Cassava mosaic Madagascar virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000895455.1
Isolate Madagascar:Toliary
Release date 2015/2/22
Submitter Harimalala,M.A., Lefeuvre,P., Hoareau,M., Villemot,J., Tiendrebeogo,F., Ranomenjanahary,S., Andrianjaka,A., Reynaud,B., Lett,J.M.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_017004
ACCGGATGGCCGCGCCCGAAAAAGTAAGTGGGCCCCACAATGGTCCCCACGCACTAATTTATGTCGACCAATCACATTGTGTCTGGGAAGACTACATAATTATAATGGTCTTTATATGCTTGTCCAACAAGTAGTTTTGCATTTCAAAATGTGGGATCCATTGTTAAATGAATTTCCTGACTCGGTTCATGGATTTCGTTGTATGCTAGCTATAAAATATTTGCAGGCTGTGGAGGTAACCTACGAGTCCAATACTTTGGGCCGCGATTTAATTCGGGATCTCATTTCTGTTATTAGGGCTCGTGACTATGTCGAAGCGTCCCGCCGATATAATAATTGCCACTCCCGCCTCGAAGGTGCGTCGGAAGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGTCCCAGGCACAAGCAAGTTCAAATCATGGAAGTTCAGACCCATGTATCGGAAGCCCAGGATGTACAGGATGTTCAAAAGCCCTGATGTTCCTCGTGGCTGTGAAGGCCCATGTAAGGTTCAATCATATGAACAGCGAGATGACGTCAAGCATACTGGCACTGTTCGTTGTGTGAGTGATGTCACGCGTGGTCCGGGAATTACGCATAGAGTGGGTAAAAGGTTTTGTATCAAGTCTATATATGTGTTAGGTAAGATATGGATGGATGAAAATATCAAGAAGCAGAACCATACTAACCAGGTCATGTTCTTCTTAGTCCGTGACAGAAGGCCCTATGGCACTAGCCCCATGGACTTTGGACAGGTTTTTAATATGTTTGATAATGAGCCCAGTACAGCAACTGTGAAGAACGATCTTAGGGATAGGTATCAAGTTATGCGGAAGTTTCATGCCACCGTTGTTGGGGGTCCTTCTGGGATGAAGGAGCAGCTTTGGTTAGGAGATTTTTTAGGATTAATAATCATGTGGTGTATAATCACCAGGAGGCAGCTAAGTATGAGAATCATACAGAGAATGCGTTATTGTTGTATATGGCATGTACGCATGCCTCTAATCCAGTGTATGCTACGCTTAAAATACGCATCTATTTTTATGATGCAGTAACAAATTAATACAAATTAAATTTTATTTCGTGGGACTCCATAACTTGGAGTGTGTTTACAAGTACATTGTACAATACGTGATCAACAGCGCGAATTACAGTGTTTATTGAAATAACGCCTACATTATCTAAATACTTAAGAACTTGACGCTTAAATACGCTTAAGAAATGACCAGTCTGAGGGTGTAAGGTCGTCCAGACCTGGAAGTTCAGAAAACATTTGTGAATCCCCAATTCCTTCCGGATGTTGTGGTTGAAGCGTATTTGGATGGTGATGATGTCGTGGTTCAGGTGGGACGGTCTCGAGTCGTGTCTGGGTATCGTGAAATAAAGGGGATTGTTTATCTCCCAGGTAAAAACGCCATTCTGCGCTTGAGGAGCAGTGATGAGTGCCCCTGTGCGTGAATCCATGATTGATGCAGTCGATGTGGAGATAATATGAACAGCCGCAGCTTAGGTCGATACGTCTACGTCTGATGCGTCTCGTCTTGGCTATGCGGTGTAGGACCTTGATGGGAACCTGTGAACAATGGCTCGCTGAGGGTGACGAAGGTTGCATTTTTCAGTGCCCACGCTTTGAGAGATGCATTCTTTTCTTCATCGAGATATTCTTTATATGAAGAAGTCGGCCCCGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATTGGCTTTCCGTATTTTGTGTTGCTTTGCCAGTCTCGTTGTGCACCCATGAACTCTTTAAAGTGCTTTAGATAGTGCGGATCGACATCATCAATAATGTTGTACCATGCATCATTAGTGAAGACTTTGGGACTGAGGTCGAGATGACCACATAAATAATTATGTGGTCCCAATGATCTGGCCCACATTGTCTTCCCTGTACGACTATCACCCTCAATAACAATACTATTCGGTCTCCAAGGCCGCGCAGCGGGATGCATAATGTTTTCTGACACCCAGACCTCAAGGTCGTCAGGAACTTGGTCGAATGAAGAAGACAGAAATGGAGAAACATAGGGAGCTGGTGGCTCTTGAAAAATCCTATCTAAATTACTACTTAAGTTATGATATTGAAAAATAAATTCTTTGGGGAGTTTCTCCTTAATAATTAGAAGTGCAGCTGCCTTCGAACGTGAGTTTAAGGCTTCGGCACATGCGTCATTAGCATTTTGGCAGCCGCCTCTAGCAGATCTTGCGTCGATCTGGAATTCGCCCCACTCAGTTGTATCCCCATCTTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTGGCTCCTTGAATGTTTGGATGGAAATGGGTTGACGTTGTTGGGGATACCAGGTCGAATAATCGCTTATTTGTGCATGAGAATTTGCCTTCGAATTGAATAAGCATGTGGAGATGAGGTTGCCCATCTTCGTGAAGTTCTCGGCACACTTTGATGTATTTCTTATTAGTTGGAGTTGGGATGTTTAAGATTTGGGATAATGCGTCGTGTTTAGATAGAGAGCATTTGGGATATGTGAGGAAATAGTTTTTGGCTTGTATTTTAAAACGCTTGGGAGGAGGCATTTATGCGAGAGCAATTGGAGACACCTTGGTTGATGTCTCTACTGAATTGGAGACAATATATAGTGTCTCCAAATGGCATTATGGTAATTAGTTAAAGCTATGTTCAAAATTCAAAAATTGGACCAAAAGCGGCCATCCGTATAATATT

NC_017005
ACCGGATGGCCGCGCCCGAAAAAGCATGTGGACCCCACAATAGCCCCCACGCACTAAGGAAAGCAGCCAATCAGGTTTTATACGTGAAGACTCGTTAGTAACTCATGGATGAGTAAGTGGTCCCTACCCACTAATTCTGACAGGCAATTGTATTGCTATTTGTGTATTATATTATTATAGGTGTGCTACGGGCCAATCTAAAGTTATGTTATGGGGCCTATCATAAAAAAGCAAAATATAGGTACCTATTCACATATTGATTATATGGTTATGTGCGGATATATGATCCGCCACGTGTTTACAAAGGATATGGATTGTCCTATAAATATTTTGCATATCTCGCCTTCGTTCATGCAAGATGTATTCTGTTAACAGACGTGGGTATAAGACTCCGTATAGGAGTCCGTATGTCGCTCGTGTAACACCATATGTTTATCGTAAGACGTCGTTTAAACATACGTCTAAATCTCGTGTACCTCGAAAGTTGGCGTATGAATCGCCAAAAGTGTTATATATGCGACGCTCAATGGAAGATGTCCATGATGGGGCTTCTTTGAAGTTGCCTCAACAGGGGGATCATACGTCCTACGTGACACTCCCGTGTCGTGGTATCGATGGTAATGGGGGTAGGTCTGTGGACCATATAAAATTATTAAGCTTGAGGGTTTCTGGGACCGTCAATGTCAGTCAATTCGGTGGTGATGACAATATGGGAGAGAAAACAACCATGATAGGTATCTTTTTCATGGCTTGTCTTGTTGATAAGAAACCTTTCGTTCCAGAGGGGGTCAGCACATTGCCGACGTTCAAGGAGTTGTTCGGGGAATATGAATCCGTGTATGGCATGCCTAGGTTGAAGGAAAACGTCCGTCACCGTTATCGCGTTATTGGGACGTCGAAATTATATATAACGACCGATGAAGATCACATCCAGAAGCCTTTTAGTATACGTCGAAGACTCAGTGGAGGGAAATATCCTATTTGGTCTTCGTTCAAGGATGTGGATAATAGTAGTACAGGTGGTAACTATAAAAATGTAAATAAGAACGCTATACTAGTTAGTTATGTGTGGGTATCGCTATGTCGGAGCACCTGTGATGTGTATTCTCAGTTTGTACTTAATTACGTCGGCTGATAATAAAATTATATAAGGGTTTTGACATTAATTATGATTGAACTAATGAAACATGCGATGAACATCAATGGGAAGCATATAGAGTTTTATTATGTTCCGAATCAAATATTGTACATATCAATTGTTTATTACAATTGCCGTGGGGCTTCGGATTTGATTTTGATGAGACACTTGTTTATGGTACTCTCCAGCAGGGTCTCGAGGTCCTTTCTGGATACTGAGTCGGATGGGGCCTGTGATACTGAGTCTCCTGGGTCTAACTCTGGTGTGTTTAATCTGTGTAGTCTCTGGTAAGGATATTCTGTGGACTCGTTGTCTAAGTCTGTTGGTGTTGTCGATGGGTCCATTCTCATGGACTGTGAACGAAAGTGTTCCAGCCGTGCTGGGTTTGATGAGCTGGGTAGCCCAATCTGAGACTTTGTGGCCCATGTTTCTCCAGGCATTATGGTAATGGGCCTAGTGGATATTGTTCTGTGGGTCTGAGCAGATGGATTTGGATTGAGGAGACGCCGTCTGGTTTCTCCACGTTCCACGGACCAAAAGTCTATGCATTCTTTTGTGAATCCCTTGGATCGTATGTTGATCGTAGGGGGCTTGAATCGTATGTCCGTGGAATGCTTGGCAGTCGATAATCTTAGTCTTGCCTTGATGGAGGCGAATTTGACCCCTTCTACGACGTTCGAGTCCTCGACTTTGTATATAATTTCCCATGGTGAGGGTTCTGACACTGAGAAGTAAGTGGAGGAGTAGTAATGGAGATCGACGTTACACGTTATCGGGAATGTGAAAGCAGCTTGTGCTGCGTCTTCGAGGCTCACGCGATTATCCCTGATCTCCACAATTACTGAGCCCGTTGCATTAAATGGGACTTGGTTATTGTATTCTATTATGATGTGATCGATCTTCATGCATCTGCCCTTAAGCCGCATGGTGGCCTGTTCGAATGAACTGGGAAATTGAAGATAAATCGGTGATGCGTCATTTGTCAGTGCATACTCGGTCCTTTTGGTGTCGATGTATCGGTTGTTGTCAACTGTATATGTGGCCTCCATCCTGTGTGGTTTGTGACAAATGACGTTATAAGTGAGAATGTATACATAAAATGCAGTAATAATTATGAGATTGGTCAAATCATATGAGCATACATGCAGTAACATGAACATGATGGTAAGAAAACATCAAGTATTTATAATAGGCCGCGCAGCGGGATGGCTTTGATGATATACCGTTAACTGGGCTGGAATAGATGCTACGCACCGCGATATAATCCTTTATACGTGATGTAGATGTCAGGGACGATAGAAGGAGGATATTGAACTGGCGTGTAACGATGGTAAGTAGATGTTGGTTTTATAGCGGATGAAGCAACTGCTGTGCGAGACGATGTCGTGTAAATAAGCCACGGAGCTTGCTATTGGTAGAGAGAGAAACTAGAGAGAAGCGAGAGCAATTGGAGACACCTCGGTTGAAGTCTCTTATGTATTGGAGACAATATATAGTGTCTCCAAATGGCATTGTCGTAATTAGTGACAGGTCCTTTACGCGTCATGTGGTCCCTACTGCGAATTTAAAGTCGAAAAAGTATTGCGGCCATCCGTCTAATATT

Gene Information

NCBI Accession YP_005352913.1
Location 116-499
Gene Name AV2
Protein Name AV2 protein (MP)
Coding Region ATGCTTGTCCAACAAGTAGTTTTGCATTTCAAAATGTGGGATCCATTGTTAAATGAATTTCCTGACTCGGTTCATGGATTTCGTTGTATGCTAGCTATAAAATATTTGCAGGCTGTGGAGGTAACCTACGAGTCCAATACTTTGGGCCGCGATTTAATTCGGGATCTCATTTCTGTTATTAGGGCTCGTGACTATGTCGAAGCGTCCCGCCGATATAATAATTGCCACTCCCGCCTCGAAGGTGCGTCGGAAGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGTCCCAGGCACAAGCAAGTTCAAATCATGGAAGTTCAGACCCATGTATCGGAAGCCCAGGATGTACAGGATGTTCAAAAGCCCTGA
Protein Sequence MLVQQVVLHFKMWDPLLNEFPDSVHGFRCMLAIKYLQAVEVTYESNTLGRDLIRDLISVIRARDYVEASRRYNNCHSRLEGASEAELRQPIQQPCCCPHCPRHKQVQIMEVQTHVSEAQDVQDVQKP

NCBI Accession YP_005352914.1
Location 309-1076
Gene Name AV1
Protein Name coat protein (CP)
Coding Region ATGTCGAAGCGTCCCGCCGATATAATAATTGCCACTCCCGCCTCGAAGGTGCGTCGGAAGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGTTGTCCCCATTGTCCCAGGCACAAGCAAGTTCAAATCATGGAAGTTCAGACCCATGTATCGGAAGCCCAGGATGTACAGGATGTTCAAAAGCCCTGATGTTCCTCGTGGCTGTGAAGGCCCATGTAAGGTTCAATCATATGAACAGCGAGATGACGTCAAGCATACTGGCACTGTTCGTTGTGTGAGTGATGTCACGCGTGGTCCGGGAATTACGCATAGAGTGGGTAAAAGGTTTTGTATCAAGTCTATATATGTGTTAGGTAAGATATGGATGGATGAAAATATCAAGAAGCAGAACCATACTAACCAGGTCATGTTCTTCTTAGTCCGTGACAGAAGGCCCTATGGCACTAGCCCCATGGACTTTGGACAGGTTTTTAATATGTTTGATAATGAGCCCAGTACAGCAACTGTGAAGAACGATCTTAGGGATAGGTATCAAGTTATGCGGAAGTTTCATGCCACCGTTGTTGGGGGTCCTTCTGGGATGAAGGAGCAGCTTTGGTTAGGAGATTTTTTAGGATTAATAATCATGTGGTGTATAATCACCAGGAGGCAGCTAAGTATGAGAATCATACAGAGAATGCGTTATTGTTGTATATGGCATGTACGCATGCCTCTAATCCAGTGTATGCTACGCTTAAAATACGCATCTATTTTTATGATGCAGTAA
Protein Sequence MSKRPADIIIATPASKVRRKLNFDSPYSSRAVVPIVPGTSKFKSWKFRPMYRKPRMYRMFKSPDVPRGCEGPCKVQSYEQRDDVKHTGTVRCVSDVTRGPGITHRVGKRFCIKSIYVLGKIWMDENIKKQNHTNQVMFFLVRDRRPYGTSPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMRKFHATVVGGPSGMKEQLWLGDFLGLIIMWCIITRRQLSMRIIQRMRYCCIWHVRMPLIQCMLRLKYASIFMMQ

NCBI Accession YP_005352915.1
Location 1081->1485
Gene Name AC3
Protein Name replication enhancer protein (REn)
Coding Region ATGGATTCACGCACAGGGGCACTCATCACTGCTCCTCAAGCGCAGAATGGCGTTTTTACCTGGGAGATAAACAATCCCCTTTATTTCACGATACCCAGACACGACTCGAGACCGTCCCACCTGAACCACGACATCATCACCATCCAAATACGCTTCAACCACAACATCCGGAAGGAATTGGGGATTCACAAATGTTTTCTGAACTTCCAGGTCTGGACGACCTTACACCCTCAGACTGGTCATTTCTTAAGCGTATTTAAGCGTCAAGTTCTTAAGTATTTAGATAATGTAGGCGTTATTTCAATAAACACTGTAATTCGCGCTGTTGATCACGTATTGTACAATGTACTTGTAAACACACTCCAAGTTATGGAGTCCCACGAAATAAAATTTAATTTGTATTAA
Protein Sequence MDSRTGALITAPQAQNGVFTWEINNPLYFTIPRHDSRPSHLNHDIITIQIRFNHNIRKELGIHKCFLNFQVWTTLHPQTGHFLSVFKRQVLKYLDNVGVISINTVIRAVDHVLYNVLVNTLQVMESHEIKFNLY

NCBI Accession YP_005352916.1
Location 1226->1633
Gene Name AC2
Protein Name transcription activator protein (TrAP)
Coding Region ATGCAACCTTCGTCACCCTCAGCGAGCCATTGTTCACAGGTTCCCATCAAGGTCCTACACCGCATAGCCAAGACGAGACGCATCAGACGTAGACGTATCGACCTAAGCTGCGGCTGTTCATATTATCTCCACATCGACTGCATCAATCATGGATTCACGCACAGGGGCACTCATCACTGCTCCTCAAGCGCAGAATGGCGTTTTTACCTGGGAGATAAACAATCCCCTTTATTTCACGATACCCAGACACGACTCGAGACCGTCCCACCTGAACCACGACATCATCACCATCCAAATACGCTTCAACCACAACATCCGGAAGGAATTGGGGATTCACAAATGTTTTCTGAACTTCCAGGTCTGGACGACCTTACACCCTCAGACTGGTCATTTCTTAAGCGTATTTAA
Protein Sequence MQPSSPSASHCSQVPIKVLHRIAKTRRIRRRRIDLSCGCSYYLHIDCINHGFTHRGTHHCSSSAEWRFYLGDKQSPLFHDTQTRLETVPPEPRHHHHPNTLQPQHPEGIGDSQMFSELPGLDDLTPSDWSFLKRI

NCBI Accession YP_005352917.1
Location <1543->2621
Gene Name AC1
Protein Name replication associated protein (Rep)
Coding Region ATGCCTCCTCCCAAGCGTTTTAAAATACAAGCCAAAAACTATTTCCTCACATATCCCAAATGCTCTCTATCTAAACACGACGCATTATCCCAAATCTTAAACATCCCAACTCCAACTAATAAGAAATACATCAAAGTGTGCCGAGAACTTCACGAAGATGGGCAACCTCATCTCCACATGCTTATTCAATTCGAAGGCAAATTCTCATGCACAAATAAGCGATTATTCGACCTGGTATCCCCAACAACGTCAACCCATTTCCATCCAAACATTCAAGGAGCCAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAAGATGGGGATACAACTGAGTGGGGCGAATTCCAGATCGACGCAAGATCTGCTAGAGGCGGCTGCCAAAATGCTAATGACGCATGTGCCGAAGCCTTAAACTCACGTTCGAAGGCAGCTGCACTTCTAATTATTAAGGAGAAACTCCCCAAAGAATTTATTTTTCAATATCATAACTTAAGTAGTAATTTAGATAGGATTTTTCAAGAGCCACCAGCTCCCTATGTTTCTCCATTTCTGTCTTCTTCATTCGACCAAGTTCCTGACGACCTTGAGGTCTGGGTGTCAGAAAACATTATGCATCCCGCTGCGCGGCCTTGGAGACCGAATAGTATTGTTATTGAGGGTGATAGTCGTACAGGGAAGACAATGTGGGCCAGATCATTGGGACCACATAATTATTTATGTGGTCATCTCGACCTCAGTCCCAAAGTCTTCACTAATGATGCATGGTACAACATTATTGATGATGTCGATCCGCACTATCTAAAGCACTTTAAAGAGTTCATGGGTGCACAACGAGACTGGCAAAGCAACACAAAATACGGAAAGCCAATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCGGGGCCGACTTCTTCATATAAAGAATATCTCGATGAAGAAAAGAATGCATCTCTCAAAGCGTGGGCACTGAAAAATGCAACCTTCGTCACCCTCAGCGAGCCATTGTTCACAGGTTCCCATCAAGGTCCTACACCGCATAGCCAAGACGAGACGCATCAGACGTA
Protein Sequence MPPPKRFKIQAKNYFLTYPKCSLSKHDALSQILNIPTPTNKKYIKVCRELHEDGQPHLHMLIQFEGKFSCTNKRLFDLVSPTTSTHFHPNIQGAKSSSDVKSYIDKDGDTTEWGEFQIDARSARGGCQNANDACAEALNSRSKAAALLIIKEKLPKEFIFQYHNLSSNLDRIFQEPPAPYVSPFLSSSFDQVPDDLEVWVSENIMHPAARPWRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVFTNDAWYNIIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNASLKAWALKNATFVTLSEPLFTGSHQGPTPHSQDETHQT

NCBI Accession YP_005352918.1
Location 2207->2464
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGCAACCTCATCTCCACATGCTTATTCAATTCGAAGGCAAATTCTCATGCACAAATAAGCGATTATTCGACCTGGTATCCCCAACAACGTCAACCCATTTCCATCCAAACATTCAAGGAGCCAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAAGATGGGGATACAACTGAGTGGGGCGAATTCCAGATCGACGCAAGATCTGCTAGAGGCGGCTGCCAAAATGCTAATGACGCATGTGCCGAAGCCTTAA
Protein Sequence MGNLISTCLFNSKANSHAQISDYSTWYPQQRQPISIQTFKEPNPAPTSSPTSTKMGIQLSGANSRSTQDLLEAAAKMLMTHVPKP

NCBI Accession YP_005352919.1
Location 359-1135
Gene Name BV1
Protein Name nuclear shuttle protein (NSP)
Coding Region ATGTATTCTGTTAACAGACGTGGGTATAAGACTCCGTATAGGAGTCCGTATGTCGCTCGTGTAACACCATATGTTTATCGTAAGACGTCGTTTAAACATACGTCTAAATCTCGTGTACCTCGAAAGTTGGCGTATGAATCGCCAAAAGTGTTATATATGCGACGCTCAATGGAAGATGTCCATGATGGGGCTTCTTTGAAGTTGCCTCAACAGGGGGATCATACGTCCTACGTGACACTCCCGTGTCGTGGTATCGATGGTAATGGGGGTAGGTCTGTGGACCATATAAAATTATTAAGCTTGAGGGTTTCTGGGACCGTCAATGTCAGTCAATTCGGTGGTGATGACAATATGGGAGAGAAAACAACCATGATAGGTATCTTTTTCATGGCTTGTCTTGTTGATAAGAAACCTTTCGTTCCAGAGGGGGTCAGCACATTGCCGACGTTCAAGGAGTTGTTCGGGGAATATGAATCCGTGTATGGCATGCCTAGGTTGAAGGAAAACGTCCGTCACCGTTATCGCGTTATTGGGACGTCGAAATTATATATAACGACCGATGAAGATCACATCCAGAAGCCTTTTAGTATACGTCGAAGACTCAGTGGAGGGAAATATCCTATTTGGTCTTCGTTCAAGGATGTGGATAATAGTAGTACAGGTGGTAACTATAAAAATGTAAATAAGAACGCTATACTAGTTAGTTATGTGTGGGTATCGCTATGTCGGAGCACCTGTGATGTGTATTCTCAGTTTGTACTTAATTACGTCGGCTGA
Protein Sequence MYSVNRRGYKTPYRSPYVARVTPYVYRKTSFKHTSKSRVPRKLAYESPKVLYMRRSMEDVHDGASLKLPQQGDHTSYVTLPCRGIDGNGGRSVDHIKLLSLRVSGTVNVSQFGGDDNMGEKTTMIGIFFMACLVDKKPFVPEGVSTLPTFKELFGEYESVYGMPRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSIRRRLSGGKYPIWSSFKDVDNSSTGGNYKNVNKNAILVSYVWVSLCRSTCDVYSQFVLNYVG

NCBI Accession YP_005352920.1
Location 1264->2298
Gene Name BC1
Protein Name movement protein (MP)
Coding Region ATGTTCATGTTACTGCATGTATGCTCATATGATTTGACCAATCTCATAATTATTACTGCATTTTATGTATACATTCTCACTTATAACGTCATTTGTCACAAACCACACAGGATGGAGGCCACATATACAGTTGACAACAACCGATACATCGACACCAAAAGGACCGAGTATGCACTGACAAATGACGCATCACCGATTTATCTTCAATTTCCCAGTTCATTCGAACAGGCCACCATGCGGCTTAAGGGCAGATGCATGAAGATCGATCACATCATAATAGAATACAATAACCAAGTCCCATTTAATGCAACGGGCTCAGTAATTGTGGAGATCAGGGATAATCGCGTGAGCCTCGAAGACGCAGCACAAGCTGCTTTCACATTCCCGATAACGTGTAACGTCGATCTCCATTACTACTCCTCCACTTACTTCTCAGTGTCAGAACCCTCACCATGGGAAATTATATACAAAGTCGAGGACTCGAACGTCGTAGAAGGGGTCAAATTCGCCTCCATCAAGGCAAGACTAAGATTATCGACTGCCAAGCATTCCACGGACATACGATTCAAGCCCCCTACGATCAACATACGATCCAAGGGATTCACAAAAGAATGCATAGACTTTTGGTCCGTGGAACGTGGAGAAACCAGACGGCGTCTCCTCAATCCAAATCCATCTGCTCAGACCCACAGAACAATATCCACTAGGCCCATTACCATAATGCCTGGAGAAACATGGGCCACAAAGTCTCAGATTGGGCTACCCAGCTCATCAAACCCAGCACGGCTGGAACACTTTCGTTCACAGTCCATGAGAATGGACCCATCGACAACACCAACAGACTTAGACAACGAGTCCACAGAATATCCTTACCAGAGACTACACAGATTAAACACACCAGAGTTAGACCCAGGAGACTCAGTATCACAGGCCCCATCCGACTCAGTATCCAGAAAGGACCTCGAGACCCTGCTGGAGAGTACCATAAACAAGTGTCTCATCAAAATCAAATCCGAAGCCCCACGGCAATTGTAA
Protein Sequence MFMLLHVCSYDLTNLIIITAFYVYILTYNVICHKPHRMEATYTVDNNRYIDTKRTEYALTNDASPIYLQFPSSFEQATMRLKGRCMKIDHIIIEYNNQVPFNATGSVIVEIRDNRVSLEDAAQAAFTFPITCNVDLHYYSSTYFSVSEPSPWEIIYKVEDSNVVEGVKFASIKARLRLSTAKHSTDIRFKPPTINIRSKGFTKECIDFWSVERGETRRRLLNPNPSAQTHRTISTRPITIMPGETWATKSQIGLPSSSNPARLEHFRSQSMRMDPSTTPTDLDNESTEYPYQRLHRLNTPELDPGDSVSQAPSDSVSRKDLETLLESTINKCLIKIKSEAPRQL

References More References in PubMed

1

A novel cassava-infecting begomovirus from Madagascar: cassava mosaic Madagascar virus.

Harimalala M, et al.  Arch Virol. 2012 Oct;157(10):2027-30. doi: 10.1007/s00705-012-1399-3. Epub 2012 Jul 10.

PMID: 22777180

2

Divergent evolutionary and epidemiological dynamics of cassava mosaic geminiviruses in Madagascar.

De Bruyn A, et al.  BMC Evol Biol. 2016 Sep 6;16(1):182. doi: 10.1186/s12862-016-0749-2.

PMID: 27600545

3

Cassava mosaic virus disease in East Africa: a dynamic disease in a changing environment.

Legg JP, et al.  Virus Res. 2000 Nov;71(1-2):135-49. doi: 10.1016/s0168-1702(00)00194-5.

PMID: 11137168

4

Molecular characterization of a new alphasatellite associated with a cassava mosaic geminivirus in Madagascar.

Harimalala M, et al.  Arch Virol. 2013 Aug;158(8):1829-32. doi: 10.1007/s00705-013-1664-0. Epub 2013 Mar 23.

PMID: 23525698

5

First Report of East African Cassava Mosaic Begomovirus in Ghana.

Offei SK, et al.  Plant Dis. 1999 Sep;83(9):877. doi: 10.1094/PDIS.1999.83.9.877C.

PMID: 30841053

6

First Report of East African Cassava Mosaic Begomovirus in Nigeria.

Ogbe FO, et al.  Plant Dis. 1999 Apr;83(4):398. doi: 10.1094/PDIS.1999.83.4.398A.

PMID: 30845599

7

First Molecular Identification of a Begomovirus Isolated from Tomato in Madagascar.

Delatte H, et al.  Plant Dis. 2002 Dec;86(12):1404. doi: 10.1094/PDIS.2002.86.12.1404C.

PMID: 30818457

8

A New Tomato leaf curl virus from Mayotte.

Lett JM, et al.  Plant Dis. 2004 Jun;88(6):681. doi: 10.1094/PDIS.2004.88.6.681B.

PMID: 30812598