Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000896215.1 |
Isolate | Cuba |
Release date | 2015/2/22 |
Submitter | Fiallo-Olive,E., Martinez-Zubiaur,Y., Rivera-Bustamante,R.F., Hernandez-Zepeda,C., Trejo-Saavedra,D., Carrillo-Trip,J., Rivera-Bustamante,R. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_002268202.1 |
---|---|
Location | 204-959 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGCGATCTTCCATGGCGCTCGATCGCGGGAACGTCAAAGGTGAGCCGCAATGCGAATTACTCACCACGTGGCGGTATGGGCCCAAAATTCAACAAGGCCCAGGCTTGGGTTGATCGGCCTATGTTCAAGAAGCCCAGGATATATCGGACTTTGACCAGTCCAGATGTGCCACGAGGCTGTGAAGGGCCTTGTAAGATCCAGTCGTTTGAGCAAAGGCATGACATCTCTCATGTCGGTAAGGTCATGTGTATATCCGATGTCACACGTGGCAATGGCATTACCCACCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATTTTAGTTAAGGTATGGATGGATGAGAACATCAAGCTCAAGAATCACACGAACAGTGTGATGTTCTGGTTGGTCCGAGACCGTCGACCGTATGGTACGCCTATGGATTTCGGTCAGGTGTTCAACATGTTCGACAACGAGCCTAGTACAGCCACGGTTAAGAACGATCTGCGTGATCGTTTCCAGGTATTGCACAAGTTCTACTCGAAGGTGACAGGTGGACAGTATGCCAGTAATGAACAGGCGCTGGTCAAGCGTTTCTGGAAGGTCAATACTCGTGTCGTCTACAACCACCAGGAAGCCGCTAAGTACGAGAATCATACGGAGAACGCCCTGTTATTGTACATGGCATGTACTCATGCCTCTAACCCCGTGTATGCAACCTTGAAGATTCGGATCTATTTTTACGATTCGATCATGAATTAA |
Protein Sequence | MPKRDLPWRSIAGTSKVSRNANYSPRGGMGPKFNKAQAWVDRPMFKKPRIYRTLTSPDVPRGCEGPCKIQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILVKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVLHKFYSKVTGGQYASNEQALVKRFWKVNTRVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession | YP_002268203.1 |
---|---|
Location | 956-1354 |
Gene Name | AC3 |
Protein Name | replication enhancement protein |
Coding Region | ATGGATTCACGCACCGGGGAACTCATCACTGCACGTCAGGCGGAGAATGGCGTGTATACCTGGGAGATAGAAAATCCCCTGTATTTCAAGATGTACAGGGTAGAGGATCCGTTGTACACCAGGACAAGGGTCTACCATATCCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCTTACCTGAACTTCCAAGTCTGGACGACATCGATGAAAGCTTCTGGGTCAACTTATTTAATTAGGTTTAGACATTTAGTTAACATGTACTTAGATCAGTTAGGCGTGATTTGCATAAACAATGTAATCAGAGCTGTTCGATTCGCGACAGACAGATCGTATGTGAGTCATGTACTGGAAAATCATTCAATAAAATTTAAATTTTATTAA |
Protein Sequence | MDSRTGELITARQAENGVYTWEIENPLYFKMYRVEDPLYTRTRVYHIQIRFNHNLRRALHLHKAYLNFQVWTTSMKASGSTYLIRFRHLVNMYLDQLGVICINNVIRAVRFATDRSYVSHVLENHSIKFKFY |
NCBI Accession | YP_002268204.1 |
---|---|
Location | 1101-1490 |
Gene Name | AC2 |
Protein Name | transactivator protein |
Coding Region | ATGCGATCTTCATCACCCTCACATCCGCCCTCTATCAAGAAGGCACACAGGCAGGCCAAGAAGAGGGCGATCAGGAGGAGGCGGATTGATCTGGAGTGCGGTTGCTCCATCTACTTCCACATAGGCTGCACGGGACATGGATTCACGCACCGGGGAACTCATCACTGCACGTCAGGCGGAGAATGGCGTGTATACCTGGGAGATAGAAAATCCCCTGTATTTCAAGATGTACAGGGTAGAGGATCCGTTGTACACCAGGACAAGGGTCTACCATATCCAGATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCTTACCTGAACTTCCAAGTCTGGACGACATCGATGAAAGCTTCTGGGTCAACTTATTTAATTAG |
Protein Sequence | MRSSSPSHPPSIKKAHRQAKKRAIRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGGEWRVYLGDRKSPVFQDVQGRGSVVHQDKGLPYPDTVQPQPEESVASPQSLPELPSLDDIDESFWVNLFN |
NCBI Accession | YP_002268205.1 |
---|---|
Location | 1402-2487 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGCCATCGGTTAAGCGTTTCAAAGTCTCAGCCAAAAACTATTTCCTCACTTATCCACAGTGCTCTCTGACAAAAGAAGAGGCACTTTCCCAATTACAAAACCTTGAAACACCAGTTAACAAGAAGTTCATCAAAATCTGCAGAGAGCTTCATGAGAATGGGGAGCCTCATCTCCATGTGCTCATACAGTTCGAAGGAAAATACCAATGCAAGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACACTGGAATGGGGAGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGCAAGCAGTCTGCTAATGATTCATATGCCAAGGCGTTAAATGCAGATTCTGTTCAATCTGCCATGGCGGTTTTAAGGGAAGAACAGCCAAAAGATTTCGTCTTGCAGAATCATAACATCCGCTCCAATCTAGAGAGGATATTCAAAAAGGCTCCGGAACCGTGGGTTCCTCCGTTTCAACTCTCGTCCTTCACTAACGTTCCCGATGAGATGCAGGAGTGGGCGGATGATTATTTTGGAAGAGGTTCCGCTGCGCGGCCACAGAGACCATTGAGTATCATCGTAGAAGGTGATTCAAGGACAGGGAAGACCATGTGGGCTCGTGCGTTAGGCCCACATAATTATCTAAGTGGACACCTGGACTTCAATGGTCGAGTCTTTTCGAATGAAGTGGAGTATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAATTGATCGGGGCCCAAAAAGACTGGCAGTCAAATTGCAAATACGGCAAGCCAGTTCAAATTAAAGGTGGAATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCTAGCTATAAAGCTTTCCTGGACAAAGAGGAAAACGCATCTCTCAGGAACTGGACTGTCAAGAATGCGATCTTCATCACCCTCACATCCGCCCTCTATCAAGAAGGCACACAGGCAGGCCAAGAAGAGGGCGATCAGGAGGAGGCGGATTGA |
Protein Sequence | MPSVKRFKVSAKNYFLTYPQCSLTKEEALSQLQNLETPVNKKFIKICRELHENGEPHLHVLIQFEGKYQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGKQSANDSYAKALNADSVQSAMAVLREEQPKDFVLQNHNIRSNLERIFKKAPEPWVPPFQLSSFTNVPDEMQEWADDYFGRGSAARPQRPLSIIVEGDSRTGKTMWARALGPHNYLSGHLDFNGRVFSNEVEYNVIDDVAPHYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKAFLDKEENASLRNWTVKNAIFITLTSALYQEGTQAGQEEGDQEEAD |
NCBI Accession | YP_002268206.1 |
---|---|
Location | 2073-2336 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGAGAATGGGGAGCCTCATCTCCATGTGCTCATACAGTTCGAAGGAAAATACCAATGCAAGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACACTGGAATGGGGAGAATTCCAGATCGACGGCAGATCTGCTAGAGGAGGCAAGCAGTCTGCTAATGATTCATATGCCAAGGCGTTAA |
Protein Sequence | MRMGSLISMCSYSSKENTNARITDSSIWSPQPGQHISIRTYRELNPAPTSSPTSTRTEIHWNGENSRSTADLLEEASSLLMIHMPRR |
NCBI Accession | YP_006331058.1 |
---|---|
Location | 415-1182 |
Gene Name | bv1 |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTATCCTTTGAGAAGTAAACGTGGTTCATTTTTTACGCCACGTCGTTTTTATCCACGTAACACTGTCCTCAAGCGTTCAACCTCGTCGAAGAGACATGACTCGAAACGTCGACTTGTTAATTCCAACAAGCCCAGTGATGAGCCCAAGATGTCAGTCCAACGCATTCATGAGAATCAGTATGGGCCAGATTTCTCTATGGCCCATAATTCAGCTGTCTCGACGTATGTCAGTTATCCTAGCCTGGGAAAGTCCGAACCCAACCGAAGCAGGTCCTATATTAAGTTGAAACAGCTACGTTTCAAAGGGACTGTGAAGATTGAACGTGTTCAGACGGACCTGAACATGGACGGTTCTACCCCCAAGTTGAAGAGTCTTCTCCATGTGATTGTTGTGGATCGCAAACCCCACTTGGGTCCTTCTGGATGTCTACATACGTTTGACGAGCTATTCGGTGCTAGGATCCACAGTCATGGTAACCTCAGCGTTACCCCTTCCTTGAAAGATCGTTATTACATCCGCCACGTGTGCAAACGTGTATTATCTGTCGAGAAGGATACGCTTATGGTAGACGTGGAAGGATCTATTTCACTCTCTAACAGGCGTTTTAGTTGTTGGTCTACGTTTAAGGATCTTGATCGTGATTCGTGCAAGGGTGTTTATGATAATATAAGCAAGAACGCCCTACTAGTTTATTACTGCTGGATGTCCGATACGCCTTCAAAGGCATCGACATTTGTATCATTTGATCTTGATTACGTTGGTTAA |
Protein Sequence | MYPLRSKRGSFFTPRRFYPRNTVLKRSTSSKRHDSKRRLVNSNKPSDEPKMSVQRIHENQYGPDFSMAHNSAVSTYVSYPSLGKSEPNRSRSYIKLKQLRFKGTVKIERVQTDLNMDGSTPKLKSLLHVIVVDRKPHLGPSGCLHTFDELFGARIHSHGNLSVTPSLKDRYYIRHVCKRVLSVEKDTLMVDVEGSISLSNRRFSCWSTFKDLDRDSCKGVYDNISKNALLVYYCWMSDTPSKASTFVSFDLDYVG |
NCBI Accession | YP_006331059.1 |
---|---|
Location | 1243-2124 |
Gene Name | bc1 |
Protein Name | movement protein |
Coding Region | ATGGAGTCTCAGTTAGCTAATCCTCCGAACGCTTTCAACTACATAGAGTCACACCGTGACGAGTACCAGCTTTCCCATGACTTAACTGAGATCGTACTGCAATTTCCGTCGACGGCGTCTCAGTTGACAGCTAGACTCAGTCGTAGCTGCATGAAGATCGATCACTGCGTCATAGAGTACAGGCAACAAGTGCCGATTAACGCAACCGGGTCGGTAATTGTGGAGATCCACGACAAGAGGATGACAGACAACGAGTCATTACAGGCGTCGTGGACCTTTCCGATCAGATGCAACATAGATCTCCACTATTTCTCGGCTTCGTTCTTCTCCTTGAAAGACCCAATTCCATGGAAGTTGTACTACAGGGTTTCCGATACGAATGTTCATCAGAGGACCCACTTCGCCAAGTTCAAAGGGAAACTGAAACTATCAACGGCGAAGCATTCCGTCGACATCCCATTCCGAGCACCGACAGTAAAGATCCTGTCGAAACAGTTCACCGATAAAGATGTGGACTTCAACCATGTCGACTACGGGAAATGGGAAAGGAAGCCCATTAGATGCGCGTCCATGTCAAGGCTTGGAATAAGAGGCCCAATTGAGATAAGGCCTGGAGAGTCATGGGCTTCCAGGAGTACTATAGGAACAGGCCTGTCAGAGGCGGATTCAGAGGTGGAGAACGAGCTCCATCCATACAGGCACCTCAACAGGCTAGGGACCAGCGTTATGGATCCGGGAGAGTCTGCCTCCATTGTAGGGGCCCAGAGAGCCGAGTCCAATATCACGATGTCTATGGCCCAATTAAATGATTTGGTTAGGACAACTGTCCAAGAGTGTATTAACAATAACTGTCAGGCTTCCAAGCCCAAATCATTTCAATAA |
Protein Sequence | MESQLANPPNAFNYIESHRDEYQLSHDLTEIVLQFPSTASQLTARLSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDVDFNHVDYGKWERKPIRCASMSRLGIRGPIEIRPGESWASRSTIGTGLSEADSEVENELHPYRHLNRLGTSVMDPGESASIVGAQRAESNITMSMAQLNDLVRTTVQECINNNCQASKPKSFQ |
1 |
An anomalous detection of Tomato yellow leaf curl virus in tomato in New York State. Perry KL. Plant Dis. 2021 Apr 28. doi: 10.1094/PDIS-02-21-0356-PDN. Online ahead of print. PMID: 33908793 |
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2 |
First report of squash leaf curl China virus infecting tomato in China. Qiu Y, et al. Plant Dis. 2022 Feb 27. doi: 10.1094/PDIS-10-21-2192-PDN. Online ahead of print. PMID: 35224985 |
3 |
Molecular characterization and pathogenicity of tomato yellow leaf curl virus in China. Zhang H, et al. Virus Genes. 2009 Oct;39(2):249-55. doi: 10.1007/s11262-009-0384-8. PMID: 19590945 |
4 |
First Report of Tomato yellow leaf curl virus Infecting Tomato, Tomatillo, and Peppers in Guatemala. Salati R, et al. Plant Dis. 2010 Apr;94(4):482. doi: 10.1094/PDIS-94-4-0482C. PMID: 30754504 |
5 |
Zambrano K, et al. Arch Virol. 2011 Dec;156(12):2263-6. doi: 10.1007/s00705-011-1093-x. Epub 2011 Aug 19. PMID: 21853328 |
6 |
Introduction of the Exotic Monopartite Tomato yellow leaf curl virus into West Coast Mexico. Brown JK, et al. Plant Dis. 2006 Oct;90(10):1360. doi: 10.1094/PD-90-1360A. PMID: 30780952 |
7 |
Alabi OJ, et al. Plant Dis. 2017 Jul;101(7):1094-1102. doi: 10.1094/PDIS-01-17-0118-RE. Epub 2017 Apr 19. PMID: 30682949 |
8 |
Chen LF, et al. Mol Plant Pathol. 2009 May;10(3):415-30. doi: 10.1111/j.1364-3703.2009.00541.x. PMID: 19400843 |
9 |
Zhou YC, et al. Arch Virol. 2008;153(4):693-706. doi: 10.1007/s00705-008-0042-9. Epub 2008 Feb 16. PMID: 18278427 |
10 |
First record of tomato yellow leaf curl Sardinia virus (TYLCSV) on pepper in Italy. Fanigliulo A, et al. Commun Agric Appl Biol Sci. 2008;73(2):297-302. PMID: 19226766 |