Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000869285.1 |
Isolate | Indonesia:Lembang |
Release date | 2015/2/13 |
Submitter | Tsai,W.S., Shih,S.L., Green,S.K., Akkermans,D., Jan,F.-J. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_699989.1 |
---|---|
Location | 167-517 |
Gene Name | V2 |
Protein Name | precoat protein |
Coding Region | ATGTGGGATCCTCTTTTAAACGAATTTCCGGATTCTGTTCACGGTTTTCGGTGTATGCTCGCAATAAAGTATTTGCAAGGCGTTGAAGCAACCTACGCCCCTGATACTGTCGGTTACGACCTAGTTCGAGATCTGATCTCAGTTGTTCGTGCGAGCAATTATGCTGAAGCGTGCCGGAGATATAGCCTTTTCCGGTCCCGTATCGAAAGTACGCCGTCGTCTCAATTACGACAGCCCAGGTACCAGCCGTGCTGCTGTACTCACTGCCCTCGGCATAAATCGAAAGAAGTCTTGGACTTCTCGGCCTATGTACCGGAAGCCCAGGATTTACCGGATGTACCGAACAGCTGA |
Protein Sequence | MWDPLLNEFPDSVHGFRCMLAIKYLQGVEATYAPDTVGYDLVRDLISVVRASNYAEACRRYSLFRSRIESTPSSQLRQPRYQPCCCTHCPRHKSKEVLDFSAYVPEAQDLPDVPNS |
NCBI Accession | YP_699990.1 |
---|---|
Location | 327-1100 |
Gene Name | V1 |
Protein Name | coat protein |
Coding Region | ATGCTGAAGCGTGCCGGAGATATAGCCTTTTCCGGTCCCGTATCGAAAGTACGCCGTCGTCTCAATTACGACAGCCCAGGTACCAGCCGTGCTGCTGTACTCACTGCCCTCGGCATAAATCGAAAGAAGTCTTGGACTTCTCGGCCTATGTACCGGAAGCCCAGGATTTACCGGATGTACCGAACAGCTGATGTCCCTAGGGGATGTGAAGGTCCTTGCAAGATTCAATCCTTTGAATCTCGACATGATATTGCTCACACCGGTAAGGTTATGTGTGTGACGGATGTTACTCGTGGCGGTGGTTTAACCCACCGTACTGGGAAGAGATTTTGCGTTAAGTCCCTCTATATCCTTGGCAAAATCTGGATGGATGAAAATATCAAGACTAAGAATCACACTAACACGGTCATGTTCTATGTTGTTCGGGATCGTAGACCCTATGGTACTCCTCAAGATTTTGGACAAGTGTTTAACATGTTCGATAACGAACCTAGCACTGCAACTGTCAAGAATGATCTTCGAGATCGGTTTCAAGTTTTGCGGAAGTTCACGGCAACTGTTGTTGGTGGTCAGTATGCTTGTAAGGAACAAACGTTAGTTAGGAAGTTCATGAGATTGAACAATTATGTTGTTTACAACCATCAGGAAACCGCAAAATATGAGAATCATACAGAGAATGCTCTGTTATTGTACATGGCATCTACGCATGCCTCTAACCCTGTGTATGCAACTTTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAA |
Protein Sequence | MLKRAGDIAFSGPVSKVRRRLNYDSPGTSRAAVLTALGINRKKSWTSRPMYRKPRIYRMYRTADVPRGCEGPCKIQSFESRHDIAHTGKVMCVTDVTRGGGLTHRTGKRFCVKSLYILGKIWMDENIKTKNHTNTVMFYVVRDRRPYGTPQDFGQVFNMFDNEPSTATVKNDLRDRFQVLRKFTATVVGGQYACKEQTLVRKFMRLNNYVVYNHQETAKYENHTENALLLYMASTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | YP_699991.1 |
---|---|
Location | 1097-1501 |
Gene Name | C3 |
Protein Name | C3 protein |
Coding Region | ATGGATTTACGCACAGGGGAGTACATCACTGCAGCTCAAGCCAGGAATGGCGTCTATATTTGGGAGATTCAAAATCCCCTCTATTTCAAGATACTCAGCCATCACAGCCGGCCGTTCAACACGAACCACGACGTGATAACAATACGGCTGCAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCGGTGTTTTCTGACGTTCCAAGTTTGGACTTACTTACACCCTCCGACTGGGCTTTTCTTAAAAGTCTTTAAGACTCAATGTATTAAATACTTGAATAATTTAGGTGTAATTTCAATTAATAATGTAATTAGAGCTGTAGACCATGTCTTGTTTAAAGTGCTAGAACGCACTATTGATGTACAACCAGATTATGAAATAAAATTCAACATTTATTAA |
Protein Sequence | MDLRTGEYITAAQARNGVYIWEIQNPLYFKILSHHSRPFNTNHDVITIRLQFNHNLRKALGIHRCFLTFQVWTYLHPPTGLFLKVFKTQCIKYLNNLGVISINNVIRAVDHVLFKVLERTIDVQPDYEIKFNIY |
NCBI Accession | YP_699992.1 |
---|---|
Location | 1242-1649 |
Gene Name | C2 |
Protein Name | C2 protein |
Coding Region | ATGCAGAATTCATCACCCTCGAGAGACCACTGTACTCAGGTTCCCATCAAAGTCCAGCACCGGATTGCTAAAAAGAAGATAATAAGACGACGGCGGGTAGACCTTAATTGCGGTTGCTCATACTACGTGTCAATAAACTGTGCTAATCATGGATTTACGCACAGGGGAGTACATCACTGCAGCTCAAGCCAGGAATGGCGTCTATATTTGGGAGATTCAAAATCCCCTCTATTTCAAGATACTCAGCCATCACAGCCGGCCGTTCAACACGAACCACGACGTGATAACAATACGGCTGCAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACACCGGTGTTTTCTGACGTTCCAAGTTTGGACTTACTTACACCCTCCGACTGGGCTTTTCTTAAAAGTCTTTAA |
Protein Sequence | MQNSSPSRDHCTQVPIKVQHRIAKKKIIRRRRVDLNCGCSYYVSINCANHGFTHRGVHHCSSSQEWRLYLGDSKSPLFQDTQPSQPAVQHEPRRDNNTAAVQPQPEESVGNTPVFSDVPSLDLLTPSDWAFLKSL |
NCBI Accession | YP_699993.1 |
---|---|
Location | 1579-2667 |
Gene Name | C1 |
Protein Name | replication-associated protein |
Coding Region | ATGGAGAGCAATCGGGGAACCCCCTCTAATAACTCTCTCACAAAGCGTTTTCAAATAAACGCTAAAAACTATTTCCTCACCTATCCTCACTGCTCTCTCTCTAAAAGCGAAGCTCTCTCTCAAATTAGAAATTTGAATACCCCAACAAATAAAAAATATATCAAAATCTGCTCAGAGCTTCACGAGGATGGGGAACCACATCTCCATGTGCTTATCCAATTTGAGGGTAAGTTCAAGACAAAGAACAAGAGGTTCTTCGATCTGGTATCCCCAACCAGATCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAAGCATATATCGAAAAGGATGGTGATACCCTTGAATGGGGTACCTTCCAAATAGATGGAAGATCTTCAAGAGGCGGAAAGCAATCCGCTAACGACGCTTATGCAAAAGCTATGAATGCAGGAAACAAAGCGGAGGCTCTGAATATTCTTAAAGAACTTGCGCCTAAAGATTACATCTTGCAGTTTCATAACTTGAACACAAATCTTGACAAGATCTTCATGACTCCGCAACCAGTCTTTACCTCTCCATTCTTATCTTCATCCTTTGACCAGGTTCCTGAAGAACTTGAAGAATGGGTCGCCGAGAACATAGTCGACCCCGCTGCGCGGCCATTAAGACCAAAGAGTCTGGTGTTACAAGGTGATAGTCGTACAGGTAAAACCATGTGGGCTAGATCGCTTGGTAGGCACAATTACTTGTGCGGCCATCTAGATCTCAATCCTAGGGTTTACTCAAATGACGCATGGTATAACGTCATTGATGACGTCGATCCGCATTACCTAAAGCACTTTAAAGAGTTTATGGGGGCCCAGATGGACTGGCAAAGCAATACAAAGTATGGTAGACCCATTCAAATTAAAGGCGGGATACCGACCATCTTTTTATGTAATGCTGGACCCACATCTTCATATAAAGAGTTTTTAGACGAACCTAAAAACATCGCACTTAAAAATTGGTCTCTTCATAATGCAGAATTCATCACCCTCGAGAGACCACTGTACTCAGGTTCCCATCAAAGTCCAGCACCGGATTGCTAA |
Protein Sequence | MESNRGTPSNNSLTKRFQINAKNYFLTYPHCSLSKSEALSQIRNLNTPTNKKYIKICSELHEDGEPHLHVLIQFEGKFKTKNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKAYIEKDGDTLEWGTFQIDGRSSRGGKQSANDAYAKAMNAGNKAEALNILKELAPKDYILQFHNLNTNLDKIFMTPQPVFTSPFLSSSFDQVPEELEEWVAENIVDPAARPLRPKSLVLQGDSRTGKTMWARSLGRHNYLCGHLDLNPRVYSNDAWYNVIDDVDPHYLKHFKEFMGAQMDWQSNTKYGRPIQIKGGIPTIFLCNAGPTSSYKEFLDEPKNIALKNWSLHNAEFITLERPLYSGSHQSPAPDC |
NCBI Accession | YP_699994.1 |
---|---|
Location | 2283-2480 |
Gene Name | C4 |
Protein Name | C4 protein |
Coding Region | ATGGGGAACCACATCTCCATGTGCTTATCCAATTTGAGGGTAAGTTCAAGACAAAGAACAAGAGGTTCTTCGATCTGGTATCCCCAACCAGATCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGATGTCAAAGCATATATCGAAAAGGATGGTGATACCCTTGAATGGGGTACCTTCCAAATAG |
Protein Sequence | MGNHISMCLSNLRVSSRQRTRGSSIWYPQPDQHISIRTFRELNQAPMSKHISKRMVIPLNGVPSK |
1 |
Kesumawati E, et al. Arch Virol. 2019 Sep;164(9):2379-2383. doi: 10.1007/s00705-019-04316-8. Epub 2019 Jun 15. PMID: 31203434 |
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2 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
3 |
Koeda S, et al. Plant Dis. 2020 Dec;104(12):3221-3229. doi: 10.1094/PDIS-03-20-0613-RE. Epub 2020 Oct 12. PMID: 33044916 |
4 |
Neriya Y, et al. Microbiol Resour Announc. 2020 Jun 18;9(25):e00486-20. doi: 10.1128/MRA.00486-20. PMID: 32554790 |
5 |
Tsai WS, et al. Plant Dis. 2009 Mar;93(3):321. doi: 10.1094/PDIS-93-3-0321C. PMID: 30764201 |
6 |
Tsai WS, et al. Plant Dis. 2006 Feb;90(2):247. doi: 10.1094/PD-90-0247B. PMID: 30786428 |
7 |
First Report of Pepper yellow leaf curl Indonesia virus in Ageratum conyzoides in Indonesia. Shibuya Y, et al. Plant Dis. 2007 Sep;91(9):1198. doi: 10.1094/PDIS-91-9-1198B. PMID: 30780641 |
8 |
Sakata JJ, et al. Arch Virol. 2008;153(12):2307-13. doi: 10.1007/s00705-008-0254-z. Epub 2008 Nov 18. PMID: 19015934 |
9 |
Kon T, et al. Arch Virol. 2007;152(6):1147-57. doi: 10.1007/s00705-006-0928-3. Epub 2007 Feb 12. PMID: 17294343 |
10 |
Tsai WS, et al. Plant Dis. 2006 Jun;90(6):831. doi: 10.1094/PD-90-0831B. PMID: 30781263 |