Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000874565.1 |
Isolate | Brazil |
Release date | 2015/2/13 |
Submitter | Castillo-Urquiza,G.P., Beserra,J.E. Jr., Bruckner,F.P., Lima,A.T., Varsani,A., Alfenas-Zerbini,P., Murilo Zerbini,F., Beserra,J.E.A. Jr., Lima,A.T.M., Zerbini,P.A., Zerbini,F.M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_001960945.1 |
---|---|
Location | 302-1051 |
Gene Name | CP |
Protein Name | coat protein |
Coding Region | ATGCCGAAGCGGGACGCCCCATGGCGCCTGATGGCGGGAACCTCAAAGGTTAGCCGATCTGTCAACTACTCCCCTCGTGGAGGCCCAAAGTTCAACAAGGCATCTGAGTGGGTCAACAGGCCCATGTATAGAAAGCCCAGGATATATCGGACGCTAAGGTCTCCTGACGTCCCCAAAGGCTGTGAAGGGCCTTGTAAGGTCCAGTCGTTCGAGGCGCGACATGATGTCTCTCATGTCGGGAAGGTCATATGCGTCTCTGACGTGACACGTGGTAATGGTATTACCCATCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTATATATTTTAGGGAAGATCTGGATGGACGAAGCGATCAAGCTCAAGAACCACACGAACAGCGTCATGTTCTGGTTAGTTAGAGACAGGAGACCCTACGGAACTCCTATGGATTTTGGACAGGTGTTCAACCTGTTCGACAACGAGCCCAGCACTGCCACGGTTAAGAGCGATCTCCGTGATCGCTTCCAAGTGATGCGCAAGTTTTACGCCAAGGTCACAGGTGGACAGTATGCTAGCAACGAGCAGGCTCTGGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAACCACCAAGAAGCTGCGAAGTACGAGAACCACACAGAGAACGCTATGTTATTGTATATGGCATGTACCCATGCCTCTAACCCTGTGTATGCGAGTCTCAAGATTCGAATCTACTTCTACGATTCCGTTCTCAATTAA |
Protein Sequence | MPKRDAPWRLMAGTSKVSRSVNYSPRGGPKFNKASEWVNRPMYRKPRIYRTLRSPDVPKGCEGPCKVQSFEARHDVSHVGKVICVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDEAIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKSDLRDRFQVMRKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAAKYENHTENAMLLYMACTHASNPVYASLKIRIYFYDSVLN |
NCBI Accession | YP_001960946.1 |
---|---|
Location | 1048-1446 |
Gene Name | Ren |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACCGGGGAGAGCATCACTGCACCTCAGGCAGAGAATGGCGTATATATCTGGGAGATATCAAATCCCCTCTATTTCAAGATATACAACGTAGAGGATCTACGGTACACGGCGACCAGAGTGTACCACATCCAGATACGGTTCAACCACAACCTCAGGAGGATGCTGGGTCTACACAAGGCCTTCCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGACATATTTACATAGGTTTAGGCAGTTAGTTATGTTGTATCTCGATCAATTAGGTGTGATCTCCCTTAATAATGTAATTAGGGCTGTTAGGTTTGCAACAGACAAACCATATGTAAACTATGTACTGGAAAATCATTCAATAAAATTTAAATTTTATTAA |
Protein Sequence | MDSRTGESITAPQAENGVYIWEISNPLYFKIYNVEDLRYTATRVYHIQIRFNHNLRRMLGLHKAFLNFQVWTTSVRASGTTYLHRFRQLVMLYLDQLGVISLNNVIRAVRFATDKPYVNYVLENHSIKFKFY |
NCBI Accession | YP_001960947.1 |
---|---|
Location | 1193-1582 |
Gene Name | Trap |
Protein Name | trans-activating protein |
Coding Region | ATGCTAAATTCATCTTCCTCGACGCCCCCCTCTATCAAGCCCAAGCACAGGATTGCGAAGAAGAGGGCTACCAGACGACGCAGAATTGACCTAGACTGCGGGTGCTCGGTCTTCGTGCACCTTAACTGCGCAGGGCATGGATTCACGCACCGGGGAGAGCATCACTGCACCTCAGGCAGAGAATGGCGTATATATCTGGGAGATATCAAATCCCCTCTATTTCAAGATATACAACGTAGAGGATCTACGGTACACGGCGACCAGAGTGTACCACATCCAGATACGGTTCAACCACAACCTCAGGAGGATGCTGGGTCTACACAAGGCCTTCCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGACATATTTACATAG |
Protein Sequence | MLNSSSSTPPSIKPKHRIAKKRATRRRRIDLDCGCSVFVHLNCAGHGFTHRGEHHCTSGREWRIYLGDIKSPLFQDIQRRGSTVHGDQSVPHPDTVQPQPQEDAGSTQGLPELPSLDDISSSFWDDIFT |
NCBI Accession | YP_001960948.1 |
---|---|
Location | 1494-2579 |
Gene Name | Rep |
Protein Name | replication-associated protein |
Coding Region | ATGCCACCGCCCAAACGTTTTAGAATAAATGCCAAGAACTATTTCTTGACATACCCCAAATGCAGCCTAACCAAAGAAGAGGCACTTTCCCAATTATTAGCCCTAGAAATTCCTGCACAGAAGAAATTTATCAAGGTAGCTAGAGAGCTCCACGACGATGGGGAGCCTCATCTCCACGTCCTCATCCAGTTCGAAGGGAAATTCCAGTGCACGAATAATAGATTCTTCGACCTTGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACGTTCAGGGGGCTAAGTCGTCGTCCGACGTCAAGTCCTATGTCGACAAGGACGGAGATACAGTCGAATGGGGAGTTTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTTGCCAGACAGCTAACGACGCTGCCGCAGAGGCCTTAAACGCGCCGTCGAAAGAAGCGGCGCTGAGCATAATCAGAGAGAAGTTGCCGGAAAAGTATCTCTTCCAATTCCATAATCTAAATAGTAATTTAGATCGCATTTTCGCAAAGGCTCCGGAAACTTGGTCTCCTCCGTTTCCACTCTCCTCATTCACTCACGTTCCCGACGAGATGCAAGAGTGGGCCGATGACTATTTTGGAAGAGATGCCGCTGCGCGGCCCAGCAGGCCTGTTAGTTTGATAGTCGAAGGAGATAGTCGAACAGGCAAGACAATGTGGGCTCGTGCTTTAGGGGCCCATAACTATCTCAGTGGACACCTGGACTTCAACTCCAGGGTCTATTCAAATGAGGCTGAATATAACGTCATTGATGACGTCCCTCCGCACTACCTAAAGCTAAAGCACTGGAAAGAATTGATGGGAGCTCAAAAGGACTGGCAGTCAAATTGCAAATACGGAAAGCCTGTTCAAATTAAAGGCGGTATCCCATCAATCGTGCTCTGCAATCCTGGAGAGGGGGCCAGCTATAAAGATTTCCTCGAGAAAGAGGAAAACCTTGCTCTGAAGAACTGGACGATCAAGAATGCTAAATTCATCTTCCTCGACGCCCCCCTCTATCAAGCCCAAGCACAGGATTGCGAAGAAGAGGGCTACCAGACGACGCAGAATTGA |
Protein Sequence | MPPPKRFRINAKNYFLTYPKCSLTKEEALSQLLALEIPAQKKFIKVARELHDDGEPHLHVLIQFEGKFQCTNNRFFDLVSPTRSAHFHPNVQGAKSSSDVKSYVDKDGDTVEWGVFQVDGRSARGGCQTANDAAAEALNAPSKEAALSIIREKLPEKYLFQFHNLNSNLDRIFAKAPETWSPPFPLSSFTHVPDEMQEWADDYFGRDAAARPSRPVSLIVEGDSRTGKTMWARALGAHNYLSGHLDFNSRVYSNEAEYNVIDDVPPHYLKLKHWKELMGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLEKEENLALKNWTIKNAKFIFLDAPLYQAQAQDCEEEGYQTTQN |
NCBI Accession | YP_001960949.1 |
---|---|
Location | 2165-2422 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGGGGAGCCTCATCTCCACGTCCTCATCCAGTTCGAAGGGAAATTCCAGTGCACGAATAATAGATTCTTCGACCTTGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACGTTCAGGGGGCTAAGTCGTCGTCCGACGTCAAGTCCTATGTCGACAAGGACGGAGATACAGTCGAATGGGGAGTTTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTTGCCAGACAGCTAACGACGCTGCCGCAGAGGCCTTAA |
Protein Sequence | MGSLISTSSSSSKGNSSARIIDSSTLSPQPGQHISIRTFRGLSRRPTSSPMSTRTEIQSNGEFSRSTEEVLEEVARQLTTLPQRP |
NCBI Accession | YP_001960950.1 |
---|---|
Location | 518-1285 |
Gene Name | NSP |
Protein Name | nuclear shuttle protein |
Coding Region | ATGTATCCTGTTAAGTATAGACGTGGCTGGTCGACTACTCAACGACGAAGTTATCGACGGGCTCCTGTGTTCAAGCGGAATGCCGTTAAACGTGCAGATTGGATACGTCGACCGAGTAATTCAATGAAGGCCCATGACGAGCCCAAGATGACAGCCCAGCGGATACATGAGAACCAGTTTGGCCCAGAATTCATGATGGTTCAGAATACAGCAATTTCTACTTACATATCCTTTCCCAATCTTGGTAAGACAGAACCGAACCGGTCTAGGTCATATATTAAGCTAAAACGACTTCGTTTTAAAGGGACTGTCAAGATAGAACGTGTTCAGCCAGATGTCAACATGGACGGTTCGGTCTCGAAAACCGAAGGTGTGTTCTCTCTCGTAGTGGTTGTGGATCGTAAGCCTCATTTGGGCCCTTCTGGATGTTTGCACACCTTTGACGAGCTCTTCGGTGCAAGGATCCACAGCCATGGGAACCTATCTATTACTCCTTCATTGAAGGACCGGTACTACATACGTCATGTGACCAAACATGTACTCTCGGCGGAAAAGGACACCATGATGGTCAACCTCGAAGGGACGACATTCCTATCTAACAGGCGTGTTAGCTGTTGGGCCGGTTTTAAGGATCATGATCATGATTCATGTAATGGGGTTTATGCTAACATAAGCAAGAACGCCCTGTTAGTTTATTACTGTTGGATGTCGGATATTATGTCCAAGGCATCGACATTTGTATCATATGATCTGGATTATGTTGGTTGA |
Protein Sequence | MYPVKYRRGWSTTQRRSYRRAPVFKRNAVKRADWIRRPSNSMKAHDEPKMTAQRIHENQFGPEFMMVQNTAISTYISFPNLGKTEPNRSRSYIKLKRLRFKGTVKIERVQPDVNMDGSVSKTEGVFSLVVVVDRKPHLGPSGCLHTFDELFGARIHSHGNLSITPSLKDRYYIRHVTKHVLSAEKDTMMVNLEGTTFLSNRRVSCWAGFKDHDHDSCNGVYANISKNALLVYYCWMSDIMSKASTFVSYDLDYVG |
NCBI Accession | YP_001960951.1 |
---|---|
Location | 1346-2227 |
Gene Name | MP |
Protein Name | movement protein |
Coding Region | ATGGAATCTCAGTTAGCTAATCCTCCGAACGCCTTCAATTATATAGAGTCGCAAAGGGACGAGTACCAGCTGTCTCATGACCTAACTGAGATCGTACTGCAGTTTCCGTCCACCGCCTCCCAGATAAGTGCCAGACTCAGTCGTAGATGTATGAAAATAGACCACTGCGTCATAGAGTACAGGCAGCAGGTTCCGATTAACGCCACTGGGGCGGTGGTAGTGGAGATTCACGACAAGAGGATGACGGACAATGAGTCGTTACAGGCGTCGTGGACTTTCCCGATCAGGTGTAACATCGATCTCCACTACTTTTCATCTTCCTTCTTCTCCCTCAAAGACCCAATTCCATGGAAGCTGTACTACAGAGTTTGCGACACGAACGTCCATCAGAGGACCCACTTCGCAAAATTCAAAGGTAAACTGAAGCTGTCGACGGCTAAACACTCCGTGGATATTCCTTTCAGGGCTCCGACGGTCAAGATCCTGTCCAAACAGTTTACCGACAAGGATGTCGATTTCTGCCACGTGGGATACGGAAGATGGGAGAGGAAACCAGTCCGATCCGCATCCGCCTCAACAATTGGGCTTCGCAGCCCAATACAACTTAGGCCAGGAGAGTCGTGGGCTGTCAGGAGCACTGTAGGTGCCAATCCATCGGATGCGGAGTCCGATATAGTAGAGACATCGCATCCATACAGGGAGCTGAACAGACTGGGTACAACAATGTTGGACCCAGGCGAATCGGCTTCCATCGTGGGGGCCCAGAGAGCCCAGTCCAACATTACGATGTCTCTGGGACAATTAAACGAACTGCTGAGGAACACGGTCCAGGAGTGCATTAACAGTAACTGTGTGCCTTCGCAGGCCAAGTCTTTAAATTAA |
Protein Sequence | MESQLANPPNAFNYIESQRDEYQLSHDLTEIVLQFPSTASQISARLSRRCMKIDHCVIEYRQQVPINATGAVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDVDFCHVGYGRWERKPVRSASASTIGLRSPIQLRPGESWAVRSTVGANPSDAESDIVETSHPYRELNRLGTTMLDPGESASIVGAQRAQSNITMSLGQLNELLRNTVQECINSNCVPSQAKSLN |
1 |
Zhang S, et al. Mol Plant Pathol. 2022 Sep;23(9):1262-1277. doi: 10.1111/mpp.13229. Epub 2022 May 22. PMID: 35598295 |
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2 |
First Report of Olive Mild Mosaic Virus in Imported Tulips (Tulipa gesneriana) in Korea. Bak S, et al. Plant Dis. 2023 May 16. doi: 10.1094/PDIS-03-23-0527-PDN. Online ahead of print. PMID: 37194209 |
3 |
Tomato Brown Rugose Fruit Virus Contributes to Enhanced Pepino Mosaic Virus Titers in Tomato Plants. Klap C, et al. Viruses. 2020 Aug 11;12(8):879. doi: 10.3390/v12080879. PMID: 32796777 |
4 |
European Food Safety Authority (EFSA), et al. EFSA J. 2021 Jan 12;19(1):e06388. doi: 10.2903/j.efsa.2021.6388. eCollection 2021 Jan. PMID: 33473252 |
5 |
Zhao W, et al. J Virol Methods. 2021 Dec;298:114277. doi: 10.1016/j.jviromet.2021.114277. Epub 2021 Sep 4. PMID: 34492235 |
6 |
First Report of Tobacco mild green mosaic virus Infecting Capsicum annuum in Tunisia. Font MI, et al. Plant Dis. 2009 Jul;93(7):761. doi: 10.1094/PDIS-93-7-0761B. PMID: 30764375 |
7 |
Elbeshehy EKF, et al. Molecules. 2022 Dec 24;28(1):139. doi: 10.3390/molecules28010139. PMID: 36615333 |
8 |
First Report of Wild tomato mosaic virus Infecting Tobacco (Nicotiana tabacum) in China. Du ZG, et al. Plant Dis. 2014 Jun;98(6):856. doi: 10.1094/PDIS-09-13-0927-PDN. PMID: 30708656 |
9 |
European Food Safety Authority (EFSA). EFSA J. 2017 Jan 23;15(1):e04650. doi: 10.2903/j.efsa.2017.4650. eCollection 2017 Jan. PMID: 32625249 |
10 |
Single mutation converts mild pathotype of the Pepino mosaic virus into necrotic one. Hasiów-Jaroszewska B, et al. Virus Res. 2011 Jul;159(1):57-61. doi: 10.1016/j.virusres.2011.04.008. Epub 2011 Apr 22. PMID: 21536084 |