Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000862185.1 |
Release date | 2015/2/13 |
Submitter | Yin,Q., Yang,H., Gong,Q., Wang,H., Liu,Y., Hong,Y., Tien,P. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_660164.1 |
---|---|
Location | 133-480 |
Gene Name | AV1 |
Protein Name | AV1 protein |
Coding Region | ATGTGGGATCCATTGCTTAATGAGTTTCCTGAAACCGTGCACGGTTTTAGGTGCATGTTAGCAATTAAGTATTTGCAGTTAGTCGAAAATACATACTCCCCCGATACATTAGGTTACGATTTAATTCGTGATTTAATTTCAGTTATTCGTGCTAGAGATTATGGCGAAACGTCCCGCCGATATTGTCATTTCCACTCCCGCCTCGAAGGTGCGTCGCCGGCTGAACTTCGACAGCCCCTATACGGGTCGTGTTGCTGCCCCCACTGTCCGCGTCACCAGAAGACAAATGTGGTCAAACAGGCCCATGTACCGGAAGCCCATGATGTACCGGATGTACAGAAGCCCTGA |
Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLISVIRARDYGETSRRYCHFHSRLEGASPAELRQPLYGSCCCPHCPRHQKTNVVKQAHVPEAHDVPDVQKP |
NCBI Accession | NP_660165.1 |
---|---|
Location | 293-1063 |
Gene Name | AV2 |
Protein Name | coat protein |
Coding Region | ATGGCGAAACGTCCCGCCGATATTGTCATTTCCACTCCCGCCTCGAAGGTGCGTCGCCGGCTGAACTTCGACAGCCCCTATACGGGTCGTGTTGCTGCCCCCACTGTCCGCGTCACCAGAAGACAAATGTGGTCAAACAGGCCCATGTACCGGAAGCCCATGATGTACCGGATGTACAGAAGCCCTGATGTTCCAAGGGGTTGTGAAGGCCCATGTAAAGTTCAATCATGTGAGGCCCGTCATGATGTTTCACATACTGGTAAGGTTATTTGTGTATCGGATGTTACTCGTGGTAACGGTATTACTCACCGTGTTGGCAAGAGGTTCTGTGTTAAATCCATTTACGTCATTGGGAAAATATGGATGGACGAAAATATTAAATTTAAGAATCATACAAATACAGTAATGTTTTTTCTTGTTAGAGATCGACGTCCAAGTGGTACTCCTATGGATTTCCAGCAAGTCTTTAATTGTTATGACAATGAACCTAGCACTGCTACTGTAAAAAACGATTTAAGGGATCGTTTTCAAGTTCGTCGTAAATTTTATTCAACGGTTACGGGCGGACAGTATGCTTGTAAGGAGCAGGCGTTGGTGAAGAGATTTATCCGTCTTAATACTCATGTTGTTTACAACCATCAAGAACAGGCGAAGTACGAGAATCATACGGAGAATGCATTATTGTTGTACATGGCGTGTACTCATGCCTCTAATCCTGTATATGCGACGTTGAAAGTGCGCATCTATTTCTATGATTCACAAATGAATTAA |
Protein Sequence | MAKRPADIVISTPASKVRRRLNFDSPYTGRVAAPTVRVTRRQMWSNRPMYRKPMMYRMYRSPDVPRGCEGPCKVQSCEARHDVSHTGKVICVSDVTRGNGITHRVGKRFCVKSIYVIGKIWMDENIKFKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEPSTATVKNDLRDRFQVRRKFYSTVTGGQYACKEQALVKRFIRLNTHVVYNHQEQAKYENHTENALLLYMACTHASNPVYATLKVRIYFYDSQMN |
NCBI Accession | NP_660166.1 |
---|---|
Location | 1060-1464 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTCACGCACAGGGGAACTACTCACTGCAGCTCAATCAGAGAATGGCGTGTATATCTGGACGGTCAAAAATCCCCTGTATTTCAAGATAACCAAACACCACGAGAGACCATTTCTGAGGAACCACGACATAATCACAATACAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCGTTTACATCCTCAGACCTCGCATTTCTTAAGAGTATTTAAATACCAATTTATTAAATATTTAGATAGGTTGGGAGTGATTAGCATTAACAATTGTATTAGGGCTTTTAGTCATGTATTATATGATGTACTGAATGGAACAATAGATGTAATTGAAAAACATGATATAAAATTCAATATTTATTAA |
Protein Sequence | MDSRTGELLTAAQSENGVYIWTVKNPLYFKITKHHERPFLRNHDIITIQVQFNYNLRKALGIHKCFLTCQIWTRLHPQTSHFLRVFKYQFIKYLDRLGVISINNCIRAFSHVLYDVLNGTIDVIEKHDIKFNIY |
NCBI Accession | NP_660167.1 |
---|---|
Location | 1205-1609 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | ATGCGATCTTCGTCTCCCTCAACGGGCCACTCTACTCAGGTTCCTATCAAGGTGCAACACCGAATCGCCAAGAAGACAACCAGACGACGACGGGTTGATCTACCTTGTGGTTGTTCTTACTTCGTTGCTTTAGGCTGTCACAATCATGGATTCACGCACAGGGGAACTACTCACTGCAGCTCAATCAGAGAATGGCGTGTATATCTGGACGGTCAAAAATCCCCTGTATTTCAAGATAACCAAACACCACGAGAGACCATTTCTGAGGAACCACGACATAATCACAATACAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCGTTTACATCCTCAGACCTCGCATTTCTTAAGAGTATTTAA |
Protein Sequence | MRSSSPSTGHSTQVPIKVQHRIAKKTTRRRRVDLPCGCSYFVALGCHNHGFTHRGTTHCSSIREWRVYLDGQKSPVFQDNQTPRETISEEPRHNHNTSPIQLQPEESVGDTQMFSNLPNLDSFTSSDLAFLKSI |
NCBI Accession | NP_660168.1 |
---|---|
Location | 1512-2597 |
Gene Name | AC1 |
Protein Name | AC1 protein |
Coding Region | ATGGCTCCCCCAAATAAATTCAGAATAAATGCCAAAAATTATTTCCTCACATATCCACACTGCTCTCTCACTAAGGAAGAGGCACTTTCCCAAATTAAAACCCTAGAAACCCCAGTAAATAAACTATTTATCAGAATCTGTAGAGAATTACACGAAGATGGGTCTCCTCACTTGCATGTTCTCATCCAATTCGAAGGAAAGTTCCAGTGTAAGAATCAAAGATTCTTCGATCTCACATCCCCACACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTCAAATCCTACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTTCGGCCCTCAATATACTGAGGGAAAAGGCTCCTAAAGATTTTGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTACTCCTCCAATAGTGGAATATATTTCTCCTTTTTCTTCTTCTTCATTTGACCAAGTTCCCGAAGAACTTGATGAGTGGGCGGTCGATAATGTTGTGAGTGCCGCTGCGCGGCCTTTAAGACCGGTAAGTATAGTGATAGAGGGTGATAGTAGAACGGGGAAGACGATGTGGGCCAGGTCATTAGGACCACATAATTACTTGTGTGGTCATTTGGATCTGAGTCCAAAGGTGTACAGTAATGATGCTTGGTTCAACGTCATTGATGACGTAGATCCGCATTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACCAAGTACGGGAAACCAGTTCAAATTAAAGGCGGGATCCCCACTATCTTCCTCTGCAATCCAGGACCCAATTCCAGCTATAAAGAGTATCTGGAAGAAGAAAAGAACTCAGCACTTCGAAACTGGGCTGTAAAGAATGCGATCTTCGTCTCCCTCAACGGGCCACTCTACTCAGGTTCCTATCAAGGTGCAACACCGAATCGCCAAGAAGACAACCAGACGACGACGGGTTGA |
Protein Sequence | MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIKTLETPVNKLFIRICRELHEDGSPHLHVLIQFEGKFQCKNQRFFDLTSPHRSAHFHPNIQGAKSSTDVKSYMEKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFHNLNSNLDRIFTPPIVEYISPFSSSSFDQVPEELDEWAVDNVVSAAARPLRPVSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAVKNAIFVSLNGPLYSGSYQGATPNRQEDNQTTTG |
NCBI Accession | NP_660169.1 |
---|---|
Location | 2147-2440 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGTCTCCTCACTTGCATGTTCTCATCCAATTCGAAGGAAAGTTCCAGTGTAAGAATCAAAGATTCTTCGATCTCACATCCCCACACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTCAAATCCTACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTTCGGCCCTCAATATACTGA |
Protein Sequence | MGLLTCMFSSNSKESSSVRIKDSSISHPHTGQHISIRTFRELKAQQMSNPTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY |
1 |
First Report of Tomato yellow leaf curl virus Infecting Common Bean in China. Ji YH, et al. Plant Dis. 2012 Aug;96(8):1229. doi: 10.1094/PDIS-03-12-0258-PDN. PMID: 30727082 |
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2 |
Díaz-Pendón JA, et al. Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x. PMID: 20618703 |
3 |
Farooq T, et al. Plant Pathol J. 2019 Oct;35(5):521-529. doi: 10.5423/PPJ.OA.04.2019.0120. Epub 2019 Oct 1. PMID: 31632226 |
4 |
Molecular characterization and pathogenicity of tomato yellow leaf curl virus in China. Zhang H, et al. Virus Genes. 2009 Oct;39(2):249-55. doi: 10.1007/s11262-009-0384-8. PMID: 19590945 |
5 |
First Report of Tomato yellow leaf curl China virus with Betasatellite Infecting Panax notoginseng. Li XJ, et al. Plant Dis. 2014 Sep;98(9):1284. doi: 10.1094/PDIS-03-14-0255-PDN. PMID: 30699620 |
6 |
Wu M, et al. BMC Genomics. 2019 Jul 4;20(1):542. doi: 10.1186/s12864-019-5842-7. PMID: 31272383 |
7 |
A DNAbeta associated with Tomato yellow leaf curl China virus is required for symptom induction. Cui X, et al. J Virol. 2004 Dec;78(24):13966-74. doi: 10.1128/JVI.78.24.13966-13974.2004. PMID: 15564504 |
8 |
Liu Z, et al. Plant Dis. 2008 Jan;92(1):177. doi: 10.1094/PDIS-92-1-0177B. PMID: 30786379 |
9 |
Wang YM, et al. Virology. 2020 Mar;542:54-62. doi: 10.1016/j.virol.2020.01.009. Epub 2020 Jan 21. PMID: 32056668 |
10 |
Li H, et al. Front Plant Sci. 2020 Jun 16;11:840. doi: 10.3389/fpls.2020.00840. eCollection 2020. PMID: 32612626 |