Vernonia yellow vein Fujian virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_004786915.1 |
| Isolate |
China: Fujian |
| Release date |
2019/6/28 |
| Submitter |
Zulfiqar,A., Zhang,J., Cui,X., Qian,Y., Zhou,X., Xie,Y. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGATTTTTTTTTTGGGCCCCACCACGTGCGCTATCCTCCAATCATATTCCTCCCTCAAACGTTAGATAAAAAATGGTCCCCTATAAAGATTGGTCCCTACGTTTTTACAGTAAAAATGTGGGATCCACTTTTGAACGAATTCCCAGAGAGCGTACATGGCTTTCGTTGTATGCTTGCAATAAAGTATTTACAAGCTGTAGAGGATACGTATTCTCCTGATACTTTGGGATACGATCTTTTACGTGATTTAATATCCGTAGTTAGGGCTCGTGATTATGTCGAAGCGAGCAGGAGATATAGTCATTTCCACTCCCGTCTCCAAAGTTCGTCGCCGTCTGAACTTCGACAGCCCATACAGTCGCCGTGTTGCTGTCCCCACTGTCCGCGTCACCAAAAGGGATATGTGGACCAACAGGCCCATGTACCGAAAGCCCAAGATTTACAAAATAAAGAGAAGTAAGGACGTTCCTGCTGGTTGTGAAGGCCCATGTAAAGTCCAGTCATTTGAGCAGAGGCATGACATATCCCACACTGGGAAGGTTATTTGTGTTTCGGATGTTACCAGGGGAAATGGTATAACCCATAGGGTAGGTAAACGTTTTTGTATTAAGTCATTGTATGTTTTAGGTAAGGTATGGATGGACGAGAACATTAAGGTTAAAAACCATACTAATACTGTAATGTTTTATCTAGTTAGGGATAGACGTCCATTTGGTTCTCCAATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTACTGCTACTATTAAGAACGATCTTAGGGATCGTTACCAGGTTATTAGGAGGTTTTGGACCACAGTTACTGGCGGTCAGTATGCAAGCAAAGAACAGGCTATGGTGAACAAGTTTATGAGGGTGTACAATCGTGTCGTCTACAACCATCAGGAGGCTGCCAAATATGAGAATCATACGGAGAATGCTTTGTTATTGTATATGGCATGTACTCATAATGCAAATCCTGTGTATGCTACTCTTAAAATTCGGATCTATTTTTATGATTCGATAACTAATTAATAAACATTGAATTTTATTATTTCAAACTGTTGTACATAAGTTGTGTGATTCAATACATTGTGAAGTACATGATCTACTGCTTTAATTACAAGATTAATTGAAATTACACCTAAACTATCCAAGTATTTCAATACTTGAGTCTTAAATACTCTTAAGAAATGCGATGTCGCTGGTTGTAAACGAGTCCAGATCCTGAATGTCAAGAAACACATTCGAAGTCCCAACGCTTTCCTCAGGTTGTAGTTGAACTGGATCCTCATTTCGATGATGTCTCTGCCCATCAGGAATGGTCTTTTGTGGTGGTTTAGGATCTTGAAATATAGGGGATTTGGTACCTCCCAGATATATACGCCATTCGTCGCTTGAGCTGCAGTGATGGGTTCCCCTGTGTGTGAATCCATGGTTGTGACAGTTGATTGACCTGTAGTATGTGCATCCACAGGGTAGGTCTATCCTCTTCCTTCTTATTGGTTTCCTTTTTGCAGCCCTATGTAGGACTTTGATCGGTACTGGTGTACAACGGCTCGTTGAGGGTGACGAAGGTTGCATTCTTAGACGACCAGTCTTTTAATGCTTTATTTTTTTCTTCGTCTAGGTATTCTTTATAGGAAGAGGTTGGGCCTGGATTACACAGGAAGATTGTTGGTATCCCACCTTTAATTTGAATGGGCTTACCGTATTTCGTGTTGCTCTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTGTAGTGTTTTAGGTAGTGGGGGTCAACGTCGTCAATGACATTGAACCAGGCTTCATTGCTGTACACCTTTGGGCTTAGGTCTAGGTGTCCACACAAGTAATTGTGTGGGCCTAATGATCTGGCCCACATCGTCTTCCCTGTTCTGCTTTCCCCTTCAACCACTAAACTTATTGGTCTTAGTGGCCGCAGGCCGGCGTCGGCTATATTTTCCGATGCCCATTCTTCCATTATTTCCGGTACATTATTAAATGTTGAACATAAAAAAGGCGAAACATAAACCTCCATTGGAGGTGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAATACAAAATCTTTGGGAGCTTTCTCCCTCAGTATATTGAGGGCCGCAGCTTTGGACCCTGAGTTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTTCCATCGACCTGGAAAACTCCATGATCAAGGATGTCTCCGTCTTTCTCCATGTAGGCTTTGACGTCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAAGTGAGGTCGAAGAATCGATTGTTTTTGCATTGGAATTTGCCTTCGAATTGGATGAGGACATGAAGGTGAGGATTCCCATCTTCGTGTAGTTCTCTACAGATCCTGATGAATAGTTTGTTGGTTGGGGTTTCTAGGGCTTGTAATTGTGAAAGTGCCTCTTCTTTTGTTAATGAACAGTGTGGGTATGTGAGGAAATAATTTTTGGCATTTATTCGGAATTTATTAGGAGGTGCCATTGACTGGTCAATCGGTGTCTCTCAAACTTGGCTATGCAATTGGTGTCTGGGGTCTTATTTATACATGGACACCAAATGGCATTAATGTAATTTCTGAAAGAAATTCAAAATTCAAATTGGTAAAGCGGCCATCCGTCTAATATT
Gene Information
|
NCBI Accession
|
YP_009666345.1
|
|
Location
|
128-472 |
|
Gene Name
|
AV2 |
|
Protein Name
|
AV2 protein |
|
Coding Region
|
ATGTGGGATCCACTTTTGAACGAATTCCCAGAGAGCGTACATGGCTTTCGTTGTATGCTTGCAATAAAGTATTTACAAGCTGTAGAGGATACGTATTCTCCTGATACTTTGGGATACGATCTTTTACGTGATTTAATATCCGTAGTTAGGGCTCGTGATTATGTCGAAGCGAGCAGGAGATATAGTCATTTCCACTCCCGTCTCCAAAGTTCGTCGCCGTCTGAACTTCGACAGCCCATACAGTCGCCGTGTTGCTGTCCCCACTGTCCGCGTCACCAAAAGGGATATGTGGACCAACAGGCCCATGTACCGAAAGCCCAAGATTTACAAAATAAAGAGAAGTAA |
|
Protein Sequence
|
MWDPLLNEFPESVHGFRCMLAIKYLQAVEDTYSPDTLGYDLLRDLISVVRARDYVEASRRYSHFHSRLQSSSPSELRQPIQSPCCCPHCPRHQKGYVDQQAHVPKAQDLQNKEK |
|
NCBI Accession
|
YP_009666346.1
|
|
Location
|
288-1058 |
|
Gene Name
|
AV1 |
|
Protein Name
|
AV1 protein |
|
Coding Region
|
ATGTCGAAGCGAGCAGGAGATATAGTCATTTCCACTCCCGTCTCCAAAGTTCGTCGCCGTCTGAACTTCGACAGCCCATACAGTCGCCGTGTTGCTGTCCCCACTGTCCGCGTCACCAAAAGGGATATGTGGACCAACAGGCCCATGTACCGAAAGCCCAAGATTTACAAAATAAAGAGAAGTAAGGACGTTCCTGCTGGTTGTGAAGGCCCATGTAAAGTCCAGTCATTTGAGCAGAGGCATGACATATCCCACACTGGGAAGGTTATTTGTGTTTCGGATGTTACCAGGGGAAATGGTATAACCCATAGGGTAGGTAAACGTTTTTGTATTAAGTCATTGTATGTTTTAGGTAAGGTATGGATGGACGAGAACATTAAGGTTAAAAACCATACTAATACTGTAATGTTTTATCTAGTTAGGGATAGACGTCCATTTGGTTCTCCAATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTACTGCTACTATTAAGAACGATCTTAGGGATCGTTACCAGGTTATTAGGAGGTTTTGGACCACAGTTACTGGCGGTCAGTATGCAAGCAAAGAACAGGCTATGGTGAACAAGTTTATGAGGGTGTACAATCGTGTCGTCTACAACCATCAGGAGGCTGCCAAATATGAGAATCATACGGAGAATGCTTTGTTATTGTATATGGCATGTACTCATAATGCAAATCCTGTGTATGCTACTCTTAAAATTCGGATCTATTTTTATGATTCGATAACTAATTAA |
|
Protein Sequence
|
MSKRAGDIVISTPVSKVRRRLNFDSPYSRRVAVPTVRVTKRDMWTNRPMYRKPKIYKIKRSKDVPAGCEGPCKVQSFEQRHDISHTGKVICVSDVTRGNGITHRVGKRFCIKSLYVLGKVWMDENIKVKNHTNTVMFYLVRDRRPFGSPMDFGQVFNMYDNEPSTATIKNDLRDRYQVIRRFWTTVTGGQYASKEQAMVNKFMRVYNRVVYNHQEAAKYENHTENALLLYMACTHNANPVYATLKIRIYFYDSITN |
|
NCBI Accession
|
YP_009666347.1
|
|
Location
|
1055-1459 |
|
Gene Name
|
AC3 |
|
Protein Name
|
AC3 protein |
|
Coding Region
|
ATGGATTCACACACAGGGGAACCCATCACTGCAGCTCAAGCGACGAATGGCGTATATATCTGGGAGGTACCAAATCCCCTATATTTCAAGATCCTAAACCACCACAAAAGACCATTCCTGATGGGCAGAGACATCATCGAAATGAGGATCCAGTTCAACTACAACCTGAGGAAAGCGTTGGGACTTCGAATGTGTTTCTTGACATTCAGGATCTGGACTCGTTTACAACCAGCGACATCGCATTTCTTAAGAGTATTTAAGACTCAAGTATTGAAATACTTGGATAGTTTAGGTGTAATTTCAATTAATCTTGTAATTAAAGCAGTAGATCATGTACTTCACAATGTATTGAATCACACAACTTATGTACAACAGTTTGAAATAATAAAATTCAATGTTTATTAA |
|
Protein Sequence
|
MDSHTGEPITAAQATNGVYIWEVPNPLYFKILNHHKRPFLMGRDIIEMRIQFNYNLRKALGLRMCFLTFRIWTRLQPATSHFLRVFKTQVLKYLDSLGVISINLVIKAVDHVLHNVLNHTTYVQQFEIIKFNVY |
|
NCBI Accession
|
YP_009666348.1
|
|
Location
|
1200-1607 |
|
Gene Name
|
AC2 |
|
Protein Name
|
AC2 protein |
|
Coding Region
|
ATGCAACCTTCGTCACCCTCAACGAGCCGTTGTACACCAGTACCGATCAAAGTCCTACATAGGGCTGCAAAAAGGAAACCAATAAGAAGGAAGAGGATAGACCTACCCTGTGGATGCACATACTACAGGTCAATCAACTGTCACAACCATGGATTCACACACAGGGGAACCCATCACTGCAGCTCAAGCGACGAATGGCGTATATATCTGGGAGGTACCAAATCCCCTATATTTCAAGATCCTAAACCACCACAAAAGACCATTCCTGATGGGCAGAGACATCATCGAAATGAGGATCCAGTTCAACTACAACCTGAGGAAAGCGTTGGGACTTCGAATGTGTTTCTTGACATTCAGGATCTGGACTCGTTTACAACCAGCGACATCGCATTTCTTAAGAGTATTTAA |
|
Protein Sequence
|
MQPSSPSTSRCTPVPIKVLHRAAKRKPIRRKRIDLPCGCTYYRSINCHNHGFTHRGTHHCSSSDEWRIYLGGTKSPIFQDPKPPQKTIPDGQRHHRNEDPVQLQPEESVGTSNVFLDIQDLDSFTTSDIAFLKSI |
|
NCBI Accession
|
YP_009666349.1
|
|
Location
|
1546-2595 |
|
Gene Name
|
AC1 |
|
Protein Name
|
AC1 protein |
|
Coding Region
|
ATGGCACCTCCTAATAAATTCCGAATAAATGCCAAAAATTATTTCCTCACATACCCACACTGTTCATTAACAAAAGAAGAGGCACTTTCACAATTACAAGCCCTAGAAACCCCAACCAACAAACTATTCATCAGGATCTGTAGAGAACTACACGAAGATGGGAATCCTCACCTTCATGTCCTCATCCAATTCGAAGGCAAATTCCAATGCAAAAACAATCGATTCTTCGACCTCACTTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGACGTCAAAGCCTACATGGAGAAAGACGGAGACATCCTTGATCATGGAGTTTTCCAGGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAACTCAGGGTCCAAAGCTGCGGCCCTCAATATACTGAGGGAGAAAGCTCCCAAAGATTTTGTATTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTACACCTCCAATGGAGGTTTATGTTTCGCCTTTTTTATGTTCAACATTTAATAATGTACCGGAAATAATGGAAGAATGGGCATCGGAAAATATAGCCGACGCCGGCCTGCGGCCACTAAGACCAATAAGTTTAGTGGTTGAAGGGGAAAGCAGAACAGGGAAGACGATGTGGGCCAGATCATTAGGCCCACACAATTACTTGTGTGGACACCTAGACCTAAGCCCAAAGGTGTACAGCAATGAAGCCTGGTTCAATGTCATTGACGACGTTGACCCCCACTACCTAAAACACTACAAAGAATTCATGGGGGCCCAAAGGGACTGGCAGAGCAACACGAAATACGGTAAGCCCATTCAAATTAAAGGTGGGATACCAACAATCTTCCTGTGTAATCCAGGCCCAACCTCTTCCTATAAAGAATACCTAGACGAAGAAAAAAATAAAGCATTAAAAGACTGGTCGTCTAAGAATGCAACCTTCGTCACCCTCAACGAGCCGTTGTACACCAGTACCGATCAAAGTCCTACATAG |
|
Protein Sequence
|
MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLQALETPTNKLFIRICRELHEDGNPHLHVLIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKAYMEKDGDILDHGVFQVDGRSARGGCQSANDAYAEAINSGSKAAALNILREKAPKDFVLQFHNLNSNLDRIFTPPMEVYVSPFLCSTFNNVPEIMEEWASENIADAGLRPLRPISLVVEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWFNVIDDVDPHYLKHYKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNKALKDWSSKNATFVTLNEPLYTSTDQSPT |
|
NCBI Accession
|
YP_009666350.1
|
|
Location
|
2145-2438 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGAATCCTCACCTTCATGTCCTCATCCAATTCGAAGGCAAATTCCAATGCAAAAACAATCGATTCTTCGACCTCACTTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGACGTCAAAGCCTACATGGAGAAAGACGGAGACATCCTTGATCATGGAGTTTTCCAGGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAACTCAGGGTCCAAAGCTGCGGCCCTCAATATACTGA |
|
Protein Sequence
|
MGILTFMSSSNSKANSNAKTIDSSTSLPQPGQHISIRTFRELKAQQTSKPTWRKTETSLIMEFSRSMEDQLEEVANLPTTHMPRQSTQGPKLRPSIY |