Tomato yellow leaf curl Yunnan virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000909115.1
Isolate China
Release date 2015/2/22
Submitter Ding,M., Li,W.H., Zhang,Z.K., Zhou,X.P.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_021341
ACCGGATGGCCGCGATTTTTTTAAAGTGGTCCCCTCCACTAACTCTTGTCGCCCACTAGAAACGCTCCCTCATCGCTTATTTAAATGTTTTTGTCTTATATATATGACTTGCCAAACAAGTGGGTTTCGTAGTGCGATGTGGGATCCACTCTTGAATGAATTCCCAGAAACCGTACATGGTTTTAGGTGTATGTTAGCAATTAAGTATTTACAATTAGTAGAAAATACATATTCTCCTGATACATTAGGGTACGATTTAATTCGTGATTTAATATTAGTTATTCGTGCTAGAGATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAACAGGCCCATGTACCGAAAGCCCAAGATGTACAGGATGTACAAAAGTCCTGATGTTCCTCGTGGATGCGAAGGCCCATGTAAGGTCCAGTCTTATGAACAACGTCACGATGTGGCCCATGTAGGTAAAGTAATTTGTGTGTCGGATGTCACCCGTGGTAATGGGTTGACGCATAGAGTGGGGAAGAGGTTCTGTGTCAAGTCTATTTACGTTTTAGGTAAGATCTGGATGGATGAGAACATTAAGACCAAGAATCACACCAATACAGTCATGTTCTTTTTGGTTCGTGATAGGAGACCATTTGGTACTCCTCAAGATTTTGGTCAGGTTTTTAACATGTATGATAACGAGCCAAGTACAGCCACTGTGAAGAACGACAACAGAGATCGTTTTCAGGTCCTTCGTCGATTCCAGGCGACGGTGACGGGTGGTCAGTATGCAAGCAAGGAGCAAGCCATAGTTAGGAAATTCATGAAGGTTAATAATCATGTTACTTACAATCATCAAGAGGCTGCGAAGTATGATAACCATACAGAGAATGCTCTTTTATTGTATATGGCATGTACTCATGCTAGTAACCCAGTGTATGCTACTTTGAAGATCAGGATCTATTTCTATGATTCTGTTCAAAATTAATAAAGTTCGAATTTTATTATATTTGAATGATCTACATAAATTGTTCCGTGCAAAACATCCCATAATACATGATTCACAGATCGAATTACATTATTAATGGATACAATCCCTAAATTATTTAAGTATTGCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGATCAGAAAACATTGGTGTAGTCCCAACGCTTTCCTCAGGTTGTGGTTGAACTGTATTCGGATCGTGATTATGTCGTGGTTCATTAAGAACGGTCGCTGGTCGTGTTTGATTATTTTGAAATATAGGGGATTTGGAACCATCCAAATATACGCGCCATTCTCTGCTTGAGTTGCAGTGATGAGTTCCCCGGTGCGAGAATCCATGATTGGCGCAGTTTATTGAGTAATAATATGTGCAGCCACGGGGTAGATCAACTCTCCGGCGTCGCACGCTCTTCTTCGCTATTCTGTGTTGGACCTTGATTGGTACTTGAGTACAATGGTTCCGTGAGGGTGATGAATTCTGCATTCTTTAGAGCCCAAGCTTTTAGTGCGGAATTCTTATCCTCGTCCAAGTACTCTTTATATGATGATGTTGGTCCAGGATTGCATAGGAAGATTGTCGGGATACCTCCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTGAAGTGCTTTAGGTAGTGGGGATCTACGTCATCAACCACGTTGTACCACGCATCATTGCTGTATACTTTAGGGCTTAGATCAAGGTGCCCACATAAATAATTATGTGGACCCAGTGACCGTGCCCACATAGTCTTCCCTGTACGACTCTCACCCTCTATGACTATACTTATGGGTCTCCATGGCCGCGCAGCGGCATCCCTTACATTATCGGCAGCCCAGCATTCAAGTTCTTCTGGAACTCGATCGAACGAAGACGATAAAAATGGACAAACAAATTCCTCTAGAGGAGGTGCAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAAAACGAAATCTTTGGGGGCTAATTCCTTAATTACGATAAGAGCCTCTGACTTACTTCCGCTGTTAAGCGCCTTGGCGTAAGCGTCATTGGCTGATTGTTGTCCCCCTCTTGCAGATCTTGCATCGATCTGAAACTCTCCCCATTCGATGGTGTCTCCGTCCTTCTCCAGATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAAATCGAAGAATCTGTTATTTTGGCACTTGTATTTTCCTTCGAATTGGATAAGCACGTGGAGATGAGGAGACCCATCTTCGTGAAGCTCTCTGCAGATTTTTATGTATTTTTTATTTGTAGGGGTTTGTAGGTTTTGTAATTGGGAAAGTGCTTCTTCTTTTGTAAGTGAGCACTGTGGATAAGTGAGGAAATAATTTTTGGCGTATATTTGGAAACGTTTGGGAGGAGTCATTTGACTGGTCAATCGGTACTCAACAAACTCCGCTATGCAATCGGTGATTGGTACTCAATATATAGTTGAGTACCAAATGGCATTATTGTAATTCCCAAAAGAAATTCAAAATTAAATTTTGAAATCCAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_008060398.1
Location 104-487
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGACTTGCCAAACAAGTGGGTTTCGTAGTGCGATGTGGGATCCACTCTTGAATGAATTCCCAGAAACCGTACATGGTTTTAGGTGTATGTTAGCAATTAAGTATTTACAATTAGTAGAAAATACATATTCTCCTGATACATTAGGGTACGATTTAATTCGTGATTTAATATTAGTTATTCGTGCTAGAGATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAACAGGCCCATGTACCGAAAGCCCAAGATGTACAGGATGTACAAAAGTCCTGA
Protein Sequence MTCQTSGFRSAMWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHTRFQGSSPSELRQPICQPCCCPHCPRHKQKEVMGEQAHVPKAQDVQDVQKS

NCBI Accession YP_008060399.1
Location 297-1070
Gene Name AV1
Protein Name CP protein
Coding Region ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAACAGGCCCATGTACCGAAAGCCCAAGATGTACAGGATGTACAAAAGTCCTGATGTTCCTCGTGGATGCGAAGGCCCATGTAAGGTCCAGTCTTATGAACAACGTCACGATGTGGCCCATGTAGGTAAAGTAATTTGTGTGTCGGATGTCACCCGTGGTAATGGGTTGACGCATAGAGTGGGGAAGAGGTTCTGTGTCAAGTCTATTTACGTTTTAGGTAAGATCTGGATGGATGAGAACATTAAGACCAAGAATCACACCAATACAGTCATGTTCTTTTTGGTTCGTGATAGGAGACCATTTGGTACTCCTCAAGATTTTGGTCAGGTTTTTAACATGTATGATAACGAGCCAAGTACAGCCACTGTGAAGAACGACAACAGAGATCGTTTTCAGGTCCTTCGTCGATTCCAGGCGACGGTGACGGGTGGTCAGTATGCAAGCAAGGAGCAAGCCATAGTTAGGAAATTCATGAAGGTTAATAATCATGTTACTTACAATCATCAAGAGGCTGCGAAGTATGATAACCATACAGAGAATGCTCTTTTATTGTATATGGCATGTACTCATGCTAGTAACCCAGTGTATGCTACTTTGAAGATCAGGATCTATTTCTATGATTCTGTTCAAAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSWVNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession YP_008060400.1
Location 1067-1471
Gene Name AC3
Protein Name REn protein
Coding Region ATGGATTCTCGCACCGGGGAACTCATCACTGCAACTCAAGCAGAGAATGGCGCGTATATTTGGATGGTTCCAAATCCCCTATATTTCAAAATAATCAAACACGACCAGCGACCGTTCTTAATGAACCACGACATAATCACGATCCGAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGACTACACCAATGTTTTCTGATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGCAATACTTAAATAATTTAGGGATTGTATCCATTAATAATGTAATTCGATCTGTGAATCATGTATTATGGGATGTTTTGCACGGAACAATTTATGTAGATCATTCAAATATAATAAAATTCGAACTTTATTAA
Protein Sequence MDSRTGELITATQAENGAYIWMVPNPLYFKIIKHDQRPFLMNHDIITIRIQFNHNLRKALGLHQCFLIFQIWTRLQPQTWRFLRVFRVQCMQYLNNLGIVSINNVIRSVNHVLWDVLHGTIYVDHSNIIKFELY

NCBI Accession YP_008060401.1
Location 1212-1616
Gene Name AC2
Protein Name TrAP protein
Coding Region ATGCAGAATTCATCACCCTCACGGAACCATTGTACTCAAGTACCAATCAAGGTCCAACACAGAATAGCGAAGAAGAGCGTGCGACGCCGGAGAGTTGATCTACCCCGTGGCTGCACATATTATTACTCAATAAACTGCGCCAATCATGGATTCTCGCACCGGGGAACTCATCACTGCAACTCAAGCAGAGAATGGCGCGTATATTTGGATGGTTCCAAATCCCCTATATTTCAAAATAATCAAACACGACCAGCGACCGTTCTTAATGAACCACGACATAATCACGATCCGAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGACTACACCAATGTTTTCTGATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG
Protein Sequence MQNSSPSRNHCTQVPIKVQHRIAKKSVRRRRVDLPRGCTYYYSINCANHGFSHRGTHHCNSSREWRVYLDGSKSPIFQNNQTRPATVLNEPRHNHDPNTVQPQPEESVGTTPMFSDLPDLDSLTTSDLAFLKSI

NCBI Accession YP_008060402.1
Location 1519-2604
Gene Name AC1
Protein Name rep protein
Coding Region ATGACTCCTCCCAAACGTTTCCAAATATACGCCAAAAATTATTTCCTCACTTATCCACAGTGCTCACTTACAAAAGAAGAAGCACTTTCCCAATTACAAAACCTACAAACCCCTACAAATAAAAAATACATAAAAATCTGCAGAGAGCTTCACGAAGATGGGTCTCCTCATCTCCACGTGCTTATCCAATTCGAAGGAAAATACAAGTGCCAAAATAACAGATTCTTCGATTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATCTGGAGAAGGACGGAGACACCATCGAATGGGGAGAGTTTCAGATCGATGCAAGATCTGCAAGAGGGGGACAACAATCAGCCAATGACGCTTACGCCAAGGCGCTTAACAGCGGAAGTAAGTCAGAGGCTCTTATCGTAATTAAGGAATTAGCCCCCAAAGATTTCGTTTTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTGCACCTCCTCTAGAGGAATTTGTTTGTCCATTTTTATCGTCTTCGTTCGATCGAGTTCCAGAAGAACTTGAATGCTGGGCTGCCGATAATGTAAGGGATGCCGCTGCGCGGCCATGGAGACCCATAAGTATAGTCATAGAGGGTGAGAGTCGTACAGGGAAGACTATGTGGGCACGGTCACTGGGTCCACATAATTATTTATGTGGGCACCTTGATCTAAGCCCTAAAGTATACAGCAATGATGCGTGGTACAACGTGGTTGATGACGTAGATCCCCACTACCTAAAGCACTTCAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGGAAACCAATTCAAATTAAAGGAGGTATCCCGACAATCTTCCTATGCAATCCTGGACCAACATCATCATATAAAGAGTACTTGGACGAGGATAAGAATTCCGCACTAAAAGCTTGGGCTCTAAAGAATGCAGAATTCATCACCCTCACGGAACCATTGTACTCAAGTACCAATCAAGGTCCAACACAGAATAGCGAAGAAGAGCGTGCGACGCCGGAGAGTTGA
Protein Sequence MTPPKRFQIYAKNYFLTYPQCSLTKEEALSQLQNLQTPTNKKYIKICRELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTIEWGEFQIDARSARGGQQSANDAYAKALNSGSKSEALIVIKELAPKDFVLQFHNLNANLDRIFAPPLEEFVCPFLSSSFDRVPEELECWAADNVRDAAARPWRPISIVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVVDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKAWALKNAEFITLTEPLYSSTNQGPTQNSEEERATPES

NCBI Accession YP_008060403.1
Location 2157-2447
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCTCCTCATCTCCACGTGCTTATCCAATTCGAAGGAAAATACAAGTGCCAAAATAACAGATTCTTCGATTTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATCTGGAGAAGGACGGAGACACCATCGAATGGGGAGAGTTTCAGATCGATGCAAGATCTGCAAGAGGGGGACAACAATCAGCCAATGACGCTTACGCCAAGGCGCTTAACAGCGGAAGTAAGTCAGAGGCTCTTATCGTAA
Protein Sequence MGLLISTCLSNSKENTSAKITDSSIWYPQPGQHISIRTYRELNPAPTSSPIWRRTETPSNGESFRSMQDLQEGDNNQPMTLTPRRLTAEVSQRLLS

References More References in PubMed

1

First Report of Tomato yellow leaf curl China virus with Betasatellite Infecting Panax notoginseng.

Li XJ, et al.  Plant Dis. 2014 Sep;98(9):1284. doi: 10.1094/PDIS-03-14-0255-PDN.

PMID: 30699620
2

A DNAbeta associated with Tomato yellow leaf curl China virus is required for symptom induction.

Cui X, et al.  J Virol. 2004 Dec;78(24):13966-74. doi: 10.1128/JVI.78.24.13966-13974.2004.

PMID: 15564504
3

Development and application of triple antibody sandwich enzyme-linked immunosorbent assays for begomovirus detection using monoclonal antibodies against Tomato yellow leaf curl Thailand virus.

Seepiban C, et al.  Virol J. 2017 May 30;14(1):99. doi: 10.1186/s12985-017-0763-z.

PMID: 28558726
4

Tobacco leaf curl Puer virus: a novel monopartite begomovirus infecting Nicotiana tabacum in China.

Jiang N, et al.  Arch Virol. 2022 Jan;167(1):229-232. doi: 10.1007/s00705-021-05267-9. Epub 2021 Oct 15.

PMID: 34652555
5

Association of an alphasatellite with tomato yellow leaf curl virus and ageratum yellow vein virus in Japan is suggestive of a recent introduction.

Shahid MS, et al.  Viruses. 2014 Jan 14;6(1):189-200. doi: 10.3390/v6010189.

PMID: 24424499
6

ty-5 Confers Broad-Spectrum Resistance to Geminiviruses.

Ren Y, et al.  Viruses. 2022 Aug 17;14(8):1804. doi: 10.3390/v14081804.

PMID: 36016426
7

Tomato yellow leaf curl Thailand virus-[Y72] from Yunnan is a monopartite begomovirus associated with DNAbeta.

Guo W, et al.  Virus Genes. 2009 Apr;38(2):328-33. doi: 10.1007/s11262-009-0327-4. Epub 2009 Jan 23.

PMID: 19165588
8

First Report of Ageratum yellow vein virus Causing Tobacco Leaf Curl Disease in Fujian Province, China.

Liu Z, et al.  Plant Dis. 2008 Jan;92(1):177. doi: 10.1094/PDIS-92-1-0177B.

PMID: 30786379
9

Molecular characterization of squash leaf curl Yunnan virus, a new begomovirus and evidence for recombination.

Xie Y, et al.  Arch Virol. 2003 Oct;148(10):2047-54. doi: 10.1007/s00705-003-0153-2.

PMID: 14551824
10

Identification and Analysis of Potential Genes Regulated by an Alphasatellite (TYLCCNA) that Contribute to Host Resistance against Tomato Yellow Leaf Curl China Virus and Its Betasatellite (TYLCCNV/TYLCCNB) Infection in Nicotiana benthamiana.

Luo C, et al.  Viruses. 2019 May 15;11(5):442. doi: 10.3390/v11050442.

PMID: 31096636