Tomato yellow leaf curl Guangdong virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000868505.1
Isolate China: Guangdong, Guangzhou
Release date 2015/2/13
Submitter He,Z.F., Yu,H.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_008374
ACCGGATGGCCGCGATTTTTTTATGGTGGTCCCCCCGCACTAACTTTTGTCGGCCAATAGAAACGCTCCCTCAAAGCTTAATTATGTAATGGTCCCCTATAAAACTTGGTCCCCAAGTACTCACTGTAAACATGTGGGATCCGCTTTTAAACGAGTTCCCTGAAACCGTACATGGTTTTAGGTGTATGCTAGCGATTAAGTATTTACAATTAGTAGAAAATACATACTCGCCTGATACGTTAGGATACGATTTAATACGTGATTTAATATTGGTCATTCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCTTCCAAGGTGCGTCGCCGGTTGAACTTCGACAGCCCTTATGTCAGCCGTGCTGCTGTCCCCACTGTCCTCGTCACAAACAAAAGGAGATCATGGGTGAATCGGCCCATGTATCGAAAGCCCAAGATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGAGGTTGTGAAGGTCCATGTAAAGTCCAGTCTTATGAACAGCGTCATGATGTTGTCCATGTAGGCAAGGTCATTTGTGTGTCTGATGTTACTCGTGGTAATGGGTTGACTCATCGTGTTGGGAAGGGGTTTTGTGTCAAGTCTGTGTATGTTTTAGGTAAAATATGGATGGATGAGAATATTAAGACCAAAAATCACACTAACACTGTGATGTTCTTTTTAGTTCGTGATAGAAGACCCTTTGGCACTCCTCAGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCAAGTACAGCAACTGTTAAGAATGATAACAGAGATCGTTTTCAAGTTCTCCGTCGATTTCAAGCGACTGTCACCGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAGTTTATGAAGGTGAATAATCATGTAACTTATAACCATCAGGAGGCTGCGAAGTATGACAACCATACTGAGAATGCTCTTTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAAATCAGGATCTATTTTTATGATTCTGTTCAGAATTAATAAAGATTGAATTTTATTATACTTGACAATTTTGTTTCAATTGTCCCTTCCAATACATCATACAATACATGTGAAATTGCTCTAATTACATTGTTGATACTAATCACTCCTAAATTTCCTAAATATTTCATACATTGATACTTAAATACTCTTAAGAAATGCGAGGTCTGAGGATGTAAACGAGTCCAGATTTGGCAGGTTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTAATTGAATTGTATTTGGACGGTTATGATATCGTGGTTCCTCAGGAATGGTCTCTCTAGGTGTTGGGTTATCTTGAAATAGAGGGGATTGTTGATTGTCCAGGTATATACGCCATTCTCTGCTTGAGTTGCAGTGATGAGTTCCCCTGTGCGAAAATCCATGTGATGCGCAGTTAATTCCAAAATAGTAAGAGCATCCACAATCGAGATCAACTCTACGTCTGCGAACTGGTCTCTTCTTCGCGATTTTGTGTTGGACCTTGATCGGTACTTGAGTACAATGGCTCCGTGAGGGTGACGAATGTTGCATTTTTTAATGCCCAGTTTTTGAGTGCTGCGTTCTTTTCTTCGTCCAAGTATTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATTGACGGGATACCGCCTTTAATTTGAATTGGCTTTCCATACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAATGCTTTAGATAGTGGGGATCTACGTCATCAATGACGTTATACCAAGCATCATTGCTGTATACTTTTGGACTGAGATCTAGATGGCCACACAAATAATTGTGTAGACCCAGAGACCTTGCCCACGTCGTCTTCCCTGTACGACTATCACCCTCTATGACAATACTATTGGGTCTCCATGGCCGCGCAGCTGCATTCATGACATTTTCGGAAACCCATTCCTCAAGTTCTTCTGGAACTTGATCAAAAGAAGAAGATAAAAAAGGAGAAATATAAACCTCTAATGGAGGTGTAAAAATCCTATCCAAATTATTAGTTAAATTATGAAATTGTAAAACAAAATCTTTGGGAGCTTTCTCCCTTAATATATTGAGGGCCGCAGCTTTGGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCCGATCTTCCATCGATCTGGAAAACTCCATGATCAAGCACGTCTCTGTCTTTTTCCATGTAGGACTTAACATCTGTTGAGCTCTTAGCGCTCTGAATGTTCGGATGGAAATGTGTTGACCTGGTTGGGGATATGAGATCGAAGAATCTGTTGTTTTGGCATTTGAACTTTCCTTCGAATTGGATGAGGATATGCAGGTGAGGAGTCCCATCTTCGTGTAGTTCCCTGCAGATTCGAATGAATAATTTATTGGTTGGGGTTGATAGGGCTAATAATTGGGAAAGTGCTTCTTCTTTGCTAAGCGAGCAGTGTGGGTATGTGAGGAAATAGTTCTTGGCATTTATTATAAATTTTTTTGGCGGAGGCATATTGACTTGGTCAATCGGGTCCTCTCAAACTTGTCTATGCAATTGGGGAATGGGTCCTTATTTATATGTGAGGACCTAAATGGCACAATTGTAATTATGCATACGAAATTCAAATTGGTAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_764449.1
Location 132-482
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCGCTTTTAAACGAGTTCCCTGAAACCGTACATGGTTTTAGGTGTATGCTAGCGATTAAGTATTTACAATTAGTAGAAAATACATACTCGCCTGATACGTTAGGATACGATTTAATACGTGATTTAATATTGGTCATTCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCTTCCAAGGTGCGTCGCCGGTTGAACTTCGACAGCCCTTATGTCAGCCGTGCTGCTGTCCCCACTGTCCTCGTCACAAACAAAAGGAGATCATGGGTGAATCGGCCCATGTATCGAAAGCCCAAGATGTACAGGATGTACAAAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHSRFQGASPVELRQPLCQPCCCPHCPRHKQKEIMGESAHVSKAQDVQDVQKP

NCBI Accession YP_764450.1
Location 292-1065
Gene Name AV1
Protein Name capsid protein
Coding Region ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCTTCCAAGGTGCGTCGCCGGTTGAACTTCGACAGCCCTTATGTCAGCCGTGCTGCTGTCCCCACTGTCCTCGTCACAAACAAAAGGAGATCATGGGTGAATCGGCCCATGTATCGAAAGCCCAAGATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGAGGTTGTGAAGGTCCATGTAAAGTCCAGTCTTATGAACAGCGTCATGATGTTGTCCATGTAGGCAAGGTCATTTGTGTGTCTGATGTTACTCGTGGTAATGGGTTGACTCATCGTGTTGGGAAGGGGTTTTGTGTCAAGTCTGTGTATGTTTTAGGTAAAATATGGATGGATGAGAATATTAAGACCAAAAATCACACTAACACTGTGATGTTCTTTTTAGTTCGTGATAGAAGACCCTTTGGCACTCCTCAGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCAAGTACAGCAACTGTTAAGAATGATAACAGAGATCGTTTTCAAGTTCTCCGTCGATTTCAAGCGACTGTCACCGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAGTTTATGAAGGTGAATAATCATGTAACTTATAACCATCAGGAGGCTGCGAAGTATGACAACCATACTGAGAATGCTCTTTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAAATCAGGATCTATTTTTATGATTCTGTTCAGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYVSRAAVPTVLVTNKRRSWVNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVVHVGKVICVSDVTRGNGLTHRVGKGFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession YP_764451.1
Location 1062-1466
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTTCGCACAGGGGAACTCATCACTGCAACTCAAGCAGAGAATGGCGTATATACCTGGACAATCAACAATCCCCTCTATTTCAAGATAACCCAACACCTAGAGAGACCATTCCTGAGGAACCACGATATCATAACCGTCCAAATACAATTCAATTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCGTTTACATCCTCAGACCTCGCATTTCTTAAGAGTATTTAAGTATCAATGTATGAAATATTTAGGAAATTTAGGAGTGATTAGTATCAACAATGTAATTAGAGCAATTTCACATGTATTGTATGATGTATTGGAAGGGACAATTGAAACAAAATTGTCAAGTATAATAAAATTCAATCTTTATTAA
Protein Sequence MDFRTGELITATQAENGVYTWTINNPLYFKITQHLERPFLRNHDIITVQIQFNYNLRKALGIHKCFLTCQIWTRLHPQTSHFLRVFKYQCMKYLGNLGVISINNVIRAISHVLYDVLEGTIETKLSSIIKFNLY

NCBI Accession YP_764452.1
Location 1207-1614
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAACATTCGTCACCCTCACGGAGCCATTGTACTCAAGTACCGATCAAGGTCCAACACAAAATCGCGAAGAAGAGACCAGTTCGCAGACGTAGAGTTGATCTCGATTGTGGATGCTCTTACTATTTTGGAATTAACTGCGCATCACATGGATTTTCGCACAGGGGAACTCATCACTGCAACTCAAGCAGAGAATGGCGTATATACCTGGACAATCAACAATCCCCTCTATTTCAAGATAACCCAACACCTAGAGAGACCATTCCTGAGGAACCACGATATCATAACCGTCCAAATACAATTCAATTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCGTTTACATCCTCAGACCTCGCATTTCTTAAGAGTATTTAA
Protein Sequence MQHSSPSRSHCTQVPIKVQHKIAKKRPVRRRRVDLDCGCSYYFGINCASHGFSHRGTHHCNSSREWRIYLDNQQSPLFQDNPTPRETIPEEPRYHNRPNTIQLQPEESVGDTQMFSNLPNLDSFTSSDLAFLKSI

NCBI Accession YP_764453.1
Location 1520-2602
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGCCTCCGCCAAAAAAATTTATAATAAATGCCAAGAACTATTTCCTCACATACCCACACTGCTCGCTTAGCAAAGAAGAAGCACTTTCCCAATTATTAGCCCTATCAACCCCAACCAATAAATTATTCATTCGAATCTGCAGGGAACTACACGAAGATGGGACTCCTCACCTGCATATCCTCATCCAATTCGAAGGAAAGTTCAAATGCCAAAACAACAGATTCTTCGATCTCATATCCCCAACCAGGTCAACACATTTCCATCCGAACATTCAGAGCGCTAAGAGCTCAACAGATGTTAAGTCCTACATGGAAAAAGACAGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTGCGGCCCTCAATATATTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAATTTCATAATTTAACTAATAATTTGGATAGGATTTTTACACCTCCATTAGAGGTTTATATTTCTCCTTTTTTATCTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAGGAATGGGTTTCCGAAAATGTCATGAATGCAGCTGCGCGGCCATGGAGACCCAATAGTATTGTCATAGAGGGTGATAGTCGTACAGGGAAGACGACGTGGGCAAGGTCTCTGGGTCTACACAATTATTTGTGTGGCCATCTAGATCTCAGTCCAAAAGTATACAGCAATGATGCTTGGTATAACGTCATTGATGACGTAGATCCCCACTATCTAAAGCATTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTATGGAAAGCCAATTCAAATTAAAGGCGGTATCCCGTCAATCTTCCTTTGCAATCCAGGACCAACATCATCATATAAAGAATACTTGGACGAAGAAAAGAACGCAGCACTCAAAAACTGGGCATTAAAAAATGCAACATTCGTCACCCTCACGGAGCCATTGTACTCAAGTACCGATCAAGGTCCAACACAAAATCGCGAAGAAGAGACCAGTTCGCAGACGTAG
Protein Sequence MPPPKKFIINAKNYFLTYPHCSLSKEEALSQLLALSTPTNKLFIRICRELHEDGTPHLHILIQFEGKFKCQNNRFFDLISPTRSTHFHPNIQSAKSSTDVKSYMEKDRDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKAAALNILREKAPKDFVLQFHNLTNNLDRIFTPPLEVYISPFLSSSFDQVPEELEEWVSENVMNAAARPWRPNSIVIEGDSRTGKTTWARSLGLHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPSIFLCNPGPTSSYKEYLDEEKNAALKNWALKNATFVTLTEPLYSSTDQGPTQNREEETSSQT

NCBI Accession YP_764454.1
Location 2152-2445
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGACTCCTCACCTGCATATCCTCATCCAATTCGAAGGAAAGTTCAAATGCCAAAACAACAGATTCTTCGATCTCATATCCCCAACCAGGTCAACACATTTCCATCCGAACATTCAGAGCGCTAAGAGCTCAACAGATGTTAAGTCCTACATGGAAAAAGACAGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTGCGGCCCTCAATATATTAA
Protein Sequence MGLLTCISSSNSKESSNAKTTDSSISYPQPGQHISIRTFRALRAQQMLSPTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY

References More References in PubMed

1

Hrip1 enhances tomato resistance to yellow leaf curl virus by manipulating the phenylpropanoid biosynthesis and plant hormone pathway.

Dong Y, et al.  3 Biotech. 2023 Jan;13(1):11. doi: 10.1007/s13205-022-03426-6. Epub 2022 Dec 16.

PMID: 36532856
2

Tomato yellow leaf curl viruses: ménage à trois between the virus complex, the plant and the whitefly vector.

Díaz-Pendón JA, et al.  Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x.

PMID: 20618703
3

First Report of Tomato yellow leaf curl Kanchanaburi virus Infecting Eggplant in Laos.

Tang YF, et al.  Plant Dis. 2014 Mar;98(3):428. doi: 10.1094/PDIS-07-13-0696-PDN.

PMID: 30708424
4

C4, the Pathogenic Determinant of Tomato Leaf Curl Guangdong Virus, May Suppress Post-transcriptional Gene Silencing by Interacting With BAM1 Protein.

Li Z, et al.  Front Microbiol. 2020 May 5;11:851. doi: 10.3389/fmicb.2020.00851. eCollection 2020.

PMID: 32431688
5

Effects of Isaria fumosorosea on TYLCV (Tomato Yellow Leaf Curl Virus) Accumulation and Transmitting Capacity of Bemisia tabaci.

Zhang B, et al.  PLoS One. 2016 Oct 7;11(10):e0164356. doi: 10.1371/journal.pone.0164356. eCollection 2016.

PMID: 27716852
6

Apoptotic neurodegeneration in whitefly promotes the spread of TYLCV.

Wang S, et al.  Elife. 2020 Jul 30;9:e56168. doi: 10.7554/eLife.56168.

PMID: 32729829
7

Molecular characterization of a novel bipartite begomovirus isolated from Lycianthes biflora in China.

Tang YF, et al.  Arch Virol. 2017 Aug;162(8):2473-2476. doi: 10.1007/s00705-017-3333-1. Epub 2017 Apr 25.

PMID: 28444537
8

Isolation and molecular characterization of a distinct begomovirus and its associated betasatellite infecting Hedyotis uncinella (Hook. et Arn.) in Vietnam.

Du Z, et al.  Virus Genes. 2014 Jun;48(3):557-61. doi: 10.1007/s11262-014-1043-2. Epub 2014 Feb 8.

PMID: 24510306