCCTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATACCGCACATTGAGAGGTCCCGATGTCCCTAGAGGGTGTGAAGGTCCTTGTAAGGTACAATCTTATGAGCAGCGACATGATGTGTCTCATGTCGGTAAGGTAATGTGCATATCTGATATTACCCGTGGCAACGGTATAACCCACCGCGTTGGTAAACGTTTTTGTGTTAAGTCTGTATACATTTTAGGGAAGATATGGATGGACGAAAATATCAAGTTGAAGAACCATACGAACAGTGTCATGTTTTGGTTAGTCAGAGACCGTAGACCATATGGGACTCCTATGGATTTTGGACAAGTATTCAATATGTTCGACAATGAACCCAGTACTGCGACTGTTAAGAACGATTTACGTGATCGTTTTCAAGTGATGCACAAGTTTTATGGGAAAGTTACAGGTGGTCAATATGCTAGCAACGAGCAAGCGTTGGTTAAACGTTTTTGGAAGGTCAATAATTATGTTGTGTATAACCATCAAGAAGCAGGGAAATACGAGAATCACACTGAGAATGCATTATTGTTGTATATGGCATGTACACATGCATCTAACCCTGTGTATGCTACCTTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAA |
|
Protein Sequence
|
MPKRDAPWRNMAGTSKVTRSSNYSPRGGPKFNKADAWVNRPMYRKPRIYRTLRGPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCISDITRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
|
NCBI Accession
|
YP_009506559.1
|
|
Location
|
934-1332 |
|
Gene Name
|
AC3 |
|
Protein Name
|
REn |
|
Coding Region
|
ATGGATTCACGCACAGGGGAATTCATCACTGTAACTCAAGCAGAGAATTCCGTTTTTATCTGGGAAGTTCCAAATCCCCTCTATTTCAAGATATACAGGATAGAGGATCCAATATACACAAGGACGAGAATTTACCACATCCAAATCCGGTTCAATTACAACATAAGGAAAGCACTGAATCTACACAAAGCTTTCCTGAATTTCCAAATCTGGACGACGTCAGTTCAAGCTTCCGGAACGACTTATTTGAACAGATTTAAGTATTTGGTTATGTTGTATTTAGATAGAATAGGACTTGTTGGTATTAATAATGTTGTAAGAGCTGTTCGTTTCGCAACAGATAAACGTTATGTAAATGCTGTATTAGAAAATCATGAAATAAAATTCAAATATTATTAA |
|
Protein Sequence
|
MDSRTGEFITVTQAENSVFIWEVPNPLYFKIYRIEDPIYTRTRIYHIQIRFNYNIRKALNLHKAFLNFQIWTTSVQASGTTYLNRFKYLVMLYLDRIGLVGINNVVRAVRFATDKRYVNAVLENHEIKFKYY |
|
NCBI Accession
|
YP_009506560.1
|
|
Location
|
1073-1468 |
|
Gene Name
|
AC2 |
|
Protein Name
|
TrAP |
|
Coding Region
|
ATGCTAAATTCATCTTCCTCAACACCCCCCTCTATCAAAGCACAACACAGGATTGCTAAGAAAAAAGCAGTTCGTAGACGAAGAATAGACCTGAACTGCGGCTGTTCCATATTTATACACATCAATTGCGCGGATAATGGATTCACGCACAGGGGAATTCATCACTGTAACTCAAGCAGAGAATTCCGTTTTTATCTGGGAAGTTCCAAATCCCCTCTATTTCAAGATATACAGGATAGAGGATCCAATATACACAAGGACGAGAATTTACCACATCCAAATCCGGTTCAATTACAACATAAGGAAAGCACTGAATCTACACAAAGCTTTCCTGAATTTCCAAATCTGGACGACGTCAGTTCAAGCTTCCGGAACGACTTATTTGAACAGATTTAA |
|
Protein Sequence
|
MLNSSSSTPPSIKAQHRIAKKKAVRRRRIDLNCGCSIFIHINCADNGFTHRGIHHCNSSREFRFYLGSSKSPLFQDIQDRGSNIHKDENLPHPNPVQLQHKESTESTQSFPEFPNLDDVSSSFRNDLFEQI |
|
NCBI Accession
|
YP_009506561.1
|
|
Location
|
1410-2459 |
|
Gene Name
|
AC1 |
|
Protein Name
|
replication protein |
|
Coding Region
|
ATGCCACCGAAACCTTCTGCTTTTCGTATACAAGCTAGAAACATATTCTTAACATATCCTCAGTGTGACATAAACAAAGATGATGCTCTTCAGATGCTTCAGAGTCTCTCGTGGTCAGTCGTCAAACCGACATACATACGAGTTTCCAGAGAGGAACATGCAGATGGATTCCCACATCTCCACTGTCTCATTCAACTATCCGGTAAGCCCAGCATCAAGGATGCTAGATTTTTCGACATCACTCACCCCAGAAGGTCTACCCGTTTTCACCCAAACATTCAAGCAGCCAAAGATTCAAATGCAGTCAAGAATTACATCACCAAAGAGGGTGATTATTGTGAATCCGGGCAGTACAAAGTGTCTGGGGCAACAAAATCGAACAAAGACGACGTCTACCATAACGCAATAAATGCGGGTAGTGTAAAAGAAGCGCTCGACATTATCAGAGTCGGAGATCCAAAGACATTCATCGTCAACTACCACAACGTGAGGACTAACATCGAGCGCTTATTTCAAAAGGCTCCAGAACCATGGGTTCCTCCGTTTCAACTCTCTTCCTTCACGTCGGTTCCAGATGAGATGCAGCAATGGGTTCATGATTATTTCGGAAAAGATGCCGCTGCGCGGGCAGATAGACCGATTAGTATCATAGTTGAAGGTGACTCACGCACCGGAAAAACCATGTGGGCTCGTGCATTAGGCGTTCATAATTACCTCAGTGGACACCTTGATTTCAATTCTTCAGTGTACTCTAACGAGGCTGTCTATAACGTCATTGATGACATCAGTCCGCATTACCTAAAGCTAAAGCACTGGAAAGAATTGATTGGGGCCCAAAAAAACTGGCAATCAAACTGCAAATATGGAAAGCCAGTTCAAATTAAAGGCGGGATACCGTCAATCGTGTTGTGCAATCCAGGAGAGGGGGCCAGTTATAAAGATTACCTCGACAAAGAGGAAAACGCATCACTAAAGCATTGGACATTACAGAATGCTAAATTCATCTTCCTCAACACCCCCCTCTATCAAAGCACAACACAGGATTGCTAA |
|
Protein Sequence
|
MPPKPSAFRIQARNIFLTYPQCDINKDDALQMLQSLSWSVVKPTYIRVSREEHADGFPHLHCLIQLSGKPSIKDARFFDITHPRRSTRFHPNIQAAKDSNAVKNYITKEGDYCESGQYKVSGATKSNKDDVYHNAINAGSVKEALDIIRVGDPKTFIVNYHNVRTNIERLFQKAPEPWVPPFQLSSFTSVPDEMQQWVHDYFGKDAAARADRPISIIVEGDSRTGKTMWARALGVHNYLSGHLDFNSSVYSNEAVYNVIDDISPHYLKLKHWKELIGAQKNWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDYLDKEENASLKHWTLQNAKFIFLNTPLYQSTTQDC |
|
NCBI Accession
|
YP_009506562.1
|
|
Location
|
2051-2380 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGATGCTCTTCAGATGCTTCAGAGTCTCTCGTGGTCAGTCGTCAAACCGACATACATACGAGTTTCCAGAGAGGAACATGCAGATGGATTCCCACATCTCCACTGTCTCATTCAACTATCCGGTAAGCCCAGCATCAAGGATGCTAGATTTTTCGACATCACTCACCCCAGAAGGTCTACCCGTTTTCACCCAAACATTCAAGCAGCCAAAGATTCAAATGCAGTCAAGAATTACATCACCAAAGAGGGTGATTATTGTGAATCCGGGCAGTACAAAGTGTCTGGGGCAACAAAATCGAACAAAGACGACGTCTACCATAACGCAATAA |
|
Protein Sequence
|
MMLFRCFRVSRGQSSNRHTYEFPERNMQMDSHISTVSFNYPVSPASRMLDFSTSLTPEGLPVFTQTFKQPKIQMQSRITSPKRVIIVNPGSTKCLGQQNRTKTTSTITQ |