Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000840985.1 |
Isolate | Thailand: Kanchanaburi |
Release date | 2015/2/12 |
Submitter | Green,S.K., Tsai,W.S., Shih,S.L., Rezaian,M.A., Duangsong,U. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_995300.1 |
---|---|
Location | 174-1007 |
Gene Name | BV1 |
Protein Name | BV1 protein |
Coding Region | ATGAGAGTTCCAATCCGGAGGAATTCAGGTTTTAATTCTGACCGTCGTCCTTCAAATGGTTCAATCCACCGGTGGAATTACCCATATTCCGGCTATTTTGGCAGGAGGATTGGCAACCGCGTATATGGCATGCCATTTGGAAGCCGTCAAGTTCAAAGACGTGAATTTCAGCAGACTCATCGTCCTATCAAGTTTTCTGACCATGTTTCTTCTCGGAGGAAGTTTATGAAGACTATAGAGGAAATTCACGATGGCACTGACTACTTGCTTTGCAATAACATGTCCAAGGTGTCATACATTAGTTACCCTCCTCTATCCGGTACTGAACATGGTAGTAGAGCTGAATCCTATCTCAAAGTCCTGGGTTTTAATGTATCTGGGTCTGTTGTGCTGAAGCAGCTGCACATGCGTGAAGCAGATATGTCTCAAGGAATTCATGGTATATTTACCACAGTAATTGTTCGTGATAAGAGACCATGTCAGTTCTCTGCTGTGGATCCTATCATCCCATTTGTTGAGTTATTTGGACCAGAAAAGAGAGCATGCTCCACATTACATGTTAGAGATTCTTATAAGAATCGATTTAGTGTTGTCTATCAAAAGAAACATGTTGTAAATAGTGCTCTGACAACACATGTATTTAGGTATAATTTTAATGTTAAGTTTTCTAGGTTTCCTTTCTGGGTGTCTTTCAAAGACACATCCAATGCAGAGCCTACTGGACTATATTCTAATGTTTCTAAGAACGCATTGGTGGTGTACTACGTGTGGCTGTGTGATTCAAATGTAACAGCCGAAGTGCACGTACAGTATGATTTGAACTATATTGGATAA |
Protein Sequence | MRVPIRRNSGFNSDRRPSNGSIHRWNYPYSGYFGRRIGNRVYGMPFGSRQVQRREFQQTHRPIKFSDHVSSRRKFMKTIEEIHDGTDYLLCNNMSKVSYISYPPLSGTEHGSRAESYLKVLGFNVSGSVVLKQLHMREADMSQGIHGIFTTVIVRDKRPCQFSAVDPIIPFVELFGPEKRACSTLHVRDSYKNRFSVVYQKKHVVNSALTTHVFRYNFNVKFSRFPFWVSFKDTSNAEPTGLYSNVSKNALVVYYVWLCDSNVTAEVHVQYDLNYIG |
NCBI Accession | NP_995301.1 |
---|---|
Location | 1014-1847 |
Gene Name | BC1 |
Protein Name | BC1 protein |
Coding Region | ATGGAGTCCAACAATAACAGTATTGCCTATACGACGTCGGATAGGACTGAATTTCAGCTGTCCAATGAAAAAACAGAAGTCACTCTGTTGTTTCCCTCAACCGTCGATCAAAAATTATCAATGCTCCTGGGAAAGTGTCTCAGGATTGACCATGTCATCCTCCAATACAGGAACCAAGTACCTGTCAATGCAACTGGGCATGTGGTCATAGAAATGCACGACACAAGGTTACATGAAGGAGACTCAAAGCAGGCTGAGTTCACAATACCCATAGGGTGTAACTGCAATATCCACTACTACTCATCCTCATACTTCTCCCCCAAAGATCCAAATCCATGGAGGGTGCTGTACAGGGTGGACGACACTAACGTGGTCAATGGTGTTCACTTTTGTAGGATGCAAGGGAAGTTAAAAATGTCCTCTGCAAAACAGTCATCTGAAATAACATTTAAGTCCCCAAAAATTGTAATACTGTCAAAGGCATATAACATGAACCACATAGATTTCTGGCATGTGCCTCAGTCCAAGGTATCAAGGAAACCAGTACAAGCCCTATCACAAATGAGGTCACAGTCTTCCAGATACACTACAAATGCCATTCCACAAGGGCATACCTGGGCTTCAGCCAGCGCAGTGGGGAACAACGAGATAGAGGAATACCCATACAGACATTTGCATCAGCTGCAAGATGCAACTCTAGATCCTGGCCCTTCGGCATCGGAAGTTGTTGCATGTAGCAACAAAGTGAATGATGATGTAATTAATATTATTAAAAAAACAGTTGAATTATGTATGGAAGGGAGTAATGTCTCCTCAAATGTAAAAAAAATATGA |
Protein Sequence | MESNNNSIAYTTSDRTEFQLSNEKTEVTLLFPSTVDQKLSMLLGKCLRIDHVILQYRNQVPVNATGHVVIEMHDTRLHEGDSKQAEFTIPIGCNCNIHYYSSSYFSPKDPNPWRVLYRVDDTNVVNGVHFCRMQGKLKMSSAKQSSEITFKSPKIVILSKAYNMNHIDFWHVPQSKVSRKPVQALSQMRSQSSRYTTNAIPQGHTWASASAVGNNEIEEYPYRHLHQLQDATLDPGPSASEVVACSNKVNDDVINIIKKTVELCMEGSNVSSNVKKI |
NCBI Accession | NP_995302.1 |
---|---|
Location | 118-480 |
Gene Name | AV2 |
Protein Name | pre-coat protein |
Coding Region | ATGGAAAACATGTGGGATCCATTGCTACATCCTTTTCCAGAGAGTTTGCACGGCTTTAGATGTATGCTTGCAATCAAGTATCTTCAAAGCTTACAGAGTAAGTATTCTCCTGATACTCTTGGGAGTGAATTCTTGAAGGATTTCATCTGCATCTTGCGGAGTAGAAATTATGCCGAAGCGTTCAATAGATACAGTGACGTCGTTGCCAATGTCTATAACACGCCGGAGGTTAAACTTCGGGAGTCAGTACAGTCTCCCTGCCTCTGCCCCCACTGCCCCAGGCATGTCGTACAAACGAAGAGCTTGGAAAAACCGTCCTATGTACACGAAGCCACGGTTTTATCGGTGGCGAAGGAGCAGTGA |
Protein Sequence | MENMWDPLLHPFPESLHGFRCMLAIKYLQSLQSKYSPDTLGSEFLKDFICILRSRNYAEAFNRYSDVVANVYNTPEVKLRESVQSPCLCPHCPRHVVQTKSLEKPSYVHEATVLSVAKEQ |
NCBI Accession | NP_995303.1 |
---|---|
Location | 287-1063 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCGAAGCGTTCAATAGATACAGTGACGTCGTTGCCAATGTCTATAACACGCCGGAGGTTAAACTTCGGGAGTCAGTACAGTCTCCCTGCCTCTGCCCCCACTGCCCCAGGCATGTCGTACAAACGAAGAGCTTGGAAAAACCGTCCTATGTACACGAAGCCACGGTTTTATCGGTGGCGAAGGAGCAGTGATGTTCCACGGGGTTGTGAGGGTCCTTGTAAGGTTCAGTCCTTTGAGCAGAGACATGATATAACACACACCGGCAAGGTGTTGTGTGTGTCTGATGTTACTAGAGGCAATGGTATTACTCATAGAATAGGTAAAAGATTTTGCGTTAAGTCTGTTTATGTTATGGGCAAAATCTGGATGGATGAGAATATTAAATTGAAGAATCACACCAACACTGTTATGTTTTGGCTTGTTCGCGACAGAAGACCTGTTACTACCCCATATGGATTTGGAGAGTTATTCAACATGTATGACAACGAGCCCAGTACTGCAACAATAAAGAACGATCTTAGAGATCGTGTGCAAGTGCTTCATCGTTTCTCAGCATCATTAACTGGTGGTCAATATGCCAGCAAGGAACAAGCAGTTATTAAGAAGTTTTTTAGAGTTAATAATTATGTGGTGTACAATCACCAAGAAGCTGCTAAGTATGAAAATCATACTGAGAATGCTTTGCTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCAACACTTAAGATTAGAATTTATTTTTATGACAATGTAACTAATTAA |
Protein Sequence | MPKRSIDTVTSLPMSITRRRLNFGSQYSLPASAPTAPGMSYKRRAWKNRPMYTKPRFYRWRRSSDVPRGCEGPCKVQSFEQRHDITHTGKVLCVSDVTRGNGITHRIGKRFCVKSVYVMGKIWMDENIKLKNHTNTVMFWLVRDRRPVTTPYGFGELFNMYDNEPSTATIKNDLRDRVQVLHRFSASLTGGQYASKEQAVIKKFFRVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDNVTN |
NCBI Accession | NP_995304.1 |
---|---|
Location | 1060-1464 |
Gene Name | AC3 |
Protein Name | AC3 |
Coding Region | ATGGATTTACGCACAGGGGAAACCATTACTGCAGCTCAAGCGCAGAATGGCGTGTATATATGGGAAGTTCCAAATCCCCTGTATTTCAAGGTGCTGAAGCACAACAGCAAACCATTCAACGACAACAACGACTATTTGGAGATACAGATCCAATTCAACCACAACCTCAGGAAGGCGTTGGGGATTCACAAGTGTTTCCTGATCTTCAGAATATGGACTCCTTTACAACCTCAGACCTGGCATTTCTTAAGAGTATTTAAAAATCAATGTATGAAATATTTGAATAACTTAGGTATAGTTTCAATTAACAATGTAATACGCGCAGCTGATTATGTATTGTGGGATGTATTGGAAAATACAAGTTATGTAGACCAATGTCATATAATAAAATTCAACATTTATTAA |
Protein Sequence | MDLRTGETITAAQAQNGVYIWEVPNPLYFKVLKHNSKPFNDNNDYLEIQIQFNHNLRKALGIHKCFLIFRIWTPLQPQTWHFLRVFKNQCMKYLNNLGIVSINNVIRAADYVLWDVLENTSYVDQCHIIKFNIY |
NCBI Accession | NP_995305.1 |
---|---|
Location | 1205-1612 |
Gene Name | AC2 |
Protein Name | AC2 |
Coding Region | ATGCAGAATTCGTCACCCTCCAACAGCCACTCTACAATTGTACCAGTCAAAGTACAACATAAAATTGCAAAGAAAAAAATACCAAGAAGACGCAGAGTAGACTTAGATTGTGGCTGTTCGTATTACGTAAACATTAATTGTCACAAATATGGATTTACGCACAGGGGAAACCATTACTGCAGCTCAAGCGCAGAATGGCGTGTATATATGGGAAGTTCCAAATCCCCTGTATTTCAAGGTGCTGAAGCACAACAGCAAACCATTCAACGACAACAACGACTATTTGGAGATACAGATCCAATTCAACCACAACCTCAGGAAGGCGTTGGGGATTCACAAGTGTTTCCTGATCTTCAGAATATGGACTCCTTTACAACCTCAGACCTGGCATTTCTTAAGAGTATTTAA |
Protein Sequence | MQNSSPSNSHSTIVPVKVQHKIAKKKIPRRRRVDLDCGCSYYVNINCHKYGFTHRGNHYCSSSAEWRVYMGSSKSPVFQGAEAQQQTIQRQQRLFGDTDPIQPQPQEGVGDSQVFPDLQNMDSFTTSDLAFLKSI |
NCBI Accession | NP_995306.1 |
---|---|
Location | 1551-2600 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGCCTTCTCTAAATAAATTCAGAATAAATGCCAAAAACTATTTTCTCACATATCCTCAGTGCTCTCTGAGCAAGGAAGAAACCCTCTCTCAATTGAAGGAACTACAAACCCCAACCTCAAAAAAATATATCAAAATCTGCAGGGAGTTACACGAAGATGGGAGCCCTCATCTCCATGTGCTCATTCAATTCGAAGGGAAATTCCAGTGCAAAAATAACAGATTCTTCGACCTGGTTTCCCCAACCAGATCAGCACATTTCCATCCAAATGTTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTATTTGGAGAAGGACGGAGATACAATTGAATGGGGAGAATTCCAGGTTGATGGAAGATCTGCTAGAGGCGGACAACAATCCGCCAATGACGCATACGCAAAGGCAATTAACTGCGGAAGTAAGTCGGAGGCTCTTGCAGTCCTTAAGGAATTAGCTCCAAAGGACTATGTACTGCAGTACCACAACCTAAATGCTAATTTGGACCGGATATTTGCCCCAATCCAAGAATTATTTGTTAATCCTTACGAATTGTCGTCTTTCAATCAAGTTCCAAAAGAACTTGCCTCCTGGGCTGAGAAAAATGTATGTGATGCCGCTGCGCGGCCGTGGAGACCCATAGGAATGGTGATTGAAGGTGAATCTAGAACCGGCAAAACAATGTGGGCCAGATCATTGGGCCCTCATAATTATTTGTGTGGACATCTAGACCTTAGCCCAAAAGTGTACAGCAATGATGCTTGGTATAACGTCATTGATGACGTAGATCCGCATTATCTAAAGCACTTAAAAGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAATACAAAGTACGGTAAACCAATTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCTGGTCCATCTTCCTCTTTTAAGGAGTTTTTGGACGAACCAAAAAATGAGGCATTAAAAAATTGGGCTTTGAAAAATGCAGAATTCGTCACCCTCCAACAGCCACTCTACAATTGTACCAGTCAAAGTACAACATAA |
Protein Sequence | MPSLNKFRINAKNYFLTYPQCSLSKEETLSQLKELQTPTSKKYIKICRELHEDGSPHLHVLIQFEGKFQCKNNRFFDLVSPTRSAHFHPNVQGAKSSSDVKSYLEKDGDTIEWGEFQVDGRSARGGQQSANDAYAKAINCGSKSEALAVLKELAPKDYVLQYHNLNANLDRIFAPIQELFVNPYELSSFNQVPKELASWAEKNVCDAAARPWRPIGMVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHLKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPSSSFKEFLDEPKNEALKNWALKNAEFVTLQQPLYNCTSQSTT |
NCBI Accession | NP_995307.1 |
---|---|
Location | 2141-2443 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGGGAGCCCTCATCTCCATGTGCTCATTCAATTCGAAGGGAAATTCCAGTGCAAAAATAACAGATTCTTCGACCTGGTTTCCCCAACCAGATCAGCACATTTCCATCCAAATGTTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTATTTGGAGAAGGACGGAGATACAATTGAATGGGGAGAATTCCAGGTTGATGGAAGATCTGCTAGAGGCGGACAACAATCCGCCAATGACGCATACGCAAAGGCAATTAACTGCGGAAGTAAGTCGGAGGCTCTTGCAGTCCTTAAGGAATTAG |
Protein Sequence | MGALISMCSFNSKGNSSAKITDSSTWFPQPDQHISIQMFRELNQAPTSSPIWRRTEIQLNGENSRLMEDLLEADNNPPMTHTQRQLTAEVSRRLLQSLRN |
1 |
An JW, et al. Virus Res. 2021 Jan 2;291:198192. doi: 10.1016/j.virusres.2020.198192. Epub 2020 Oct 13. PMID: 33058965 |
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2 |
First Report of Tomato yellow leaf curl Kanchanaburi virus Infecting Eggplant in Laos. Tang YF, et al. Plant Dis. 2014 Mar;98(3):428. doi: 10.1094/PDIS-07-13-0696-PDN. PMID: 30708424 |
3 |
Koeda S, et al. Plant Dis. 2020 Dec;104(12):3221-3229. doi: 10.1094/PDIS-03-20-0613-RE. Epub 2020 Oct 12. PMID: 33044916 |
4 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
5 |
Tsai WS, et al. Plant Dis. 2006 Feb;90(2):247. doi: 10.1094/PD-90-0247B. PMID: 30786428 |
6 |
Incidence and Molecular Identification of Begomoviruses Infecting Tomato and Pepper in Myanmar. Kwak HR, et al. Plants (Basel). 2022 Apr 10;11(8):1031. doi: 10.3390/plants11081031. PMID: 35448759 |
7 |
Green SK, et al. Plant Dis. 2003 Apr;87(4):446. doi: 10.1094/PDIS.2003.87.4.446A. PMID: 30831844 |
8 |
A New Geminivirus Associated with a Yellow Leaf Curl Disease of Pepper in Thailand. Samretwanich K, et al. Plant Dis. 2000 Sep;84(9):1047. doi: 10.1094/PDIS.2000.84.9.1047D. PMID: 30832019 |
9 |
Mahmoudieh M, et al. J Appl Genet. 2020 Dec;61(4):619-628. doi: 10.1007/s13353-020-00574-4. Epub 2020 Aug 17. PMID: 32808206 |
10 |
Lestari SM, et al. Arch Insect Biochem Physiol. 2023 Feb;112(2):e21984. doi: 10.1002/arch.21984. Epub 2022 Nov 17. PMID: 36397643 |