Tomato yellow leaf curl Vietnam virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000873945.1 |
| Isolate | Viet Nam: Hanoi |
| Release date | 2015/2/13 |
| Submitter | Ha,C., Coombs,S., Revill,P., Harding,R., Vu,M., Dale,J., Ha,C.V., Revill,P.A., Harding,R.M., Vu,M.T., Dale,J.L. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_009548
ACCGGATGGCCGCGATTTTTTTTATGTGGTCCCCCCACTCTTATTTGTCGGCCAATAGAGACGCTCCCTCAGAGCTTATTTATTTAACGGCCCCCTATAAAACTTGGTCCCCAAGTACTCATTTCAAACATGTGGGATCCGCTTTTAAACGAATTTCCCGAAACCGTTCACGGTTTTAGGTGTATGCTAGCGATTAAATATTTGCAATTAGTAGAAAATACATACTCTCCGGATACATTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTATTCGTGCCAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAACCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGTCCCATGTACCGCAAGCCCAAGATGTACAGAATGTACAAAAGCCCTGATGTTCCACGAGGATGTGAAGGCCCATGTAAAGTCCAGTCTTATGAACAGCGTCATGATGTAGCCCATGTAGGGAAGGTAATTTGTGTGTCTGATGTTACACGTGGTAACGGGTTGACTCATCGTGTTGGTAAGAGGTTCTGTATTAAGTCAGTTTATGTTTTGGGTAAGATCTGGATGGATGAGAACATTAAGACGAAGAATCATACTAATACGGTCATGTTCTTTTTAGTACGTGATAGAAGACCTTTTGGAACTCCCCAAGATTTTGGTCAGGTGTTTAACATGTATGATAACGAGCCAAGTACAGCCACCGTGAAGAACGATAACAGAGATCGTTTTCAAGTGCTTCGTCGATTTCAGGCAACTGTTACTGGTGGCCAGTATGCGAGCAAGGAGCAAGCAATAGTTAGGAAGTTTATGAAGGTGAACAACCATGTGACGTATAATCATCAAGAGGCTGCGAAGTATGACAATCACACAGAGAATGCTCTTTTGTTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAAATCAGAATCTATTTCTATGATTCTGTTCAGAATTAATAAAGATTGAATTTTATTATATTTGAATGTGTTACATATTCTGTGTTTTCCAATACATCCCATAATACATGATCACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATCTAAGTATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGACGTAAACGAGTCCAGATCTGGAAGATTAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCTTTATGATGTCGTGGTTGGTGTTGAATGGCCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCATTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCGCAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAACAGGCCTCTTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGACGAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCAGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGGCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTTAATTTGAATTGGTTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGATCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTTGGGCTTAGATCAAGGTGTCCGCATAAATAATTATGTGGGCCTAATGACCTAGCCCACATTGTTTTCCCCGTCCGACTATCCCCTTCGATAACTATACTTATCGGTCGTAAAGGCCGCGCAGCGGAACTGACGACGTTCTCGGCAGCCCACTCCTCGAGTTCTTCTGGGACTCGATCAAAAGAAGAAGAAGAAAAAGGCGAAATATAAACCTCCAATGGAGGTGTAAAAATCCTGTCTAAATTGGCATTTAAATTATGAAACTGTAACACATAATCTTTAGGAGCTAGCTCCTTAATTACATTAAGAGCCTCCGACTTACTGCCTGCGTTAAGCGCCTGGGCGTAAGCGTCGTTGGCTGATTGTTGACCTCCCCTTGCAGATCGTCCGTCGATCTGAAATTCTCCCCATTCAATTGTGTCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTCGATTTAGCTCCCTGAATGTTTGGATGGAAATGCGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCTGGCATTTGTATTTCCCTTCGAACTGGACAAGCACGTGGAGATGAGGAGACCCATCTTCGTGAAGCTCTCTGCAGATTTTGATGTATTTTTTATTCGTTGGGGTGTTTAGGTTTTGTAATTGGGAAAGTGCCTCTTCTTTAGTAAGGGAGCATTGTGGATAAGTGAGAAAATAATTCTTGGCATTTATTTGGAAACGCTTTGGGGGTGCCATTGACTTGGTCAATCGGTACTCATCAAACTTCTCTATGCAATTGGGGAATGGTACTCAATATATAGTTGAGTACCAAATGGCATTATCGTAATTCTCAAAGGTAATTTGAAATTCAAATTGGTAAAGCGGCCATCCGTATAATATT
Gene Information
| NCBI Accession | YP_001285742.1 |
|---|---|
| Location | 130-480 |
| Gene Name | AV2 |
| Protein Name | AV2 protein |
| Coding Region | ATGTGGGATCCGCTTTTAAACGAATTTCCCGAAACCGTTCACGGTTTTAGGTGTATGCTAGCGATTAAATATTTGCAATTAGTAGAAAATACATACTCTCCGGATACATTAGGGTACGATTTAATTCGTGATTTAATTTTAGTTATTCGTGCCAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAACCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGTCCCATGTACCGCAAGCCCAAGATGTACAGAATGTACAAAAGCCCTGA |
| Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESSHVPQAQDVQNVQKP |
| NCBI Accession | YP_001285743.1 |
|---|---|
| Location | 290-1063 |
| Gene Name | AV1 |
| Protein Name | CP protein |
| Coding Region | ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAACCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGTCCCATGTACCGCAAGCCCAAGATGTACAGAATGTACAAAAGCCCTGATGTTCCACGAGGATGTGAAGGCCCATGTAAAGTCCAGTCTTATGAACAGCGTCATGATGTAGCCCATGTAGGGAAGGTAATTTGTGTGTCTGATGTTACACGTGGTAACGGGTTGACTCATCGTGTTGGTAAGAGGTTCTGTATTAAGTCAGTTTATGTTTTGGGTAAGATCTGGATGGATGAGAACATTAAGACGAAGAATCATACTAATACGGTCATGTTCTTTTTAGTACGTGATAGAAGACCTTTTGGAACTCCCCAAGATTTTGGTCAGGTGTTTAACATGTATGATAACGAGCCAAGTACAGCCACCGTGAAGAACGATAACAGAGATCGTTTTCAAGTGCTTCGTCGATTTCAGGCAACTGTTACTGGTGGCCAGTATGCGAGCAAGGAGCAAGCAATAGTTAGGAAGTTTATGAAGGTGAACAACCATGTGACGTATAATCATCAAGAGGCTGCGAAGTATGACAATCACACAGAGAATGCTCTTTTGTTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAAATCAGAATCTATTTCTATGATTCTGTTCAGAATTAA |
| Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYVNRAVAPTVLVTNKRRSWVNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
| NCBI Accession | YP_001285744.1 |
|---|---|
| Location | 1060-1464 |
| Gene Name | AC3 |
| Protein Name | REn protein |
| Coding Region | ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAATGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGGCCATTCAACACCAACCACGACATCATAAAGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGTTTACGTCCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATACTTAGATAATTTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTGATCATGTATTATGGGATGTATTGGAAAACACAGAATATGTAACACATTCAAATATAATAAAATTCAATCTTTATTAA |
| Protein Sequence | MDFRTGELLTATQCENGVYTWTIKNPLYFKITKHHERPFNTNHDIIKIQIQFNHNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLDNLGVISINNVIRACDHVLWDVLENTEYVTHSNIIKFNLY |
| NCBI Accession | YP_001285745.1 |
|---|---|
| Location | 1205-1612 |
| Gene Name | AC2 |
| Protein Name | TrAP protein |
| Coding Region | ATGCAGAATTCGTCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAAGAGGCCTGTTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGCGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAATGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGGCCATTCAACACCAACCACGACATCATAAAGATCCAAATACAATTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGTTTACGTCCTCAGACTTGGCGTTTCTTAAGAGTATTTAG |
| Protein Sequence | MQNSSPSTAHCTQVPIKVQHRIAKKRPVRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPREAIQHQPRHHKDPNTIQPQPEESVGNTPVFSNLPDLDSFTSSDLAFLKSI |
| NCBI Accession | YP_001285746.1 |
|---|---|
| Location | 1512-2600 |
| Gene Name | AC1 |
| Protein Name | rep protein |
| Coding Region | ATGGCACCCCCAAAGCGTTTCCAAATAAATGCCAAGAATTATTTTCTCACTTATCCACAATGCTCCCTTACTAAAGAAGAGGCACTTTCCCAATTACAAAACCTAAACACCCCAACGAATAAAAAATACATCAAAATCTGCAGAGAGCTTCACGAAGATGGGTCTCCTCATCTCCACGTGCTTGTCCAGTTCGAAGGGAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCGCATTTCCATCCAAACATTCAGGGAGCTAAATCGAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACAATTGAATGGGGAGAATTTCAGATCGACGGACGATCTGCAAGGGGAGGTCAACAATCAGCCAACGACGCTTACGCCCAGGCGCTTAACGCAGGCAGTAAGTCGGAGGCTCTTAATGTAATTAAGGAGCTAGCTCCTAAAGATTATGTGTTACAGTTTCATAATTTAAATGCCAATTTAGACAGGATTTTTACACCTCCATTGGAGGTTTATATTTCGCCTTTTTCTTCTTCTTCTTTTGATCGAGTCCCAGAAGAACTCGAGGAGTGGGCTGCCGAGAACGTCGTCAGTTCCGCTGCGCGGCCTTTACGACCGATAAGTATAGTTATCGAAGGGGATAGTCGGACGGGGAAAACAATGTGGGCTAGGTCATTAGGCCCACATAATTATTTATGCGGACACCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGATCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAACCAATTCAAATTAAAGGTGGAATCCCAACTATCTTCCTTTGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCTGCTTTAAAAGATTGGGCATTAAAGAATGCAGAATTCGTCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAAGAGGCCTGTTCGGAGACGGAGAGTTGA |
| Protein Sequence | MAPPKRFQINAKNYFLTYPQCSLTKEEALSQLQNLNTPTNKKYIKICRELHEDGSPHLHVLVQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGQQSANDAYAQALNAGSKSEALNVIKELAPKDYVLQFHNLNANLDRIFTPPLEVYISPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFVTLNSPLYSGTNQSATQNSQEEACSETES |
| NCBI Accession | YP_001285747.1 |
|---|---|
| Location | 2153-2443 |
| Gene Name | AC4 |
| Protein Name | AC4 protein |
| Coding Region | ATGGGTCTCCTCATCTCCACGTGCTTGTCCAGTTCGAAGGGAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCGCATTTCCATCCAAACATTCAGGGAGCTAAATCGAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACAATTGAATGGGGAGAATTTCAGATCGACGGACGATCTGCAAGGGGAGGTCAACAATCAGCCAACGACGCTTACGCCCAGGCGCTTAACGCAGGCAGTAAGTCGGAGGCTCTTAATGTAA |
| Protein Sequence | MGLLISTCLSSSKGNTNARITDSSTWYPQPGQRISIQTFRELNRAPTSSPTSTRTETQLNGENFRSTDDLQGEVNNQPTTLTPRRLTQAVSRRLLM |
References More References in PubMed
| 1 |
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| 2 |
First Report of Tomato yellow leaf curl Kanchanaburi virus Infecting Eggplant in Laos. Tang YF, et al. Plant Dis. 2014 Mar;98(3):428. doi: 10.1094/PDIS-07-13-0696-PDN. PMID: 30708424 |
| 3 |
Tobacco leaf curl Puer virus: a novel monopartite begomovirus infecting Nicotiana tabacum in China. Jiang N, et al. Arch Virol. 2022 Jan;167(1):229-232. doi: 10.1007/s00705-021-05267-9. Epub 2021 Oct 15. PMID: 34652555 |
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| 7 |
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| 8 |
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| 9 |
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