Genus | Begomovirus |
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NCBI Assembly | GCF_000838745.1 |
Release date | 2015/2/12 |
Submitter | Ramos,P.L., Guerra,O., Peral,P., Oramas,P., Guevara,R.G., Rivera-Bustamante,R., Guevara-Gonzalez,R., Peral,R. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_044922.1 |
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Location | 189-944 |
Gene Name | CP |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGCGATCGTACATGGCGTTCTATCGCGGGAACCTCAAAGGTTAGCCGCAATGCTAACTACTCGCCTCGTACAGGAAGTGGGCCGATAGGTAACAAGGCATCCGAATGGGTTAATAGGCCCATGTACAGGAAGCCCAAGATCTACCGGATGATGAGGACCCCCGATGTGCCCAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCCTACGAACAGCGCCATGATATTTCACATGTCGGGAAGGTCATGTGTGTCTCTGACGTGACACGTGGTAATGGCATTACCCATCGTGTGGGCAAGCGCTTCTGTGTTAAGTCTGTGTATATTCTAGGCAAGATATGGATGGATGAGAACATCAAACTGAAGAACCACACGAACAGCGTCATGTTTTGGCTAGTACGAGACCGGAGACCTTATGGAACTCCCATGGATTTCGGACAGGTGTTCAACATGTACGACAACGAGCCCAGTACTGCCACTGTGAAGAACGACCTCCGGGATCGTTACCAAGTTATGCACAGGTTCCATACTAAGGTGACTGGTGGTCAGTATGCGAGCAACGAGCAGGCTCTGGTTCGACGGTTCTGGAAAGTGAACAACCACGTGGTGTACAATCACCAGGAAGCCGCGAAGTACGAGAATCATACGGAGAACGCCCTATTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTATATGCAACGCTTAAGATCCGGATCTATTTTTATGATTCGATCTTGAATTAA |
Protein Sequence | MPKRDRTWRSIAGTSKVSRNANYSPRTGSGPIGNKASEWVNRPMYRKPKIYRMMRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRYQVMHRFHTKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSILN |
NCBI Accession | NP_044923.1 |
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Location | 941-1339 |
Protein Name | AL3 protein |
Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCGGAGAATGGCGTGTATATCTGGGAAATACAAAATCCCCTTTATTTCAAGATGTACAGAGTAGAGGACTTGCTGTTCACCAGAACCAGGGTATACCACGCACAAATACGATTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGACGACAGCTTCTGGATCAACATATTTAGCTAGGTTTAGATTTTTAGTTAATATGTATTTAGATCAGATAGGCGTCATTTCAATTAACAATGTAATTAGAGCTGTTCGATTCGCAACAAACAGAGCATATGTAAATTATGTACTGGAGAATCATTCAATAAAATTCAAATTTTATTAA |
Protein Sequence | MDSRTGELITAHQAENGVYIWEIQNPLYFKMYRVEDLLFTRTRVYHAQIRFNHNLRRALHLHKAYLNFQVWTTSTTASGSTYLARFRFLVNMYLDQIGVISINNVIRAVRFATNRAYVNYVLENHSIKFKFY |
NCBI Accession | NP_044924.1 |
---|---|
Location | 1086-1475 |
Protein Name | transactivator protein |
Coding Region | ATGCGATGTTCATCACCCTCACAACCCCCCTCTATCAAGATAGCACACAGGCAAGGCAAGAAGAGGGCAATCAGGAGACGGCGTGTTGATCTGCAGTGCGGGTGCTCCATATACTTCCACTTAAACTGTGCGGGACATGGATTCACGCACAGGGGAACTCATCACTGCACATCAGGCGGAGAATGGCGTGTATATCTGGGAAATACAAAATCCCCTTTATTTCAAGATGTACAGAGTAGAGGACTTGCTGTTCACCAGAACCAGGGTATACCACGCACAAATACGATTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCCTACCTGAACTTCCAAGTCTGGACGACATCGACGACAGCTTCTGGATCAACATATTTAGCTAG |
Protein Sequence | MRCSSPSQPPSIKIAHRQGKKRAIRRRRVDLQCGCSIYFHLNCAGHGFTHRGTHHCTSGGEWRVYLGNTKSPLFQDVQSRGLAVHQNQGIPRTNTIQPQPEESVASPQSLPELPSLDDIDDSFWINIFS |
NCBI Accession | NP_044925.1 |
---|---|
Location | 1387-2472 |
Protein Name | replication associated protein |
Coding Region | ATGCCACGGAAGGGTTCTTTCTCAGTTAAAGCCAAAAATTATTTCCTCACGTATCCACAGTGTTCCCTTAGTAAAGAAGAAGCACTTTCCCAAATACAAAACCTAAACACACCAGTAGACAAGAAATTCATCAAGATCTGCAGAGAGTTGCATGAAAATGGGGAACCTCATCTCCACGTGCTTGTCCAATTCGAAGGCAAATACAACTGCACGAATAACAGATTCTTCGATGTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAAACATACATTACCAAGGACGGAGACACACTGGAATGGGGAGAATTCCAGATCGACGGTAGGTCTGCTAGGGGAGGTCAACAATCAGCTAACGATTCATATGCAAAGGCGTTAAATGCAGGAAATGTTCAGTCTGCCATGGCAGTTTTAAAAGAAGAACAGCCAAAAGATTTTGTCCTGCATAATCATAACATCCGCTCAAATCTAGAAAGAATATTCGCCAAGGCTCCGGAACCATGGGTTCCTCCGTTTCCCCTCTCGTCTTTCACTAACGTTCCCGATGAGATGCAAGAGTGGGCGGATGTTTATTTTGGAGCTGGTTCCGCTGCGCGGCCAAATAGACCCATGAGTATTGTCATAGAAGGTGATTCAAGGACAGGGAAGACGATGTGGGCGCGTGCGTTAGGCCCACATAATTATCTGAGTGGACATTTGGACTTCAATACCAGGGTCTATTCAAACGACGTGCAGTATAACGTCATTGATGACATCGCACCGCATTATCTAAAGCTAAAGCACTGGAAAGAATTGCTGGGGGCCCAGAGAGATTGGCAATCAAACTGCAAGTACGGTAAGCCAGTTCAAATTAAAGGCGGAATCCCAGCAATCGTGCTTTGCAATCCTGGTGAGGGTGCCAGCTATAAAGACTTCCTCAGCAAAGACGAGAACACATCTCTCAGAGACTGGACTATCAAGAATGCGATGTTCATCACCCTCACAACCCCCCTCTATCAAGATAGCACACAGGCAAGGCAAGAAGAGGGCAATCAGGAGACGGCGTGTTGA |
Protein Sequence | MPRKGSFSVKAKNYFLTYPQCSLSKEEALSQIQNLNTPVDKKFIKICRELHENGEPHLHVLVQFEGKYNCTNNRFFDVVSPTRSAHFHPNIQGAKSSSDVKTYITKDGDTLEWGEFQIDGRSARGGQQSANDSYAKALNAGNVQSAMAVLKEEQPKDFVLHNHNIRSNLERIFAKAPEPWVPPFPLSSFTNVPDEMQEWADVYFGAGSAARPNRPMSIVIEGDSRTGKTMWARALGPHNYLSGHLDFNTRVYSNDVQYNVIDDIAPHYLKLKHWKELLGAQRDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKDFLSKDENTSLRDWTIKNAMFITLTTPLYQDSTQARQEEGNQETAC |
NCBI Accession | NP_047198.1 |
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Location | 381-1157 |
Gene Name | BR1 |
Protein Name | nuclear shuttle |
Coding Region | ATGATAATGTATCAGTCAAAAGGTAAACGTGGTTTTCATATGACTAACCGACGATATAACTCTCGTTATTCTATGTTTAACCGTATGACCGCTATTAAACGACATGATGGAAAACGTCGAGGAGGAATGTTATCAAAGCCCACTGATGAGCCCAAGATGACAGCCCAACGTATACATGAGAATCAGTATGGGCCAGATTTTGTCCTGGCCCATAATTCAGCTATCTCAACGTTTATCAGCTACCCTTGCTTGGGCAAAATCGAACCGAACCGGAGCAGGTCCTATATCAAACTGAAACGCCTACGTTTCAAAGGGACTGTGAAGATTGAACGTGTCCAAATGGACATGAACATGGACGGATCTGCCCCTAAGGTTGAAGGAGTGTTCTCACTCGTCGTGGTTATGGATCGTAAACCACATCTTAGCGGGTCTGGTTGTCTGCATACATTTGACGAACTATTTGGTGCAAGGATCCATAGCCATGGTACTCTTAACATAGTACCTTCTTTGAAAGACCGGTTTTATATAAGACACGTGTTCAAACGTGTATTATCTGTTGAAAAGGATACGCTTATGGTGGACGTGGAAGGTACTACTGCTCTTTCAACCAGGCGTTTCAATTGCTGGGCTACGTTCAAGGATCTTGATCGTGATTCATGCAAAGGTGTATATGACAACGTCAGCAAGAACGCCATTTTAGTTTATTATTGTTGGATGTCAGATACTGTATCTAAGGCATCCTCTTTTGTATCGTTTGACCTTGATTACGTCGGATGA |
Protein Sequence | MIMYQSKGKRGFHMTNRRYNSRYSMFNRMTAIKRHDGKRRGGMLSKPTDEPKMTAQRIHENQYGPDFVLAHNSAISTFISYPCLGKIEPNRSRSYIKLKRLRFKGTVKIERVQMDMNMDGSAPKVEGVFSLVVVMDRKPHLSGSGCLHTFDELFGARIHSHGTLNIVPSLKDRFYIRHVFKRVLSVEKDTLMVDVEGTTALSTRRFNCWATFKDLDRDSCKGVYDNVSKNAILVYYCWMSDTVSKASSFVSFDLDYVG |
NCBI Accession | NP_047199.1 |
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Location | 1223-2104 |
Protein Name | cell-to-cell movement protein |
Coding Region | ATGGATTCTCAGTTAGTTAATCCTCCAAGCGCATTTAATTACATAGAGTCGCATCGCGACGAATATCAGCTTTCTCATGACCTAACTGAGATAATACTGCAATTTCCGTCCACGGCGTCTCAGTTGACAGCTAGACTCAGTCGTAGCTGCATGAAGATTGACCACTGCGTCATAGAGTACAGACAGCAGGTACCAATAAACGCCACCGGGTCGGTAATAGTGGAGATTCACGATAAAAGGATGACGGAGAATGAGTCATTACAGGCGTCATGGACATTTCCGATCAGGTGCAACATAGATCTCCACTATTTTTCAGCTTCATTCTTCTCCGTGAAAGACCCAATTCCATGGAAGTTGTACTACAGGGTTTGCGATACGAATGTTCATCAGCGGACCCACTTCGCTAAGTTCAAGGGGAAGCTGAAATTGTCCACAGCCAAACACTCAGTAGACATCCCCTTCCGGGCACCAACAGTAAAGATCCTGTCCAAACAGTTCACGGACAAAGATGTGGACTTTTCCCATGTGGACTACGGAAAATGGGAGAGGAAGCCCATTAGATGCGCGTCCATGTCCAGAATTGGGCTTCGAGGCCCAATTGAAATCAGGCCTGGTGAGTCGTGGGCTTCAAGAAGTACAGTAGGCCCAGGTCTATCAGATGCGGACTCGGAGGTGGAAAACGAACTCCACCCATACAAACACCTAAACAGACTAGGAACAGCTGTTATGGACCCAGGAGAGTCTGCTTCTATTGTGGGAGCCCAGAGAGCTGAATCGAGCATTACCATGTCAATGGGGCAGTTAAATGAATTAGTTAGGACGACAGTCCAGGAATGTATTAATAGTAATTGTAAGGCTTCTCAGCCCAAATCATTAAAATAA |
Protein Sequence | MDSQLVNPPSAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTARLSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTENESLQASWTFPIRCNIDLHYFSASFFSVKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDVDFSHVDYGKWERKPIRCASMSRIGLRGPIEIRPGESWASRSTVGPGLSDADSEVENELHPYKHLNRLGTAVMDPGESASIVGAQRAESSITMSMGQLNELVRTTVQECINSNCKASQPKSLK |
1 |
Taino Tomato Mottle Virus, a New Bipartite Geminivirus from Cuba. Ramos PL, et al. Plant Dis. 1997 Sep;81(9):1095. doi: 10.1094/PDIS.1997.81.9.1095C. PMID: 30861977 |
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2 |
Ramos PL, et al. Arch Virol. 2003 Sep;148(9):1697-712. doi: 10.1007/s00705-003-0136-3. PMID: 14505083 |
3 |
Ramos PL, et al. Virus Res. 2004 Jun 15;102(2):125-32. doi: 10.1016/j.virusres.2004.01.027. PMID: 15084394 |
4 |
First Report of Tomato Mottle Geminivirus Infecting Tomatoes in Yucatan, Mexico. Garrido-Ramirez ER, et al. Plant Dis. 1998 May;82(5):592. doi: 10.1094/PDIS.1998.82.5.592B. PMID: 30857003 |
5 |
Macroptilium yellow mosaic virus, a New Begomovirus Infecting Macroptilium lathyroides in Cuba. Ramos PL, et al. Plant Dis. 2002 Sep;86(9):1049. doi: 10.1094/PDIS.2002.86.9.1049B. PMID: 30818538 |
6 |
Domínguez M, et al. Plant Dis. 2002 Sep;86(9):1050. doi: 10.1094/PDIS.2002.86.9.1050A. PMID: 30818540 |
7 |
Fuentes A, et al. Biotechnol Appl Biochem. 2004 Jun;39(Pt 3):355-61. doi: 10.1042/BA20030192. PMID: 15154849 |
8 |
Mauricio-Castillo JA, et al. Arch Virol. 2014 Sep;159(9):2283-94. doi: 10.1007/s00705-014-2073-8. Epub 2014 Apr 16. PMID: 24737005 |
9 |
Complementation of coat protein mutants of pepper huasteco geminivirus in transgenic tobacco plants. Guevara-González RG, et al. Phytopathology. 1999 Jul;89(7):540-5. doi: 10.1094/PHYTO.1999.89.7.540. PMID: 18944688 |