Genus | Begomovirus |
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NCBI Assembly | GCF_000873945.1 |
Isolate | Viet Nam: Hanoi |
Release date | 2015/2/13 |
Submitter | Ha,C., Coombs,S., Revill,P., Harding,R., Vu,M., Dale,J., Ha,C.V., Revill,P.A., Harding,R.M., Vu,M.T., Dale,J.L. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_001285742.1 |
---|---|
Location | 130-480 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGATCCGCTTTTAAACGAATTTCCCGAAACCGTTCACGGTTTTAGGTGTATGCTAGCGATTAAATATTTGCAATTAGTAGAAAATACATACTCTCCGGATACATTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTATTCGTGCCAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAACCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGTCCCATGTACCGCAAGCCCAAGATGTACAGAATGTACAAAAGCCCTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESSHVPQAQDVQNVQKP |
NCBI Accession | YP_001285743.1 |
---|---|
Location | 290-1063 |
Gene Name | AV1 |
Protein Name | CP protein |
Coding Region | ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAACCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGTCCCATGTACCGCAAGCCCAAGATGTACAGAATGTACAAAAGCCCTGATGTTCCACGAGGATGTGAAGGCCCATGTAAAGTCCAGTCTTATGAACAGCGTCATGATGTAGCCCATGTAGGGAAGGTAATTTGTGTGTCTGATGTTACACGTGGTAACGGGTTGACTCATCGTGTTGGTAAGAGGTTCTGTATTAAGTCAGTTTATGTTTTGGGTAAGATCTGGATGGATGAGAACATTAAGACGAAGAATCATACTAATACGGTCATGTTCTTTTTAGTACGTGATAGAAGACCTTTTGGAACTCCCCAAGATTTTGGTCAGGTGTTTAACATGTATGATAACGAGCCAAGTACAGCCACCGTGAAGAACGATAACAGAGATCGTTTTCAAGTGCTTCGTCGATTTCAGGCAACTGTTACTGGTGGCCAGTATGCGAGCAAGGAGCAAGCAATAGTTAGGAAGTTTATGAAGGTGAACAACCATGTGACGTATAATCATCAAGAGGCTGCGAAGTATGACAATCACACAGAGAATGCTCTTTTGTTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAAATCAGAATCTATTTCTATGATTCTGTTCAGAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYVNRAVAPTVLVTNKRRSWVNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
NCBI Accession | YP_001285744.1 |
---|---|
Location | 1060-1464 |
Gene Name | AC3 |
Protein Name | REn protein |
Coding Region | ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAATGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGGCCATTCAACACCAACCACGACATCATAAAGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGTTTACGTCCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATACTTAGATAATTTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTGATCATGTATTATGGGATGTATTGGAAAACACAGAATATGTAACACATTCAAATATAATAAAATTCAATCTTTATTAA |
Protein Sequence | MDFRTGELLTATQCENGVYTWTIKNPLYFKITKHHERPFNTNHDIIKIQIQFNHNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLDNLGVISINNVIRACDHVLWDVLENTEYVTHSNIIKFNLY |
NCBI Accession | YP_001285745.1 |
---|---|
Location | 1205-1612 |
Gene Name | AC2 |
Protein Name | TrAP protein |
Coding Region | ATGCAGAATTCGTCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAAGAGGCCTGTTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGCGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAATGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGGCCATTCAACACCAACCACGACATCATAAAGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGTTTACGTCCTCAGACTTGGCGTTTCTTAAGAGTATTTAG |
Protein Sequence | MQNSSPSTAHCTQVPIKVQHRIAKKRPVRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPREAIQHQPRHHKDPNTIQPQPEESVGNTPVFSNLPDLDSFTSSDLAFLKSI |
NCBI Accession | YP_001285746.1 |
---|---|
Location | 1512-2600 |
Gene Name | AC1 |
Protein Name | rep protein |
Coding Region | ATGGCACCCCCAAAGCGTTTCCAAATAAATGCCAAGAATTATTTTCTCACTTATCCACAATGCTCCCTTACTAAAGAAGAGGCACTTTCCCAATTACAAAACCTAAACACCCCAACGAATAAAAAATACATCAAAATCTGCAGAGAGCTTCACGAAGATGGGTCTCCTCATCTCCACGTGCTTGTCCAGTTCGAAGGGAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCGCATTTCCATCCAAACATTCAGGGAGCTAAATCGAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACAATTGAATGGGGAGAATTTCAGATCGACGGACGATCTGCAAGGGGAGGTCAACAATCAGCCAACGACGCTTACGCCCAGGCGCTTAACGCAGGCAGTAAGTCGGAGGCTCTTAATGTAATTAAGGAGCTAGCTCCTAAAGATTATGTGTTACAGTTTCATAATTTAAATGCCAATTTAGACAGGATTTTTACACCTCCATTGGAGGTTTATATTTCGCCTTTTTCTTCTTCTTCTTTTGATCGAGTCCCAGAAGAACTCGAGGAGTGGGCTGCCGAGAACGTCGTCAGTTCCGCTGCGCGGCCTTTACGACCGATAAGTATAGTTATCGAAGGGGATAGTCGGACGGGGAAAACAATGTGGGCTAGGTCATTAGGCCCACATAATTATTTATGCGGACACCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGATCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAACCAATTCAAATTAAAGGTGGAATCCCAACTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCTGCTTTAAAAGATTGGGCATTAAAGAATGCAGAATTCGTCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAAGAGGCCTGTTCGGAGACGGAGAGTTGA |
Protein Sequence | MAPPKRFQINAKNYFLTYPQCSLTKEEALSQLQNLNTPTNKKYIKICRELHEDGSPHLHVLVQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGQQSANDAYAQALNAGSKSEALNVIKELAPKDYVLQFHNLNANLDRIFTPPLEVYISPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFVTLNSPLYSGTNQSATQNSQEEACSETES |
NCBI Accession | YP_001285747.1 |
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Location | 2153-2443 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGTCTCCTCATCTCCACGTGCTTGTCCAGTTCGAAGGGAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCGCATTTCCATCCAAACATTCAGGGAGCTAAATCGAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACAATTGAATGGGGAGAATTTCAGATCGACGGACGATCTGCAAGGGGAGGTCAACAATCAGCCAACGACGCTTACGCCCAGGCGCTTAACGCAGGCAGTAAGTCGGAGGCTCTTAATGTAA |
Protein Sequence | MGLLISTCLSSSKGNTNARITDSSTWYPQPGQRISIQTFRELNRAPTSSPTSTRTETQLNGENFRSTDDLQGEVNNQPTTLTPRRLTQAVSRRLLM |
1 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
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2 |
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3 |
Tobacco leaf curl Puer virus: a novel monopartite begomovirus infecting Nicotiana tabacum in China. Jiang N, et al. Arch Virol. 2022 Jan;167(1):229-232. doi: 10.1007/s00705-021-05267-9. Epub 2021 Oct 15. PMID: 34652555 |
4 |
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5 |
Emergence of Asian endemic begomoviruses as a pandemic threat. Qureshi MA, et al. Front Plant Sci. 2022 Sep 28;13:970941. doi: 10.3389/fpls.2022.970941. eCollection 2022. PMID: 36247535 |
6 |
Emergence and diversity of begomoviruses infecting solanaceous crops in East and Southeast Asia. Kenyon L, et al. Virus Res. 2014 Jun 24;186:104-13. doi: 10.1016/j.virusres.2013.12.026. Epub 2014 Jan 15. PMID: 24440320 |
7 |
A novel East African monopartite begomovirus-betasatellite complex that infects Vernonia amygdalina. Mollel HG, et al. Arch Virol. 2017 Apr;162(4):1079-1082. doi: 10.1007/s00705-016-3175-2. Epub 2016 Nov 29. PMID: 27900540 |
8 |
Green SK, et al. Plant Dis. 2001 Dec;85(12):1286. doi: 10.1094/PDIS.2001.85.12.1286A. PMID: 30831796 |
9 |
Du Z, et al. Virus Genes. 2014 Jun;48(3):557-61. doi: 10.1007/s11262-014-1043-2. Epub 2014 Feb 8. PMID: 24510306 |