Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_013088455.1 |
Isolate | Venezuela |
Release date | 2021/6/1 |
Submitter | Romay,G., Geraud-Pouey,F., Chirinos,D.T., Mahillon,M., Gillis,A., Mahillon,J., Bragard,C. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_010087241.1 |
---|---|
Location | 85-426 |
Protein Name | hypothetical protein |
Coding Region | ATGAGAGAGCGTCTGTGGAGCCTAGATATTATGACTTGGTCCCTAAGTTGTGGGCCTATAAAAGAAATGACGCTCTCTCTCTGTCACTTTAATTCGAAATGCCTAAGCGGGATGCCCCATGGCGCACTATTGCGGGGACCTCAAAGGTCTCTCGCTCTTCTACTCAGTCGCCTCGTGGTGGTATGGGCCCTAAGGCAACTGCTTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGAACTTGGAGATCACCTGACGTCCCCAAGGGATGTGAAGGCCCATGTAAGGTTCAGTCTTTTGAGCAGCGTCACGATATCTCTCATGTTGGGAAGGTGA |
Protein Sequence | MRERLWSLDIMTWSLSCGPIKEMTLSLCHFNSKCLSGMPHGALLRGPQRSLALLLSRLVVVWALRQLLGLTGPCTGSPGSTELGDHLTSPRDVKAHVRFSLLSSVTISLMLGR |
NCBI Accession | YP_010087242.1 |
---|---|
Location | 183-929 |
Gene Name | V1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGGGATGCCCCATGGCGCACTATTGCGGGGACCTCAAAGGTCTCTCGCTCTTCTACTCAGTCGCCTCGTGGTGGTATGGGCCCTAAGGCAACTGCTTGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGAACTTGGAGATCACCTGACGTCCCCAAGGGATGTGAAGGCCCATGTAAGGTTCAGTCTTTTGAGCAGCGTCACGATATCTCTCATGTTGGGAAGGTGATCTGTATATCCGATGTTACTCGTGGTCCTGGTATCACTCACCGTGTTGGGAAACGTTTCTGCGTGAAGTCAGTCTACATTCTAGGCAAGATATGGATGGACGAGAACATCAAACTTAAGAACCACACTAACAGCGTCATGTTCTGGTTAGTTAGGGACAGGAGACCATATGGCACCCCCATGGATTTTGGCCAAGTTTTCAACATGTACGACAACGAGCCCAGTACTGCCACTGTGAAGAACGATCTCCGTGATCGTTTCCAAGTTATGCACAGGTTCTACGCTAAGGTTACCGGTGGTCAGTATGCTAGCAACGAGCAGGCTCTAGTCAGGCGATTTTGGAAGGTCCACAACCATGTGGTCTACAACCATCAGGAAGCTGGGAAGTACGAGAATCACACTGAGAACGCCCTATTATTGTATATGGCATGCACTCATGCCTCTAACCCTGTATATGCTACGTTGAAAATACGTAGCTATTTTTATGACTCGATCAGCAATTAA |
Protein Sequence | MPKRDAPWRTIAGTSKVSRSSTQSPRGGMGPKATAWVNRPMYRKPRIYRTWRSPDVPKGCEGPCKVQSFEQRHDISHVGKVICISDVTRGPGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRFQVMHRFYAKVTGGQYASNEQALVRRFWKVHNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRSYFYDSISN |
NCBI Accession | YP_010087243.1 |
---|---|
Location | 926-1324 |
Gene Name | C3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACCGGGGAGAACATCACTGTGCGTCAGGCAGAGAGTTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTTTATTTCAAGATTCAACAAGTAGAGGATCCAATTCACACGTCGCTCAGGATTTACCACATCCAGATCCGGTTCAACCACAACCTCAGGAGGGCGTTGAATCTTCACAAAGCTTTCCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGACATATTTAAATAGATTTAGATATTTAGTTTTATTGTATTTAGATAGGATAGGTGTTATCGGAATTAATAATGTAATACGTGCAGTTCGTTTCGCAACGGACAAATCATATGTAAATTATGTACACGAGAATCATGAAATAAAATTCAACTTTTATTAA |
Protein Sequence | MDSRTGENITVRQAESSVFIWEVPNPLYFKIQQVEDPIHTSLRIYHIQIRFNHNLRRALNLHKAFLNFQVWTTSVRASGTTYLNRFRYLVLLYLDRIGVIGINNVIRAVRFATDKSYVNYVHENHEIKFNFY |
NCBI Accession | YP_010087244.1 |
---|---|
Location | 1071-1460 |
Gene Name | C2 |
Protein Name | transcriptional activator protein |
Coding Region | ATGCTAAATTCATCTTCCTCGACGCCCCCCTCTATCAAGGCACAGCACAGAATCGCCAAGAAGAGGGCACTCAGACGGAGACGCATTGACTTGAACTGCGGCTGTTCAATCTTCATGCACATCAACTGCTCTAATAATGGATTCACGCACCGGGGAGAACATCACTGTGCGTCAGGCAGAGAGTTCCGTTTTTATCTGGGAGGTTCCAAATCCCCTTTATTTCAAGATTCAACAAGTAGAGGATCCAATTCACACGTCGCTCAGGATTTACCACATCCAGATCCGGTTCAACCACAACCTCAGGAGGGCGTTGAATCTTCACAAAGCTTTCCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGACATATTTAAATAG |
Protein Sequence | MLNSSSSTPPSIKAQHRIAKKRALRRRRIDLNCGCSIFMHINCSNNGFTHRGEHHCASGREFRFYLGGSKSPLFQDSTSRGSNSHVAQDLPHPDPVQPQPQEGVESSQSFPELPSLDDISSSFWDDIFK |
NCBI Accession | YP_010087245.1 |
---|---|
Location | 1372-2451 |
Gene Name | C1 |
Protein Name | replication-associated protein |
Coding Region | ATGCCACGAAACCCTAATTCATTTCGCTTACAAGCCAGAAATATCTTTTTAACATATCCCCAGTGCGACATATCCAAAGATGAGGCTATTGAGATGCTTCAAGCACTCTCATGGTCAATCGTCAAACCAACCTACATCAGAGTCGCAAGAGAGGAACACTCCGACGGTCTCCCACATCTCCACTGTCTCATCCAGCTCTCCGGCAAGTCAAACATCAAGGATGCTAGGTTTTTCGACCTTACTCACCCCAGAAGGTCTTCCACTTTTCACCCAAATGTCCAGGCAGCCAAAGACGCCAATGCCGTCAAGAACTACATCACCAAGGAGGGTGATTATTGTGAATCCGGACAATACAAAGTGTCTGGCGGAACAAAGTCAAATAAAGACGACGTGTATCACAACGCCGTCCATGCATCTAGTGTGGGAGAAGCTATCGACATTATCCGTGCAGGAGATCCAAAGACGTTCATAGTCAGTTACCATAACATAAAATCGAATTTAGAACGTCTTTTTCAAAAGGCTCCAGAACCATGGGTTCCTCCGTTTCAACTCTCCTCTTTCACTAACGTACCGGAGGAGATGCAAGAGTGGGCTGATGATTACTTTGGGAGGAGTTCCGCTGCGCGGCCGGAGAGACCTATTAGTATCATCGTCGAAGGTGATAGTCGTACAGGGAAGACCATGTGGGCACGTGCATTGGGGTCCCACAATTATTTGAGCGGTCATTTAGATTTCAATGCAAGGGTCTATTCAAATGAAGTGGAGTATAACGTCATTGATGACATAACTCCGCATTATCTAAAGTTAAAGCATTGGAAGGAGTTAATTGGCGCTCAAAAGGACTGGCAGTCAAACTGTAAATACGGAAAGCCAGTTCAAATTAAAGGCGGTATCCCATCAATCGTGCTGTGCAATCCAGGAGAGGGGAGCAGCTATAAAGAATTCCTCGACAAAGAGGAAAATGCAGCTCTGAGGGCGTGGACGCTTAAGAATGCTAAATTCATCTTCCTCGACGCCCCCCTCTATCAAGGCACAGCACAGAATCGCCAAGAAGAGGGCACTCAGACGGAGACGCATTGA |
Protein Sequence | MPRNPNSFRLQARNIFLTYPQCDISKDEAIEMLQALSWSIVKPTYIRVAREEHSDGLPHLHCLIQLSGKSNIKDARFFDLTHPRRSSTFHPNVQAAKDANAVKNYITKEGDYCESGQYKVSGGTKSNKDDVYHNAVHASSVGEAIDIIRAGDPKTFIVSYHNIKSNLERLFQKAPEPWVPPFQLSSFTNVPEEMQEWADDYFGRSSAARPERPISIIVEGDSRTGKTMWARALGSHNYLSGHLDFNARVYSNEVEYNVIDDITPHYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKEFLDKEENAALRAWTLKNAKFIFLDAPLYQGTAQNRQEEGTQTETH |
NCBI Accession | YP_010087246.1 |
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Location | 1980-2372 |
Gene Name | C4 |
Protein Name | C4 protein |
Coding Region | ATGAGGCTATTGAGATGCTTCAAGCACTCTCATGGTCAATCGTCAAACCAACCTACATCAGAGTCGCAAGAGAGGAACACTCCGACGGTCTCCCACATCTCCACTGTCTCATCCAGCTCTCCGGCAAGTCAAACATCAAGGATGCTAGGTTTTTCGACCTTACTCACCCCAGAAGGTCTTCCACTTTTCACCCAAATGTCCAGGCAGCCAAAGACGCCAATGCCGTCAAGAACTACATCACCAAGGAGGGTGATTATTGTGAATCCGGACAATACAAAGTGTCTGGCGGAACAAAGTCAAATAAAGACGACGTGTATCACAACGCCGTCCATGCATCTAGTGTGGGAGAAGCTATCGACATTATCCGTGCAGGAGATCCAAAGACGTTCATAG |
Protein Sequence | MRLLRCFKHSHGQSSNQPTSESQERNTPTVSHISTVSSSSPASQTSRMLGFSTLLTPEGLPLFTQMSRQPKTPMPSRTTSPRRVIIVNPDNTKCLAEQSQIKTTCITTPSMHLVWEKLSTLSVQEIQRRS |
1 |
Romay G, et al. Viruses. 2019 Apr 4;11(4):327. doi: 10.3390/v11040327. PMID: 30987360 |
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2 |
First Report of Tomato Yellow Leaf Curl Virus Infecting Pepper and Tomato in Oklahoma. Paslay C, et al. Plant Dis. 2022 Aug 12. doi: 10.1094/PDIS-04-22-0927-PDN. Online ahead of print. PMID: 35961018 |
3 |
An anomalous detection of Tomato yellow leaf curl virus in tomato in New York State. Perry KL. Plant Dis. 2021 Apr 28. doi: 10.1094/PDIS-02-21-0356-PDN. Online ahead of print. PMID: 33908793 |
4 |
Spinach latent virus Infecting Tomato in Virginia, United States. Vargas-Asencio J, et al. Plant Dis. 2013 Dec;97(12):1663. doi: 10.1094/PDIS-05-13-0529-PDN. PMID: 30716862 |
5 |
Venkataravanappa V, et al. Acta Virol. 2015 Jun;59(2):125-39. doi: 10.4149/av_2015_02_125. PMID: 26104329 |
6 |
Pest categorisation of non-EU viruses and viroids of Prunus L. EFSA Panel on Plant Health (PLH), et al. EFSA J. 2019 Sep 30;17(9):e05735. doi: 10.2903/j.efsa.2019.5735. eCollection 2019 Sep. PMID: 32626421 |
7 |
Venkataravanappa V, et al. Virusdisease. 2022 Jun;33(2):194-207. doi: 10.1007/s13337-022-00772-0. Epub 2022 Jul 1. PMID: 35991698 |
8 |
Leaf Curl Disease of Carica papaya from India May Be Caused by a Bipartite Geminivirus. Saxena S, et al. Plant Dis. 1998 Jan;82(1):126. doi: 10.1094/PDIS.1998.82.1.126A. PMID: 30857046 |
9 |
Mackie AE, et al. Plant Dis. 2019 Dec;103(12):3009-3017. doi: 10.1094/PDIS-02-19-0312-RE. Epub 2019 Sep 25. PMID: 31567060 |
10 |
First Report of a Phytoplasma Affecting Tomato in Poland. Pospieszny H, et al. Plant Dis. 2007 Aug;91(8):1054. doi: 10.1094/PDIS-91-8-1054B. PMID: 30780451 |