Tomato leaf curl Vietnam virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_000842785.1 |
| Isolate | Viet Nam: Co Nhue-Tu Liem-Hanol |
| Release date | 2015/2/12 |
| Submitter | Tsai,W.S., Hong,L.T.A., Green,S.K. |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_004153
Gene Information
| NCBI Accession | NP_690097.1 |
|---|---|
| Location | 131-481 |
| Gene Name | V2 |
| Protein Name | pre-coat protein |
| Coding Region | ATGTGGGATCCGCTTTTAAACGAGTTCCCCGAAACCGTTCACGGTTTTAGGTGTATGCTAGCGATTAAATATTTGCAATTAGTAGAAAATACATACTCTCCCGATACATTAGGGTACGATTTAATACGTGATTTAATTTTAGTCATTCGTGCCAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTTCGTCGCCGGCTGAACTTCGACAGCCCGTATACCAACCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGCAAGCCCAAGATGTACAGAATGTACAAAAGCCCTGA |
| Protein Sequence | MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHSRIQGSSPAELRQPVYQPCCCPHCPRHKQKEVMGESAHVPQAQDVQNVQKP |
| NCBI Accession | NP_690098.1 |
|---|---|
| Location | 291-1064 |
| Gene Name | V1 |
| Protein Name | coat protein |
| Coding Region | ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTTCGTCGCCGGCTGAACTTCGACAGCCCGTATACCAACCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGCAAGCCCAAGATGTACAGAATGTACAAAAGCCCTGATGTTCCACGAGGATGTGAAGGCCCATGTAAAGTCCAGTCTTATGAACAGCGTCATGATGTAGCCCATGTAGGGAAGGTAATTTGTGTGTCTGATGTTACACGTGGTAACGGGTTGACTCATCGTGTTGGGAAGAGGTTCTGTATTAAGTCAGTTTATGTTTTGGGTAAGATCTGGATGGATGAGAACATTAAGACGAAGAATCATACCAATACTGTCATGTTCTTTTTAGTACGTGATAGAAGACCTTTTGGAACTCCCCAAGATTTTGGTCAGGTGTTTAACATGTATGATAACGAGCCAAGTACAGCCACGGTGAAGAACGATAACAGAGATCGTTTTCAAGTTCTTCGTCGATTTCAGGCAACTGTTACTGGTGGTCAGTATGCAAGCAAGGAGCAAGCAATAGTTAGGAAGTTTATGAAGGTGAACAACCATGTGACGTATAATCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTCTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTAAAAATCAGGATCTATTTCTATGATTCTGTTCAGAATTAA |
| Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYTNRAVAPTVLVTNKRRSWVNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
| NCBI Accession | NP_690099.1 |
|---|---|
| Location | 1061-1465 |
| Gene Name | C3 |
| Protein Name | C3 |
| Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCAACTCAGGCAGAGAATGGCGTTTTTACTTGGGAGATAACAAATCCCCTGTATTTCAAGATAACGGAACTACAAAACAGGCCCTTCCTATCGGACAACGACATAGTGACGGTCAGGATCCAATTCAACTACAACCCGAGGAAAGCACTGGGGATGCACCAATGTTTTCTGGACTTCCGGATATGGACGAACTCACACCTTCAGACTGGTCGTTTCTTAAGAGTATTTAGGACACAAGTTTTGAAATTTCTCAATAATTTGGGTGTAATTAGTTTGAATAATGTAATTAGAGCAGTAAATTATGTATTATGGGACGCATTAACGCAAACAACATTTGTAAACAGTTCTCATGTAATAAAATTTAATCTTTATTAA |
| Protein Sequence | MDSRTGELITATQAENGVFTWEITNPLYFKITELQNRPFLSDNDIVTVRIQFNYNPRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNNVIRAVNYVLWDALTQTTFVNSSHVIKFNLY |
| NCBI Accession | NP_690100.1 |
|---|---|
| Location | 1206-1613 |
| Gene Name | C2 |
| Protein Name | C2 |
| Coding Region | ATGCAGTCTTCGTCAGCATCACCGAGCCACTGTACTCAAGTACCTATCAAAGTCCAGCACAGGATAGCGAAGAAGAAAATAACCAGGAGACGGAGGATTGACCTTCCCTGTGGTTGTTCTTATTTCAGCGCACTTAACTGCGCCAACCATGGATTCACGCACAGGGGAACTCATCACTGCAACTCAGGCAGAGAATGGCGTTTTTACTTGGGAGATAACAAATCCCCTGTATTTCAAGATAACGGAACTACAAAACAGGCCCTTCCTATCGGACAACGACATAGTGACGGTCAGGATCCAATTCAACTACAACCCGAGGAAAGCACTGGGGATGCACCAATGTTTTCTGGACTTCCGGATATGGACGAACTCACACCTTCAGACTGGTCGTTTCTTAAGAGTATTTAG |
| Protein Sequence | MQSSSASPSHCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSALNCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQALPIGQRHSDGQDPIQLQPEESTGDAPMFSGLPDMDELTPSDWSFLKSI |
| NCBI Accession | NP_690101.1 |
|---|---|
| Location | 1513-2601 |
| Gene Name | C1 |
| Protein Name | Rep protein |
| Coding Region | ATGGCTCCTCCTAATAAATTCAGAATAAATGCCAAAAATTATTTCCTCACATATCCACACTGCTCTCTCACTAAAGAAGAAGCACTTTCCCAACTTAAAAACCTAGAAACCCCAGTAAATAAACTATTTATCCGCATCTGCAGAGAATTCCACGAAGATGGAACTCCTCACCTGCATGTTCTCATCCAATTCGAAGGGAAATTCCAATGTAAAAACCAAAGATTCTTCGATCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGCAGCTAAAAGCTCAACAGATGTCAAAGCCTATATGGACAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGTTGCCAGTCTGCAAACGACGCATATGCCGAGGCAATCAATTCGGGGTCCAAAGCATCGGCCCTCAATATATTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAATTCCATAATTTAAATAGTAATTTAGATAGAATTTTTACTCCTCCAATGGAGGTTTACGTTTCGCCTTTTTCTTCTTCTTCGTTTGATCGAGTCCCAGAGGAACTCGAAGAGTGGGCTGCAGAGAACGTCGTCAGTTCCGCTGCGCGGCCATTACGACCAATAAGTATAGTCATAGAGGGTGATAGCAGGACGGGGAAGACGATGTGGGCTCGATCATTGGGTCCACACAATTATCTGTGTGGTCATCTTGATTTGAGCCCAAAGGTGTACAGTAATGATGCTTGGTTCAACGTCATCGATGACGTTGATCCGCACTACCTAAAGCATTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGAAAACCAGTTCAAATTAAAGGTGGCATTCCAGCTATCTTCCTGTGCAATCCAGGGCCCAACTCAAGCTATAAAGAATACCTAGACGAAGAAAAGAATACTGCATTAAAGTCGTGGGCAATAAAGAATGCAGTCTTCGTCAGCATCACCGAGCCACTGTACTCAAGTACCTATCAAAGTCCAGCACAGGATAGCGAAGAAGAAAATAACCAGGAGACGGAGGATTGA |
| Protein Sequence | MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLKNLETPVNKLFIRICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKAYMDKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFHNLNSNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAVFVSITEPLYSSTYQSPAQDSEEENNQETED |
| NCBI Accession | NP_690102.1 |
|---|---|
| Location | 2151-2444 |
| Gene Name | C4 |
| Protein Name | C4 |
| Coding Region | ATGGAACTCCTCACCTGCATGTTCTCATCCAATTCGAAGGGAAATTCCAATGTAAAAACCAAAGATTCTTCGATCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGCAGCTAAAAGCTCAACAGATGTCAAAGCCTATATGGACAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAGATCGATGGAAGATCGGCTAGAGGAGGTTGCCAGTCTGCAAACGACGCATATGCCGAGGCAATCAATTCGGGGTCCAAAGCATCGGCCCTCAATATATTAA |
| Protein Sequence | MELLTCMFSSNSKGNSNVKTKDSSISHPQAGQHISIRTFRQLKAQQMSKPIWTKTETCLIMEFSRSMEDRLEEVASLQTTHMPRQSIRGPKHRPSIY |
References More References in PubMed
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First Report of Tomato yellow leaf curl Kanchanaburi virus Infecting Eggplant in Laos. Tang YF, et al. Plant Dis. 2014 Mar;98(3):428. doi: 10.1094/PDIS-07-13-0696-PDN. PMID: 30708424 |
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Leclair P, et al. Arch Virol. 2025 Jul 5;170(8):173. doi: 10.1007/s00705-025-06345-y. PMID: 40616602 |
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Tobacco leaf curl Puer virus: a novel monopartite begomovirus infecting Nicotiana tabacum in China. Jiang N, et al. Arch Virol. 2022 Jan;167(1):229-232. doi: 10.1007/s00705-021-05267-9. Epub 2021 Oct 15. PMID: 34652555 |
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The Insidious Threat: Assessing the Dangers and Spread of Tomato Leaf Curl New Delhi Virus. Vo TTB, et al. Plant Pathol J. 2025 Feb;41(1):1-16. doi: 10.5423/PPJ.RW.11.2024.0177. Epub 2025 Feb 1. PMID: 39916412 |
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Vo TTB, et al. Viruses. 2025 Feb 20;17(3):294. doi: 10.3390/v17030294. PMID: 40143225 |
| 10 |
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