Verbena mottle virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018580625.1
Isolate Colombia
Release date 2021/6/1
Submitter Lopez-Lopez,K., Jara-Tejada,F., Arguello-Astorga,G.R., Vaca-Vaca,J.C.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055544
ACCGGATGGCCGCGCTTTTTTCCCCCCCTCCAGGTGGCGCGATCTCCCTCGCCTTCCTGGTGGTCCCATCCTCTTTAATTTGAATTATTGTCGCGCAGCGTTAGTCTCAGCCAATCATATTGCGCCTGACGAGCTTAGATATTTGTAACAACTTGGCGCCCAAGTTGTTAGTGCGTTATAAATTAAAGAGCCCTTGGTCCACTGCCTTTAACTCAAAATGCCTAAGCGGGATGCCCCGTGGCGCTTGTTGGCGGGAACCTCAAAGGTGAGCCGTAATGTCAATTATTCTCCTCGTGCAGGCAGTGGCCCAAAGTTAAACAGGGCCTCAGAATGGGTTAACAGGCCCATGTACAGAAAGCCCAGGATCTATCGAACGCTAAGGACTCCTGACGTGCCCAGAGGATGTGAAGGCCCGTGTAAGGTACAGTCCTACGAACAGCGCCATGACATTTCACATGTTGGCAAGGTAATGTGTATCTCTGATGTCACACGTGGTAATGGTATTACCCACCGTGTTGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTAGGGAAGATATGGATGGATGAAAATATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACTCCCATGGATTTTGGCCAGGTGTTTAACATGTTCGACAACGAGCCTAGCACTGCGACGGTGAAGAACGATCTCCGCGATCGTTTTCAGGTCATGCATAAGTTCTATGGGAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATAGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAAGAGGCTGGCAAATATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCTGTGTATGCAACGTTGAAGATTCGAATCTATTTTTACGATTCGATCACGAATTAATAAAATTTGAATTTTATTGAATGATTTTCCAGAACATAATTTACATACGATCTGGCTGTTGCGAAACGAACAGCTCTAATTACATTGTTAATTGAAATAACGCCTACCTGATCTAAATACATATTAACTAGATGTCTAAACCTATTCAAATAGGTCTGCCCAGAAGCTGTCATCGATATCGTCCAGACTTGGAAGTTCAGGTAGGCCTTGTGGAGATGCAACGCTTTCCTCAGGTTGTAATTGAACCGTATTTGTACGCTGTATATCCTCGTGTTCGTGTACAGTGGATCCTCTACTCTGTACAGTCTGAAATAGAGGGGATTTTCTATCTGCCAGATATACACGCCATTCTCCGCCTGATGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGCCCAGTGCAGCCTATGTGGAAGTAAATAGAGCAACCGCACTCCAGATCAATGCGGCGTCGTCTGACTGATCTCTTCTTGGCCTCCCTGTGTTGCTTCTTGATACAAGGGGGAGTTGAGGGTGATGAAGACCGCATTCTTCAAAGTCCAGTCCCTGAGTGCTGTGTTTTCCTGTTTGTCCAGGAAATCTTTATAGCTGGCACCCTCGCCAGAATTGCAGAGCACGATTGATGGTATCCCACCTTTAATCAGGACTGGCTTTCCGTACTTACAATTTGACTGCCACATCTGTTGGGCCCCGATTAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCATCAATGACGTTATATTCCACTTCGTCTGAGAAAACTCTGGAATTGAAGTCTAGGTGTCCACTCATGTAATTATGTGGGCCTAATGACCGAGCCCACATCGTCTTCCCTGTTCTTGAGTCACCTTCTACTATGAGACTGACTGGCCTCAATGGCCGCGCAGCGGCACTCCTTCCAAAATAGTCGTCTGCCCACTCTTGCATCTCGTCGGGCACGTTAGTGAAAGAGGATAGTGGAAACGGAGGAGACCATGGCTCCGGAGCCTTTTTGAAAATTCTGGATGCGTTAGCAACCAGGTTGTGATGCTGAAGGAAGAAGTGTTGCGGTTGTTCTTCCTTTATGATTTGCAGAGCTTCTTCGGCAGAGGTCGCATTTAACGCCTTGGCATATGTGTCGTTAATTGATTGCTGACCTCCTCTAGCAGATCTGCCGTCGATCTGGAACTTTCCCCATTCAATGGTGTCTCCGTCCTTGTTAATGTAGTACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAAGGTGCTGATCTTGATGGGGAAACCAGATCGAAGAATCTGTTATTCGTGCAGTTGTATTTCCCTTCGAATTGGATAAGCATGTGGAGATGGGGATTCCCATTTTCGTGAAATTCTCTGCAAATCTTGATGTACTTCTTGTTAACTGGGGTTTTCAGAGCTAGAATTTGGGAAAGTGCCTCTTCTTTTGTTAGAGAGCACTCTGGATAAGTGATGAAATAGTTTTTGGCTTTAACTGAGAATGAACCCTTTCGTGGCATTTTTGTAATAATTGATGTACCCCCAATTGCTCAGCTCTCTCAACTCTGCTGTATAATTGGGGGAACTGGGGGTACATATATACTATATCCTTCTAAGGGGATTTTCGGCCATCCGCTATAATATT

Gene Information

NCBI Accession YP_010087342.1
Location 218-973
Gene Name AR1
Protein Name coat protein
Coding Region ATGCCTAAGCGGGATGCCCCGTGGCGCTTGTTGGCGGGAACCTCAAAGGTGAGCCGTAATGTCAATTATTCTCCTCGTGCAGGCAGTGGCCCAAAGTTAAACAGGGCCTCAGAATGGGTTAACAGGCCCATGTACAGAAAGCCCAGGATCTATCGAACGCTAAGGACTCCTGACGTGCCCAGAGGATGTGAAGGCCCGTGTAAGGTACAGTCCTACGAACAGCGCCATGACATTTCACATGTTGGCAAGGTAATGTGTATCTCTGATGTCACACGTGGTAATGGTATTACCCACCGTGTTGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTAGGGAAGATATGGATGGATGAAAATATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACTCCCATGGATTTTGGCCAGGTGTTTAACATGTTCGACAACGAGCCTAGCACTGCGACGGTGAAGAACGATCTCCGCGATCGTTTTCAGGTCATGCATAAGTTCTATGGGAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATAGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAAGAGGCTGGCAAATATGAGAATCACACTGAGAACGCTTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCTGTGTATGCAACGTTGAAGATTCGAATCTATTTTTACGATTCGATCACGAATTAA
Protein Sequence MPKRDAPWRLLAGTSKVSRNVNYSPRAGSGPKLNRASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN

NCBI Accession YP_010087343.1
Location 970-1368
Gene Name AL3
Protein Name replication enhancement protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCGGAGAATGGCGTGTATATCTGGCAGATAGAAAATCCCCTCTATTTCAGACTGTACAGAGTAGAGGATCCACTGTACACGAACACGAGGATATACAGCGTACAAATACGGTTCAATTACAACCTGAGGAAAGCGTTGCATCTCCACAAGGCCTACCTGAACTTCCAAGTCTGGACGATATCGATGACAGCTTCTGGGCAGACCTATTTGAATAGGTTTAGACATCTAGTTAATATGTATTTAGATCAGGTAGGCGTTATTTCAATTAACAATGTAATTAGAGCTGTTCGTTTCGCAACAGCCAGATCGTATGTAAATTATGTTCTGGAAAATCATTCAATAAAATTCAAATTTTATTAA
Protein Sequence MDSRTGELITAHQAENGVYIWQIENPLYFRLYRVEDPLYTNTRIYSVQIRFNYNLRKALHLHKAYLNFQVWTISMTASGQTYLNRFRHLVNMYLDQVGVISINNVIRAVRFATARSYVNYVLENHSIKFKFY

NCBI Accession YP_010087344.1
Location 1115-1504
Gene Name AL2
Protein Name transactivator protein
Coding Region ATGCGGTCTTCATCACCCTCAACTCCCCCTTGTATCAAGAAGCAACACAGGGAGGCCAAGAAGAGATCAGTCAGACGACGCCGCATTGATCTGGAGTGCGGTTGCTCTATTTACTTCCACATAGGCTGCACTGGGCATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCGGAGAATGGCGTGTATATCTGGCAGATAGAAAATCCCCTCTATTTCAGACTGTACAGAGTAGAGGATCCACTGTACACGAACACGAGGATATACAGCGTACAAATACGGTTCAATTACAACCTGAGGAAAGCGTTGCATCTCCACAAGGCCTACCTGAACTTCCAAGTCTGGACGATATCGATGACAGCTTCTGGGCAGACCTATTTGAATAG
Protein Sequence MRSSSPSTPPCIKKQHREAKKRSVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGGEWRVYLADRKSPLFQTVQSRGSTVHEHEDIQRTNTVQLQPEESVASPQGLPELPSLDDIDDSFWADLFE

NCBI Accession YP_010087345.1
Location 1416-2501
Gene Name AL1
Protein Name replication associated protein
Coding Region ATGCCACGAAAGGGTTCATTCTCAGTTAAAGCCAAAAACTATTTCATCACTTATCCAGAGTGCTCTCTAACAAAAGAAGAGGCACTTTCCCAAATTCTAGCTCTGAAAACCCCAGTTAACAAGAAGTACATCAAGATTTGCAGAGAATTTCACGAAAATGGGAATCCCCATCTCCACATGCTTATCCAATTCGAAGGGAAATACAACTGCACGAATAACAGATTCTTCGATCTGGTTTCCCCATCAAGATCAGCACCTTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTACTACATTAACAAGGACGGAGACACCATTGAATGGGGAAAGTTCCAGATCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCAATTAACGACACATATGCCAAGGCGTTAAATGCGACCTCTGCCGAAGAAGCTCTGCAAATCATAAAGGAAGAACAACCGCAACACTTCTTCCTTCAGCATCACAACCTGGTTGCTAACGCATCCAGAATTTTCAAAAAGGCTCCGGAGCCATGGTCTCCTCCGTTTCCACTATCCTCTTTCACTAACGTGCCCGACGAGATGCAAGAGTGGGCAGACGACTATTTTGGAAGGAGTGCCGCTGCGCGGCCATTGAGGCCAGTCAGTCTCATAGTAGAAGGTGACTCAAGAACAGGGAAGACGATGTGGGCTCGGTCATTAGGCCCACATAATTACATGAGTGGACACCTAGACTTCAATTCCAGAGTTTTCTCAGACGAAGTGGAATATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAATTAATCGGGGCCCAACAGATGTGGCAGTCAAATTGTAAGTACGGAAAGCCAGTCCTGATTAAAGGTGGGATACCATCAATCGTGCTCTGCAATTCTGGCGAGGGTGCCAGCTATAAAGATTTCCTGGACAAACAGGAAAACACAGCACTCAGGGACTGGACTTTGAAGAATGCGGTCTTCATCACCCTCAACTCCCCCTTGTATCAAGAAGCAACACAGGGAGGCCAAGAAGAGATCAGTCAGACGACGCCGCATTGA
Protein Sequence MPRKGSFSVKAKNYFITYPECSLTKEEALSQILALKTPVNKKYIKICREFHENGNPHLHMLIQFEGKYNCTNNRFFDLVSPSRSAPFHPNIQGAKSSSDVKYYINKDGDTIEWGKFQIDGRSARGGQQSINDTYAKALNATSAEEALQIIKEEQPQHFFLQHHNLVANASRIFKKAPEPWSPPFPLSSFTNVPDEMQEWADDYFGRSAAARPLRPVSLIVEGDSRTGKTMWARSLGPHNYMSGHLDFNSRVFSDEVEYNVIDDVAPHYLKLKHWKELIGAQQMWQSNCKYGKPVLIKGGIPSIVLCNSGEGASYKDFLDKQENTALRDWTLKNAVFITLNSPLYQEATQGGQEEISQTTPH

References More References in PubMed

1

Complete genome sequence of arracacha mottle virus.

Orílio AF, et al.  Arch Virol. 2013 Jan;158(1):291-5. doi: 10.1007/s00705-012-1473-x. Epub 2012 Sep 22.

PMID: 23001696

2

Bidens mottle virus Identified in Tropical Soda Apple in Florida.

Baker CA, et al.  Plant Dis. 2007 Jul;91(7):905. doi: 10.1094/PDIS-91-7-0905A.

PMID: 30780404

3

Natural Infection of Vicia faba by Bidens mottle virus in Florida.

Baker CA, et al.  Plant Dis. 2001 Dec;85(12):1290. doi: 10.1094/PDIS.2001.85.12.1290C.

PMID: 30831812

4

Natural Infection of Verbena and Phlox by a Recently Described Member of the Carmovirus Genus.

Assis Filho FM, et al.  Plant Dis. 2006 Aug;90(8):1115. doi: 10.1094/PD-90-1115B.

PMID: 30781336

5

Complete genome sequence of pepper yellow mosaic virus, a potyvirus, occurring in Brazil.

Lucinda N, et al.  Arch Virol. 2012 Jul;157(7):1397-401. doi: 10.1007/s00705-012-1313-z. Epub 2012 Apr 15.

PMID: 22527869

6

A New Potyvirus sp. Infects Verbena Exhibiting Leaf Mottling Symptoms.

Kraus J, et al.  Plant Dis. 2010 Sep;94(9):1132-1136. doi: 10.1094/PDIS-94-9-1132.

PMID: 30743723

7

First Report of Nemesia ring necrosis virus in North America in Ornamental Plants from California.

Mathews DM, et al.  Plant Dis. 2006 Sep;90(9):1263. doi: 10.1094/PD-90-1263C.

PMID: 30781122