| Genus | Begomovirus | 
|---|---|
| NCBI Assembly | GCF_000874525.1 | 
| Isolate | Brazil | 
| Release date | 2015/2/13 | 
| Submitter | Albuquerque,L.C., Martin,D.P., Avila,A.C., Inoue-Nagata,A.K., Ribeiro,S.G., Daniels,J., Fernandes-Carrijo,F.R. | 
| Host | |
| Download | Genome |GFF3 |PEP |CDS | 
            | NCBI Accession | YP_001974404.1 | 
|---|---|
| Location | 156-899 | 
| Gene Name | CP | 
| Protein Name | AV1 | 
| Coding Region | ATGCCAAAGCGGGATGCCCCATGGCGTATAATGGCGGGGACCACTAAAGTGTCCCGCTCTTCCAATTATTCACCTCGTGGAGGTATTTCCAAGCGGGATGCTTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATTTATCGAACGTTGAGAGGCCCTGATGTTCCTAAAGGGTGTGAAGGCCCATGTAAGGTCCAGTCCTACGAGCAGCGTCATGACATTTCTCATCTTGGCAAGGTGATGTGTATCTCTGATATCACACGTGGTAATTGTATTACACACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCCGTATACATTTTAGGGAAGATATGGATGGACGAAAATATTAAATTGAAAAACCACACGAACAGCGTCATCTTCTGGTTGGTAAGGGATCGGAGACCGTATGGGACACCTATGGATTTTGGCCAAGTGTTTAATATGTTTGATAATGAGCCTAGTACTGCTACTGTGAAGAACGATCTTCGTGATCGGTTTCAAGTCATGCATAGGTTTAATGCTAAGGTTACGGGTGGACAGTATGCTAGCAACGAGCAAGCTCTTGTGCGGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAACCATCAGGAAGCAGGGAAATATGAGAATCACACGGAGAACGCTTTGTTATTGTATATGGCATGTACACATGCTTCTAACCCACTGTATGCAACTTTGAAAATTCGGATCTATTTTTATGATTCGATTACAAATTAA | 
| Protein Sequence | MPKRDAPWRIMAGTTKVSRSSNYSPRGGISKRDAWVNRPMYRKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHLGKVMCISDITRGNCITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPLYATLKIRIYFYDSITN | 
| NCBI Accession | YP_001974405.1 | 
|---|---|
| Location | 896-1294 | 
| Gene Name | REn | 
| Protein Name | AC3 | 
| Coding Region | ATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAAGCAGCGAATGGCGTCTTTATTTGGGAGATTACCAATCCCCTCTATTTCAAGATAATCAACGTAGAGGACCCCCTCTACACAACGACACGGATATACCATCTACAGATACGTTTCAACCACAACCTGCGGAAAGCGTTGGATCTCCACAAGGCTTTTCTCAATTTCCAAGTCTGGACGACATCCCTGAGAGCTTCTGGGATGACATATTTAAGTAGATTTAAGTATTTAGTCTTATTGTATTTAAACCAATTAGGTGTTATTTCCGTTAATAATGTAATCAGAGCTGTTCGTTTCGCAACAGACAAATCTTATGTAAATTATGTACTTGAAAATCATTCAATAAAATTTAGACTTTATTAA | 
| Protein Sequence | MDSRTGELITAPQAANGVFIWEITNPLYFKIINVEDPLYTTTRIYHLQIRFNHNLRKALDLHKAFLNFQVWTTSLRASGMTYLSRFKYLVLLYLNQLGVISVNNVIRAVRFATDKSYVNYVLENHSIKFRLY | 
| NCBI Accession | YP_001974406.1 | 
|---|---|
| Location | 1041-1430 | 
| Gene Name | TrAP | 
| Protein Name | AC2 | 
| Coding Region | ATGCTAAATACATCTTCCTCAACTCCCCCCTCTATCAAACCACGACACAGAGCAGCCAAACGGAAGGTAATTCGCCGAAGACGCATTGACCTAAACTGCGGCTGCTCCATTTACATCCATCTCAACTGTCGCAACAATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAAGCAGCGAATGGCGTCTTTATTTGGGAGATTACCAATCCCCTCTATTTCAAGATAATCAACGTAGAGGACCCCCTCTACACAACGACACGGATATACCATCTACAGATACGTTTCAACCACAACCTGCGGAAAGCGTTGGATCTCCACAAGGCTTTTCTCAATTTCCAAGTCTGGACGACATCCCTGAGAGCTTCTGGGATGACATATTTAAGTAG | 
| Protein Sequence | MLNTSSSTPPSIKPRHRAAKRKVIRRRRIDLNCGCSIYIHLNCRNNGFTHRGTHHCASSSEWRLYLGDYQSPLFQDNQRRGPPLHNDTDIPSTDTFQPQPAESVGSPQGFSQFPSLDDIPESFWDDIFK | 
| NCBI Accession | YP_001974407.1 | 
|---|---|
| Location | 1342-2427 | 
| Gene Name | Rep | 
| Protein Name | AC1 | 
| Coding Region | ATGCCCCTTCCAAAGCGTTTCTTAGTAAATGCAAAAAATTTCTTCCTTACATATCCTCATTGTTCATTAACTAAAGACGAAGCTCTTTCACAATTACAGGCACTTCAAACACCTACCAACAAGAAATTTATTCGCGTAACCAGAGAACTTCACGAAGATGGGGAACCTCATCTCCACGTGCTTATACAGTTCGAAGGCAAATTCAAATGCCACAATCAACGATTCTTCGATTTGGTATCCCCAACCAGATCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCGTCAGACGTCAAGACCTACATGGAGAAAGACGGAGACTTCATTGATTTTGGAACTTTCCAGATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCAAACGACACTTATGCCAAGGTTCTCAACGCAGATAATCCAACCACGGCACTCAATATATTAAAAGAAGAGCAACCTCGAGATTATGTTCTACATCTGGATAAAATAAGAACACATGTCCAGAGAATATTTGCAAAGGCTCCAGAGCCATGGGTTTCTCCGTTTCAACTTTCCTCCTTCACTAATGTTCCTGACGAGATGCAAGAGTGGGCTGACGAATATTTCGGAAGGGGTGCCGCTGCGCGGCCGGAGAGACCTATTAGTATTATAATTGAGGGTGATAGTCGTACAGGAAAGACGATGTGGGCTCGTGCATTAGGCCCACATAATTATCTGAGTGGACATCTAGATTTTAATTCTAGGGTTTATTCAAATGAGGTGCATTATAACGTCATTGATGATGTCACTCCGCAATACCTAAAGCTAAAACATTGGAAAGAGCTCATTGGGGCCCAACGTGACTGGCAAAGCAACTGCAAATACGGGAAGCCAGTTCAAATTAAAGGAGGAATCCCATCAATCGTGCTCTGCAATCCAGGAGAGGGGGCTAGTTATAAAGACTTCCTAGACAAACATGAAAATATATCTTTAAAAACGTGGACACTGCATAATGCTAAATACATCTTCCTCAACTCCCCCCTCTATCAAACCACGACACAGAGCAGCCAAACGGAAGGTAATTCGCCGAAGACGCATTGA | 
| Protein Sequence | MPLPKRFLVNAKNFFLTYPHCSLTKDEALSQLQALQTPTNKKFIRVTRELHEDGEPHLHVLIQFEGKFKCHNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYMEKDGDFIDFGTFQIDGRSARGGCQSANDTYAKVLNADNPTTALNILKEEQPRDYVLHLDKIRTHVQRIFAKAPEPWVSPFQLSSFTNVPDEMQEWADEYFGRGAAARPERPISIIIEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNEVHYNVIDDVTPQYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKHENISLKTWTLHNAKYIFLNSPLYQTTTQSSQTEGNSPKTH | 
| NCBI Accession | YP_001974408.1 | 
|---|---|
| Location | 1977-2270 | 
| Gene Name | AC4 | 
| Protein Name | AC4 | 
| Coding Region | ATGGGGAACCTCATCTCCACGTGCTTATACAGTTCGAAGGCAAATTCAAATGCCACAATCAACGATTCTTCGATTTGGTATCCCCAACCAGATCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCGTCAGACGTCAAGACCTACATGGAGAAAGACGGAGACTTCATTGATTTTGGAACTTTCCAGATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCAAACGACACTTATGCCAAGGTTCTCAACGCAGATAATCCAACCACGGCACTCAATATATTAA | 
| Protein Sequence | MGNLISTCLYSSKANSNATINDSSIWYPQPDQHISIQTFRELKARQTSRPTWRKTETSLILELSRSMEDQLEEVANLQTTLMPRFSTQIIQPRHSIY | 
| NCBI Accession | YP_001974409.1 | 
|---|---|
| Location | 402-1172 | 
| Gene Name | NSP | 
| Protein Name | BV1 | 
| Coding Region | ATGTATATTAATAAGTATAGACGTGGCTGGATATCTAATCAACGACGAGGCTATTCACGTCAGTCTTTCTTCAAGCGTTCTTATTATGTTAAACGTACAGATGGGAAACGTCGATCGAGTAGCACGACTCAAGTCAATGAGGAGAGCAGATTGTCACAACAGCGAATTCATGAGAACCAGTTTGGTCCAGAATTTGTAATGGTTCATAATACAGCCGTATCAACCTTTATTACTTTCCCCAATCTTGGTAAAACTGAACCGAATCGATCTAGGTCATATATAAAGTTGAAACGTTTGCGTTTCAAAGGTACTGTTAAAATTGAACGTTTGCATACTGATATGAAAATGGACTGTATAATTCCAAATATCGAAGGAGTGTTTTCGTTGGTCATCGTAGTTGATCGTAAACCCCATTTGAATCCAACAGGATGTCTACATACATTTGATGAGCTATTTGGTGCACGAATACACAGTCATGGCAATTTAGCTATAACCGCATCTCTGAAAGACCGATTTTACATACGTCATGTTTGGAAGAAAGTAATATCTGTTGAGAAAGATAGCATGATGGTTGATCTTGAAGGAACGACATCACTATCTAACAAGCGTTATAATTGTTGGTCAGCTTTTAAGGATCTTGATCATGATTCATGTAATGGGGTTTATGCGAATATAAGCAAGAACGCCCTTTTAGTTTACTATTGTTGGATGTCTGATACCATGTCTACAGCATCCTCATTTGTATCGTTTGATCTTGATTATGTGGGTTAA | 
| Protein Sequence | MYINKYRRGWISNQRRGYSRQSFFKRSYYVKRTDGKRRSSSTTQVNEESRLSQQRIHENQFGPEFVMVHNTAVSTFITFPNLGKTEPNRSRSYIKLKRLRFKGTVKIERLHTDMKMDCIIPNIEGVFSLVIVVDRKPHLNPTGCLHTFDELFGARIHSHGNLAITASLKDRFYIRHVWKKVISVEKDSMMVDLEGTTSLSNKRYNCWSAFKDLDHDSCNGVYANISKNALLVYYCWMSDTMSTASSFVSFDLDYVG | 
| NCBI Accession | YP_001974410.1 | 
|---|---|
| Location | 1306-2187 | 
| Gene Name | MP | 
| Protein Name | BC1 | 
| Coding Region | ATGGATTCTCAAATAGTTTGCCCACCAAACGCCTTTAATTATATAGAATCTCGTCGTGATGAATATCAGCTATCTCACGACCTTACGGAAATCATATTGCAGTTTCCTTCAAAAGCGACTCAATTAAGTGCAAGACTAAATAGAAGCTGTATGAAGATTGACCATTGCGTCATAGAATATAGGCAACAGGTACCCATAAACGCAACAGGATCAGTAATTGTGGAGATTCATGACCAGAGGATGACTGAAAATGAATCATTACAGGCGTCATGGACTTTTCCTATAAGATGCAACATAGATCTCCACTATTTCTCATCGTCATTCTTCTCCCTCAAAGACCCAATTCCATGGAAGCTATATTATAAGGTTTGTGATTCAAATGTTCATCAGATGACACACTTCGCAAAATTCAAAGGGAAGCTGAAGCTATCAACTGCAAAACATTCGGTTGATATACCTTTCAGAGCACCCACAGTAAAGATAATGTCCAAACAATTTACCGTAAATGACATCGACTTTTCTCATGTGGGTTATGGGAAGTGGGAGAGGAAATTGATAAGATCCGCATCCACTTCTAGATTTGGGCTTCCCGGCCCAATAGAATTAAACCCAGGAGAGTCTTGGGCCACACGGAGTACAATAGGGCCGGCCCAGTTAGAAGCAGAATCAGATATTGCTGAAGTGTTACATCCATACAAGGATCTTAACAGGTTGGGCACTGCCATCTTAGACCCAGGTGATTCGGCTTCAATAATTGGGGCCCAAAGAACGCAATCGAATATAACACTATCAATGGCCCAATTAAACGATCTTGTTAGGACGACGGTCCAAGAATGTATTAAAACTAATTGTATTCCTTCACAGCCCAAATCTTTGAAATAA | 
| Protein Sequence | MDSQIVCPPNAFNYIESRRDEYQLSHDLTEIILQFPSKATQLSARLNRSCMKIDHCVIEYRQQVPINATGSVIVEIHDQRMTENESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYKVCDSNVHQMTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIMSKQFTVNDIDFSHVGYGKWERKLIRSASTSRFGLPGPIELNPGESWATRSTIGPAQLEAESDIAEVLHPYKDLNRLGTAILDPGDSASIIGAQRTQSNITLSMAQLNDLVRTTVQECIKTNCIPSQPKSLK | 
| 1 | 
                            
                             Dos Reis LNA, et al. Virus Genes. 2021 Feb;57(1):127-131. doi: 10.1007/s11262-020-01810-z. Epub 2020 Nov 19. PMID: 33211226  | 
                    
|---|---|
| 2 | 
                             Characterization of tomato yellow vein streak virus, a begomovirus from Brazil. Albuquerque LC, et al. Virus Genes. 2010 Feb;40(1):140-7. doi: 10.1007/s11262-009-0426-2. Epub 2009 Nov 24. PMID: 19937269  | 
                    
| 3 | 
                             Tomato mottle wrinkle virus, a recombinant begomovirus infecting tomato in Argentina. Vaghi Medina CG, et al. Arch Virol. 2015 Feb;160(2):581-5. doi: 10.1007/s00705-014-2216-y. Epub 2014 Sep 25. PMID: 25252814  | 
                    
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                             Rapid detection of fifteen known soybean viruses by dot-immunobinding assay. Ali A. J Virol Methods. 2017 Nov;249:126-129. doi: 10.1016/j.jviromet.2017.09.003. Epub 2017 Sep 6. PMID: 28887190  | 
                    
| 5 | 
                            
                             Bornancini VA, et al. Viruses. 2020 Feb 11;12(2):202. doi: 10.3390/v12020202. PMID: 32054104  | 
                    
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                             Reyna PG, et al. Arch Virol. 2021 May;166(5):1409-1414. doi: 10.1007/s00705-021-05002-4. Epub 2021 Feb 28. PMID: 33646405  | 
                    
| 7 | 
                             A New Geminivirus Associated with Tomato in the State of Sao Paulo, Brazil. Faria JC, et al. Plant Dis. 1997 Apr;81(4):423. doi: 10.1094/PDIS.1997.81.4.423B. PMID: 30861828  | 
                    
| 8 | 
                             Diversity and prevalence of Brazilian bipartite begomovirus species associated to tomatoes. Fernandes FR, et al. Virus Genes. 2008 Feb;36(1):251-8. doi: 10.1007/s11262-007-0184-y. Epub 2008 Jan 4. PMID: 18175211  | 
                    
| 9 | 
                            
                             Ribeiro SG, et al. Plant Dis. 1998 Jul;82(7):830. doi: 10.1094/PDIS.1998.82.7.830C. PMID: 30856961  | 
                    
| 10 | 
                            
                             Souza-Dias JAC, et al. Plant Dis. 2008 Mar;92(3):487. doi: 10.1094/PDIS-92-3-0487C. PMID: 30769698  |