Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000840145.1 |
Release date | 2015/2/12 |
Submitter | Chiang,B.T., Green,S.K., Tsai,W.S., Nakhla,M.K., Maxwell,D.P. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_632014.1 |
---|---|
Location | 131-472 |
Gene Name | V2 |
Protein Name | precoat protein |
Coding Region | ATGTGGGATCCACTTTTAAATGATTTTCCGGAGTCTGTGCATGGTCTACGGTGTATGCTTGCCATTAAGTATCTACATTTTGTAGAAAATACATATTCCCCGGATACTTTGGGTTACGATCTCATACGTGATTTGATTTTAGTTATCCGTGCTAGAGATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCTTCCAAGGTTCGTCGCCGTCTGAACTTCGCCAGCCCATATGGCAACCGTGTAGCTGCCCCCACTGTCCTCGTCACAAACAAAAAGAGTTCATGGGTGAATCGGCCCTTGTTCAGAAAGCCCAAGATGTACAGGATGTATAA |
Protein Sequence | MWDPLLNDFPESVHGLRCMLAIKYLHFVENTYSPDTLGYDLIRDLILVIRARDYVEATRRYSHFHSRFQGSSPSELRQPIWQPCSCPHCPRHKQKEFMGESALVQKAQDVQDV |
NCBI Accession | NP_632015.1 |
---|---|
Location | 291-1064 |
Gene Name | V1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCTTCCAAGGTTCGTCGCCGTCTGAACTTCGCCAGCCCATATGGCAACCGTGTAGCTGCCCCCACTGTCCTCGTCACAAACAAAAAGAGTTCATGGGTGAATCGGCCCTTGTTCAGAAAGCCCAAGATGTACAGGATGTATAAAAGCCCAGATGTTCCTCGTGGTTGTGAAGGCCCATGTAAGGTACAGTCATTTGAACAGCGTCATGATATAGCCCATGTGGGCAAGGTAATATGTGTGTCCGATGTCACACGAGGTAATGGGCTGACCCATCGTGTTGGGAAGAGGTTTTGTGTTAAGTCCATTTATGTGTTGGGTAAGATATGGATGGATGAGAATATCAAGACGAAGAATCACACAAATACTGTGATGTTCTTCTTAGTCCGTGATAGAAGGCCTTTTGGTACTCCACAAGATTTCGGTCAGGTCTTTAATATGTATGATAATGAGCCTAGCACTGCAACGGTGAAGAATGACAATAGAGATAGGTTTCAAGTTCTCCGTCGATTCCAGGCTACGGTGACTGGCGGTCAGTATGCGTGCAAAGAACAAGCTCTAGTTAGGAAGTTTATGAAAATCAACAACCATGTTACTTATAATCACCAAGAGGCTGCTAAATATGATAACCATACAGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCAGTAATCCTGTGTATGCTACTTTGAAAATCAGAATTTATTTCTATGATTCTGTTCAAAATTAA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSWVNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDIAHVGKVICVSDVTRGNGLTHRVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
NCBI Accession | NP_632016.1 |
---|---|
Location | 1061-1465 |
Gene Name | C3 |
Protein Name | putative replication enhancer |
Coding Region | ATGGATTCTCGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTATACCTGGACAGTCAACAATCCCCTCTATTTCAAAATAACACAACACAACCAGAGACCATTTCTACAGAACCACGACGTCATGACAATACAAATTCAATTCAACTACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTAATTTGCCAGATTTGGACTCGTTTACAACCTCAGACCTCGCATTTCTTGAGGGTATTTAAATATCAATGTATGAAGTATTTAGACAATTTAGGAGTTATTAGTTTAAACAATGTAATTAGAGCAATGACAAATGTACTATACAATGTAATAGAGGGCACAGTCGATGCTCAGTTTTCACATATAATAACATTTAAAATTTATTAA |
Protein Sequence | MDSRTGELITAAQAENGVYTWTVNNPLYFKITQHNQRPFLQNHDVMTIQIQFNYNLRKALGIHQCFLICQIWTRLQPQTSHFLRVFKYQCMKYLDNLGVISLNNVIRAMTNVLYNVIEGTVDAQFSHIITFKIY |
NCBI Accession | NP_632017.1 |
---|---|
Location | 1206-1613 |
Gene Name | C2 |
Protein Name | Trap protein |
Coding Region | ATGCGGAATTCATCACCCTCACCGAGCCACTCTACTCACGTGCCAATCAAGGTCCAACACAAAATAGCGAAGAAGAGACCAATTCGCAGGCGGAGGGTTGATCTTCCTTGTGGGTGCTCTTATTATCTTGGAATTAACTGCGCATCACATGGATTCTCGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTATACCTGGACAGTCAACAATCCCCTCTATTTCAAAATAACACAACACAACCAGAGACCATTTCTACAGAACCACGACGTCATGACAATACAAATTCAATTCAACTACAACCTGAGGAAAGCGTTGGGAATACACCAGTGTTTTCTAATTTGCCAGATTTGGACTCGTTTACAACCTCAGACCTCGCATTTCTTGAGGGTATTTAA |
Protein Sequence | MRNSSPSPSHSTHVPIKVQHKIAKKRPIRRRRVDLPCGCSYYLGINCASHGFSHRGTHHCSSSREWRVYLDSQQSPLFQNNTTQPETISTEPRRHDNTNSIQLQPEESVGNTPVFSNLPDLDSFTTSDLAFLEGI |
NCBI Accession | NP_632018.1 |
---|---|
Location | 1513-2601 |
Gene Name | C1 |
Protein Name | Rep protein |
Coding Region | ATGCATCCACTTAATAAATTCAGGATAAATGCGAAGAACTACTTCCTCACATATCCACACTGCTCCCTAACCAAAGAAGAGGCACTTTCCCAAATACAAGCTCTACAAACCCCAACAAATAAGCTATTCATTAGGGTTTGCAGAGAGCTTCACGAAGATGGGGCTCCTCACCTGCACATTCTCATCCAATTCGAAGGAAAATTCCAATGTAAAAATAACAGATTCTTCGACCTCACATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCAACAGATGTCAAAACCTATATGGAGAAAGACGGAGACGTGCTTGATCATGGAATTTTCCAGGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTGAGGCCCTCAATATATTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTACACCTCCATTAGAGGTTTATATTTCTCCTTTTAATTCTTCTTCATTTGATCAAGTTCCAGTAGAACTTGTAGAATGGGTTGCCGAGAACGTGAGGGATTCCGCTGCGCGGCCATGGAGACCCATGAGTATTGTGGTAGAGGGAGAGAGTCGTACAGGGAAGACACTTTGGGCCAGGTCTCTAGGCCCACACAATTACTTGTGTGGTCATCTTGACCTAAGCCCAAGAGTCTACAACAATGAGGCATGGTACAACGTCATTGATGACGTCGATCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCGACACCAAATACGGGAAACCAATTCAAATTAAAGGTGGTATCCCAACAATCTTCCTTTGCAATCCAGGGCCAACATCATCATATAAAGAGTACTTAGACGAAGAAAAGAATTTCGCACTCAAAGACTGGGCTTTAAAGAATGCGGAATTCATCACCCTCACCGAGCCACTCTACTCACGTGCCAATCAAGGTCCAACACAAAATAGCGAAGAAGAGACCAATTCGCAGGCGGAGGGTTGA |
Protein Sequence | MHPLNKFRINAKNYFLTYPHCSLTKEEALSQIQALQTPTNKLFIRVCRELHEDGAPHLHILIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYMEKDGDVLDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFHNLNSNLDRIFTPPLEVYISPFNSSSFDQVPVELVEWVAENVRDSAARPWRPMSIVVEGESRTGKTLWARSLGPHNYLCGHLDLSPRVYNNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSDTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPLYSRANQGPTQNSEEETNSQAEG |
NCBI Accession | NP_632019.1 |
---|---|
Location | 2151-2444 |
Gene Name | C4 |
Protein Name | C4 protein |
Coding Region | ATGGGGCTCCTCACCTGCACATTCTCATCCAATTCGAAGGAAAATTCCAATGTAAAAATAACAGATTCTTCGACCTCACATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCAACAGATGTCAAAACCTATATGGAGAAAGACGGAGACGTGCTTGATCATGGAATTTTCCAGGTCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTGAGGCCCTCAATATATTAA |
Protein Sequence | MGLLTCTFSSNSKENSNVKITDSSTSHPQPGQHISIRTFRELRAQQMSKPIWRKTETCLIMEFSRSMEDQLEEVANLPTTHMPRQSIQGPKLRPSIY |
1 |
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2 |
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3 |
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7 |
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8 |
First Report of Tomato yellow leaf curl Thailand virus in Taiwan. Jan FJ, et al. Plant Dis. 2007 Oct;91(10):1363. doi: 10.1094/PDIS-91-10-1363A. PMID: 30780543 |
9 |
Muniyappa V, et al. Arch Virol. 2000;145(8):1583-98. doi: 10.1007/s007050070078. PMID: 11003471 |
10 |
Tsai WA, et al. Front Plant Sci. 2019 Jul 12;10:906. doi: 10.3389/fpls.2019.00906. eCollection 2019. PMID: 31354773 |