| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000874565.1 |
| Isolate | Brazil |
| Release date | 2015/2/13 |
| Submitter | Castillo-Urquiza,G.P., Beserra,J.E. Jr., Bruckner,F.P., Lima,A.T., Varsani,A., Alfenas-Zerbini,P., Murilo Zerbini,F., Beserra,J.E.A. Jr., Lima,A.T.M., Zerbini,P.A., Zerbini,F.M. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
| NCBI Accession | YP_001960945.1 |
|---|---|
| Location | 302-1051 |
| Gene Name | CP |
| Protein Name | coat protein |
| Coding Region | ATGCCGAAGCGGGACGCCCCATGGCGCCTGATGGCGGGAACCTCAAAGGTTAGCCGATCTGTCAACTACTCCCCTCGTGGAGGCCCAAAGTTCAACAAGGCATCTGAGTGGGTCAACAGGCCCATGTATAGAAAGCCCAGGATATATCGGACGCTAAGGTCTCCTGACGTCCCCAAAGGCTGTGAAGGGCCTTGTAAGGTCCAGTCGTTCGAGGCGCGACATGATGTCTCTCATGTCGGGAAGGTCATATGCGTCTCTGACGTGACACGTGGTAATGGTATTACCCATCGTGTGGGTAAGCGTTTCTGTGTTAAGTCTGTATATATTTTAGGGAAGATCTGGATGGACGAAGCGATCAAGCTCAAGAACCACACGAACAGCGTCATGTTCTGGTTAGTTAGAGACAGGAGACCCTACGGAACTCCTATGGATTTTGGACAGGTGTTCAACCTGTTCGACAACGAGCCCAGCACTGCCACGGTTAAGAGCGATCTCCGTGATCGCTTCCAAGTGATGCGCAAGTTTTACGCCAAGGTCACAGGTGGACAGTATGCTAGCAACGAGCAGGCTCTGGTCAAGCGTTTCTGGAAGGTCAACAATCATGTGGTCTACAACCACCAAGAAGCTGCGAAGTACGAGAACCACACAGAGAACGCTATGTTATTGTATATGGCATGTACCCATGCCTCTAACCCTGTGTATGCGAGTCTCAAGATTCGAATCTACTTCTACGATTCCGTTCTCAATTAA |
| Protein Sequence | MPKRDAPWRLMAGTSKVSRSVNYSPRGGPKFNKASEWVNRPMYRKPRIYRTLRSPDVPKGCEGPCKVQSFEARHDVSHVGKVICVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDEAIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKSDLRDRFQVMRKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAAKYENHTENAMLLYMACTHASNPVYASLKIRIYFYDSVLN |
| NCBI Accession | YP_001960946.1 |
|---|---|
| Location | 1048-1446 |
| Gene Name | Ren |
| Protein Name | replication enhancer protein |
| Coding Region | ATGGATTCACGCACCGGGGAGAGCATCACTGCACCTCAGGCAGAGAATGGCGTATATATCTGGGAGATATCAAATCCCCTCTATTTCAAGATATACAACGTAGAGGATCTACGGTACACGGCGACCAGAGTGTACCACATCCAGATACGGTTCAACCACAACCTCAGGAGGATGCTGGGTCTACACAAGGCCTTCCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGACATATTTACATAGGTTTAGGCAGTTAGTTATGTTGTATCTCGATCAATTAGGTGTGATCTCCCTTAATAATGTAATTAGGGCTGTTAGGTTTGCAACAGACAAACCATATGTAAACTATGTACTGGAAAATCATTCAATAAAATTTAAATTTTATTAA |
| Protein Sequence | MDSRTGESITAPQAENGVYIWEISNPLYFKIYNVEDLRYTATRVYHIQIRFNHNLRRMLGLHKAFLNFQVWTTSVRASGTTYLHRFRQLVMLYLDQLGVISLNNVIRAVRFATDKPYVNYVLENHSIKFKFY |
| NCBI Accession | YP_001960947.1 |
|---|---|
| Location | 1193-1582 |
| Gene Name | Trap |
| Protein Name | trans-activating protein |
| Coding Region | ATGCTAAATTCATCTTCCTCGACGCCCCCCTCTATCAAGCCCAAGCACAGGATTGCGAAGAAGAGGGCTACCAGACGACGCAGAATTGACCTAGACTGCGGGTGCTCGGTCTTCGTGCACCTTAACTGCGCAGGGCATGGATTCACGCACCGGGGAGAGCATCACTGCACCTCAGGCAGAGAATGGCGTATATATCTGGGAGATATCAAATCCCCTCTATTTCAAGATATACAACGTAGAGGATCTACGGTACACGGCGACCAGAGTGTACCACATCCAGATACGGTTCAACCACAACCTCAGGAGGATGCTGGGTCTACACAAGGCCTTCCTGAACTTCCAAGTCTGGACGACATCAGTTCGAGCTTCTGGGACGACATATTTACATAG |
| Protein Sequence | MLNSSSSTPPSIKPKHRIAKKRATRRRRIDLDCGCSVFVHLNCAGHGFTHRGEHHCTSGREWRIYLGDIKSPLFQDIQRRGSTVHGDQSVPHPDTVQPQPQEDAGSTQGLPELPSLDDISSSFWDDIFT |
| NCBI Accession | YP_001960948.1 |
|---|---|
| Location | 1494-2579 |
| Gene Name | Rep |
| Protein Name | replication-associated protein |
| Coding Region | ATGCCACCGCCCAAACGTTTTAGAATAAATGCCAAGAACTATTTCTTGACATACCCCAAATGCAGCCTAACCAAAGAAGAGGCACTTTCCCAATTATTAGCCCTAGAAATTCCTGCACAGAAGAAATTTATCAAGGTAGCTAGAGAGCTCCACGACGATGGGGAGCCTCATCTCCACGTCCTCATCCAGTTCGAAGGGAAATTCCAGTGCACGAATAATAGATTCTTCGACCTTGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACGTTCAGGGGGCTAAGTCGTCGTCCGACGTCAAGTCCTATGTCGACAAGGACGGAGATACAGTCGAATGGGGAGTTTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTTGCCAGACAGCTAACGACGCTGCCGCAGAGGCCTTAAACGCGCCGTCGAAAGAAGCGGCGCTGAGCATAATCAGAGAGAAGTTGCCGGAAAAGTATCTCTTCCAATTCCATAATCTAAATAGTAATTTAGATCGCATTTTCGCAAAGGCTCCGGAAACTTGGTCTCCTCCGTTTCCACTCTCCTCATTCACTCACGTTCCCGACGAGATGCAAGAGTGGGCCGATGACTATTTTGGAAGAGATGCCGCTGCGCGGCCCAGCAGGCCTGTTAGTTTGATAGTCGAAGGAGATAGTCGAACAGGCAAGACAATGTGGGCTCGTGCTTTAGGGGCCCATAACTATCTCAGTGGACACCTGGACTTCAACTCCAGGGTCTATTCAAATGAGGCTGAATATAACGTCATTGATGACGTCCCTCCGCACTACCTAAAGCTAAAGCACTGGAAAGAATTGATGGGAGCTCAAAAGGACTGGCAGTCAAATTGCAAATACGGAAAGCCTGTTCAAATTAAAGGCGGTATCCCATCAATCGTGCTCTGCAATCCTGGAGAGGGGGCCAGCTATAAAGATTTCCTCGAGAAAGAGGAAAACCTTGCTCTGAAGAACTGGACGATCAAGAATGCTAAATTCATCTTCCTCGACGCCCCCCTCTATCAAGCCCAAGCACAGGATTGCGAAGAAGAGGGCTACCAGACGACGCAGAATTGA |
| Protein Sequence | MPPPKRFRINAKNYFLTYPKCSLTKEEALSQLLALEIPAQKKFIKVARELHDDGEPHLHVLIQFEGKFQCTNNRFFDLVSPTRSAHFHPNVQGAKSSSDVKSYVDKDGDTVEWGVFQVDGRSARGGCQTANDAAAEALNAPSKEAALSIIREKLPEKYLFQFHNLNSNLDRIFAKAPETWSPPFPLSSFTHVPDEMQEWADDYFGRDAAARPSRPVSLIVEGDSRTGKTMWARALGAHNYLSGHLDFNSRVYSNEAEYNVIDDVPPHYLKLKHWKELMGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLEKEENLALKNWTIKNAKFIFLDAPLYQAQAQDCEEEGYQTTQN |
| NCBI Accession | YP_001960949.1 |
|---|---|
| Location | 2165-2422 |
| Gene Name | AC4 |
| Protein Name | AC4 |
| Coding Region | ATGGGGAGCCTCATCTCCACGTCCTCATCCAGTTCGAAGGGAAATTCCAGTGCACGAATAATAGATTCTTCGACCTTGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACGTTCAGGGGGCTAAGTCGTCGTCCGACGTCAAGTCCTATGTCGACAAGGACGGAGATACAGTCGAATGGGGAGTTTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGTTGCCAGACAGCTAACGACGCTGCCGCAGAGGCCTTAA |
| Protein Sequence | MGSLISTSSSSSKGNSSARIIDSSTLSPQPGQHISIRTFRGLSRRPTSSPMSTRTEIQSNGEFSRSTEEVLEEVARQLTTLPQRP |
| NCBI Accession | YP_001960950.1 |
|---|---|
| Location | 518-1285 |
| Gene Name | NSP |
| Protein Name | nuclear shuttle protein |
| Coding Region | ATGTATCCTGTTAAGTATAGACGTGGCTGGTCGACTACTCAACGACGAAGTTATCGACGGGCTCCTGTGTTCAAGCGGAATGCCGTTAAACGTGCAGATTGGATACGTCGACCGAGTAATTCAATGAAGGCCCATGACGAGCCCAAGATGACAGCCCAGCGGATACATGAGAACCAGTTTGGCCCAGAATTCATGATGGTTCAGAATACAGCAATTTCTACTTACATATCCTTTCCCAATCTTGGTAAGACAGAACCGAACCGGTCTAGGTCATATATTAAGCTAAAACGACTTCGTTTTAAAGGGACTGTCAAGATAGAACGTGTTCAGCCAGATGTCAACATGGACGGTTCGGTCTCGAAAACCGAAGGTGTGTTCTCTCTCGTAGTGGTTGTGGATCGTAAGCCTCATTTGGGCCCTTCTGGATGTTTGCACACCTTTGACGAGCTCTTCGGTGCAAGGATCCACAGCCATGGGAACCTATCTATTACTCCTTCATTGAAGGACCGGTACTACATACGTCATGTGACCAAACATGTACTCTCGGCGGAAAAGGACACCATGATGGTCAACCTCGAAGGGACGACATTCCTATCTAACAGGCGTGTTAGCTGTTGGGCCGGTTTTAAGGATCATGATCATGATTCATGTAATGGGGTTTATGCTAACATAAGCAAGAACGCCCTGTTAGTTTATTACTGTTGGATGTCGGATATTATGTCCAAGGCATCGACATTTGTATCATATGATCTGGATTATGTTGGTTGA |
| Protein Sequence | MYPVKYRRGWSTTQRRSYRRAPVFKRNAVKRADWIRRPSNSMKAHDEPKMTAQRIHENQFGPEFMMVQNTAISTYISFPNLGKTEPNRSRSYIKLKRLRFKGTVKIERVQPDVNMDGSVSKTEGVFSLVVVVDRKPHLGPSGCLHTFDELFGARIHSHGNLSITPSLKDRYYIRHVTKHVLSAEKDTMMVNLEGTTFLSNRRVSCWAGFKDHDHDSCNGVYANISKNALLVYYCWMSDIMSKASTFVSYDLDYVG |
| NCBI Accession | YP_001960951.1 |
|---|---|
| Location | 1346-2227 |
| Gene Name | MP |
| Protein Name | movement protein |
| Coding Region | ATGGAATCTCAGTTAGCTAATCCTCCGAACGCCTTCAATTATATAGAGTCGCAAAGGGACGAGTACCAGCTGTCTCATGACCTAACTGAGATCGTACTGCAGTTTCCGTCCACCGCCTCCCAGATAAGTGCCAGACTCAGTCGTAGATGTATGAAAATAGACCACTGCGTCATAGAGTACAGGCAGCAGGTTCCGATTAACGCCACTGGGGCGGTGGTAGTGGAGATTCACGACAAGAGGATGACGGACAATGAGTCGTTACAGGCGTCGTGGACTTTCCCGATCAGGTGTAACATCGATCTCCACTACTTTTCATCTTCCTTCTTCTCCCTCAAAGACCCAATTCCATGGAAGCTGTACTACAGAGTTTGCGACACGAACGTCCATCAGAGGACCCACTTCGCAAAATTCAAAGGTAAACTGAAGCTGTCGACGGCTAAACACTCCGTGGATATTCCTTTCAGGGCTCCGACGGTCAAGATCCTGTCCAAACAGTTTACCGACAAGGATGTCGATTTCTGCCACGTGGGATACGGAAGATGGGAGAGGAAACCAGTCCGATCCGCATCCGCCTCAACAATTGGGCTTCGCAGCCCAATACAACTTAGGCCAGGAGAGTCGTGGGCTGTCAGGAGCACTGTAGGTGCCAATCCATCGGATGCGGAGTCCGATATAGTAGAGACATCGCATCCATACAGGGAGCTGAACAGACTGGGTACAACAATGTTGGACCCAGGCGAATCGGCTTCCATCGTGGGGGCCCAGAGAGCCCAGTCCAACATTACGATGTCTCTGGGACAATTAAACGAACTGCTGAGGAACACGGTCCAGGAGTGCATTAACAGTAACTGTGTGCCTTCGCAGGCCAAGTCTTTAAATTAA |
| Protein Sequence | MESQLANPPNAFNYIESQRDEYQLSHDLTEIVLQFPSTASQISARLSRRCMKIDHCVIEYRQQVPINATGAVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYFSSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDVDFCHVGYGRWERKPVRSASASTIGLRSPIQLRPGESWAVRSTVGANPSDAESDIVETSHPYRELNRLGTTMLDPGESASIVGAQRAQSNITMSLGQLNELLRNTVQECINSNCVPSQAKSLN |
| 1 |
Zhang S, et al. Mol Plant Pathol. 2022 Sep;23(9):1262-1277. doi: 10.1111/mpp.13229. Epub 2022 May 22. PMID: 35598295 |
|---|---|
| 2 |
Engineered Resistance to Tobamoviruses. Carr JP. Viruses. 2024 Jun 22;16(7):1007. doi: 10.3390/v16071007. PMID: 39066170 |
| 3 |
Tomato Brown Rugose Fruit Virus Contributes to Enhanced Pepino Mosaic Virus Titers in Tomato Plants. Klap C, et al. Viruses. 2020 Aug 11;12(8):879. doi: 10.3390/v12080879. PMID: 32796777 |
| 4 |
First Report of Tobacco mild green mosaic virus Infecting Capsicum annuum in Tunisia. Font MI, et al. Plant Dis. 2009 Jul;93(7):761. doi: 10.1094/PDIS-93-7-0761B. PMID: 30764375 |
| 5 |
Sabanadzovic S, et al. Plant Dis. 2009 Dec;93(12):1354. doi: 10.1094/PDIS-93-12-1354A. PMID: 30759518 |
| 6 |
Zhao W, et al. J Virol Methods. 2021 Dec;298:114277. doi: 10.1016/j.jviromet.2021.114277. Epub 2021 Sep 4. PMID: 34492235 |
| 7 |
A New Technique to Select Mild Strains of Cucumber mosaic virus. Kobori T, et al. Plant Dis. 2005 Aug;89(8):879-882. doi: 10.1094/PD-89-0879. PMID: 30786521 |
| 8 |
European Food Safety Authority (EFSA), et al. EFSA J. 2021 Jan 12;19(1):e06388. doi: 10.2903/j.efsa.2021.6388. eCollection 2021 Jan. PMID: 33473252 |
| 9 |
Cillo F, et al. Mol Plant Microbe Interact. 2009 Oct;22(10):1239-49. doi: 10.1094/MPMI-22-10-1239. PMID: 19737097 |
| 10 |
Elbeshehy EKF, et al. Molecules. 2022 Dec 24;28(1):139. doi: 10.3390/molecules28010139. PMID: 36615333 |