Tomato leaf curl Sulawesi virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000886855.1 |
| Isolate |
Indonesia:Tompaso, North Sulawesi |
| Release date |
2015/2/22 |
| Submitter |
Tsai,W.S., Shih,S.L., Green,S.K., Lee,L.M., Luther,G.C., Ratulangi,M., Sembel,D.T., Jan,F.-J. |
| Host |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGAGGGCCGCGAAATTTTTTTCCGTACTGTGGTCCACGTTGACTGGCCAATCACATTTGAGCTTCAAAGCTTAGATAGTGCGTACCGCACTATAAAACTTGGGGGCCACGAAATAATGGCAAACATGTGGGATCCTCTAATTCATCCCTTTCCTGACACTCTGCACGGATTTCGATGTATGCTGGCAATAAAGTACTTACAATCCTTCGAGTGTAAGTATTCTCCGGATACTGTTGGGCGTGAATTTATCAGGGATCTTATTTGCATTTTGAGGTGCAAAAACTATGCCGAAGCGTTCCATAGATACAGTGTCGTCACTGCCAATGTCTATAACACGCCGGAGGCTAAATTACGGGAGTCAGTTCAGTCTCCCTGCAGCTGTCCCCACTGCCCCAGGCATGTCATACAAAAGACGTGCTTGGACAGGTCGTCCAATGTATCGGAAACCCAGATTTTACCGTGCCAGAAGGAGCAGTGATGTTCCTCGTGGCTGTGAAGGACCTTGTAAGGTCCAGTCGTATGAACAGAGACATGATATCTCTCATGTCGGTAAGGTATTGTGTGTCAGTGATGTAACTAGGGGAGGTGGTATAACTCATAGGGTAGGTAAACGTTTTTGTGTTAAGTCTGTTTACATACTAGGTAAAGTGTGGATGGATGAGAATATCAAAACCAAAAACCATACGAACAACTGTACGTTCTGGTTAGTTAGGGATAGGAGGCCTTATGGCACTCCGCAAGACTTTGGTCAGGTTTTTAATATGTATGATAACGAACCAAGTACCGCTACCGTGAAGAATGACCTGCGTGATCGATTCCAAGTGCTTCATCGATTTTCAGCTATGGTTACCGGTGGTCAATATGCTAGCAAGGAGCAAGCAATCGTGAAGAAGTTCTACAAGGTGAACAACTACGTCGTCTATAATCATCAGGAAGCTGCTAAATATGAAAATCACACGGAGAATGCTTTGTTATTGTACATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACATTGAAGATACGCATATATTTCTATGACAATGTAACAAATTAATATAAATTGAATTTTATTATATGAAGCATGTCTACATACATGGTCTCCTCTATTACATTCCATAAGACATGATTAACTGCTCTAATAACATTATTTACTGATACAACACCCAAACTATTCAGAAATTTACATACATGATATTTAAATACTCTTAAAAAATGCCAAGTCAGAGGTCGTAAACGAGTCCAAATGCGGAAGATTAAAAAACATCTGTGAATCCCCAGAGCTCTCCTGAGGTTGTGATTGAACTGGATCTGCATTTCTATGTAGTCCCAGTTGTTGTTGAACGATCTGGTTTTGTGCTTCAGCACCTTGAAATAGAGGGGATTTGGGACCATCCAAGTATAAACGCCACTCTGCGCCTGAGTTGCAGTGATGTACTCCCCTGTGCGAAAATCCACAACCATGACAGTTAAGGCTGAGATAGTATGAGCATCCACAATCTAAATCAATGCGTCTTCGCCTTGTGATTTTCTTTTTTGCAATTTTATGTTGAATTTTCTGTGGTACTTGTATATAATGGCTCGTTGAGGTAGATGAAGGTTGCATTTTTTGTAGCCCAGTCTTTTAGTGCTTTATTTTTTTCTTCTTCCAGATATTCTTTATATGAAGAAGATGGGCCTGGATTGCAGAGGAAGATAGTGGGAATGCCACCTTTAATTTGAATTGGCTTTCCGTACTTTGTGTTGCTTTGCCAATCCCTCTGGGCCCCCATGAACTCTTTAAAGTGTTTTAGGTAATGCGGGTCGACGTCATCAATGACGTTATACCAAGCATCATTGCAATACACCTTTGGACTAAGATCAAGATGGCCGCACAAGTAATTATGCCTACCAAGAGATCTTGCCCACATGGTTTTACCAGTTCTAGAAGCACCTTCAATCACAATACTTATGGGCCTCCATGGCCGCGCAGCGGCGTCAACAACATTTTCTTTTGCCCACTGTTCCAATATATGAGGAACATTATCAAATGAATCTCGACTAAATGGAGTGACATAAATTTGTTGTTGTGGTTTAAAGAGTTTATCTAGATTTGCATTTAAATTATGAAATTGAAATAGAAAGTCTCTGGGAAGTTTCTCTCTAATGATGTTCAAAGCTTCCCCTTTGGAAGCAGCATTTAAAGCAGCTGCCACAACATCGTTTGCTGCCTGTTGACCTCCTCTAGCAGATCTTCCATCGATCTGAAAACAACCCCAGTCGAGGTAATCGCCGTCCTTCTGAATGTACGACTTGATATCGGACGAAGATCTTGCTCCCTGAAAATTGGGGTGGAATGATCTGCTAGAATTAGGATGGGATATGTCGAAATGTCTTGCATTTCTAAACTTGGCTTTACCTTTGAATTGGACCAAAGCATGGATGTGCAGAGACCCATCTTGGTGTTTTTCCTGTGAAACCCTAACGAAGAGTTTCTCGGAAGGGCATGAAATGCCTAGGGTCTTCTCCAGAACAGTTTCTTTAGACAGACTACACTGGGGATATGTGAGAAATATATTCTTAGCATTAACACAGAAAGAAGGATGACGTGGCATGGCTATTGGAGACTTCACTAACTCTATACACTGGGGGACAATGGAGACTCATATATACTAGAGTCCCTTAATGGCATAATGGTAATTAGACAGAGTTACTTTAATTTGAAATTTAAATTTTTTTTCCCAAAAGCGGCCCTCGTATAATATT
Gene Information
|
NCBI Accession
|
YP_003254629.1
|
|
Location
|
118-480 |
|
Protein Name
|
V2 |
|
Coding Region
|
ATGGCAAACATGTGGGATCCTCTAATTCATCCCTTTCCTGACACTCTGCACGGATTTCGATGTATGCTGGCAATAAAGTACTTACAATCCTTCGAGTGTAAGTATTCTCCGGATACTGTTGGGCGTGAATTTATCAGGGATCTTATTTGCATTTTGAGGTGCAAAAACTATGCCGAAGCGTTCCATAGATACAGTGTCGTCACTGCCAATGTCTATAACACGCCGGAGGCTAAATTACGGGAGTCAGTTCAGTCTCCCTGCAGCTGTCCCCACTGCCCCAGGCATGTCATACAAAAGACGTGCTTGGACAGGTCGTCCAATGTATCGGAAACCCAGATTTTACCGTGCCAGAAGGAGCAGTGA |
|
Protein Sequence
|
MANMWDPLIHPFPDTLHGFRCMLAIKYLQSFECKYSPDTVGREFIRDLICILRCKNYAEAFHRYSVVTANVYNTPEAKLRESVQSPCSCPHCPRHVIQKTCLDRSSNVSETQILPCQKEQ |
|
NCBI Accession
|
YP_003254630.1
|
|
Location
|
287-1063 |
|
Protein Name
|
V1 |
|
Coding Region
|
ATGCCGAAGCGTTCCATAGATACAGTGTCGTCACTGCCAATGTCTATAACACGCCGGAGGCTAAATTACGGGAGTCAGTTCAGTCTCCCTGCAGCTGTCCCCACTGCCCCAGGCATGTCATACAAAAGACGTGCTTGGACAGGTCGTCCAATGTATCGGAAACCCAGATTTTACCGTGCCAGAAGGAGCAGTGATGTTCCTCGTGGCTGTGAAGGACCTTGTAAGGTCCAGTCGTATGAACAGAGACATGATATCTCTCATGTCGGTAAGGTATTGTGTGTCAGTGATGTAACTAGGGGAGGTGGTATAACTCATAGGGTAGGTAAACGTTTTTGTGTTAAGTCTGTTTACATACTAGGTAAAGTGTGGATGGATGAGAATATCAAAACCAAAAACCATACGAACAACTGTACGTTCTGGTTAGTTAGGGATAGGAGGCCTTATGGCACTCCGCAAGACTTTGGTCAGGTTTTTAATATGTATGATAACGAACCAAGTACCGCTACCGTGAAGAATGACCTGCGTGATCGATTCCAAGTGCTTCATCGATTTTCAGCTATGGTTACCGGTGGTCAATATGCTAGCAAGGAGCAAGCAATCGTGAAGAAGTTCTACAAGGTGAACAACTACGTCGTCTATAATCATCAGGAAGCTGCTAAATATGAAAATCACACGGAGAATGCTTTGTTATTGTACATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACATTGAAGATACGCATATATTTCTATGACAATGTAACAAATTAA |
|
Protein Sequence
|
MPKRSIDTVSSLPMSITRRRLNYGSQFSLPAAVPTAPGMSYKRRAWTGRPMYRKPRFYRARRSSDVPRGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGGGITHRVGKRFCVKSVYILGKVWMDENIKTKNHTNNCTFWLVRDRRPYGTPQDFGQVFNMYDNEPSTATVKNDLRDRFQVLHRFSAMVTGGQYASKEQAIVKKFYKVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDNVTN |
|
NCBI Accession
|
YP_003254631.1
|
|
Location
|
1060-1470 |
|
Protein Name
|
C3 |
|
Coding Region
|
ATGGTTGTGGATTTTCGCACAGGGGAGTACATCACTGCAACTCAGGCGCAGAGTGGCGTTTATACTTGGATGGTCCCAAATCCCCTCTATTTCAAGGTGCTGAAGCACAAAACCAGATCGTTCAACAACAACTGGGACTACATAGAAATGCAGATCCAGTTCAATCACAACCTCAGGAGAGCTCTGGGGATTCACAGATGTTTTTTAATCTTCCGCATTTGGACTCGTTTACGACCTCTGACTTGGCATTTTTTAAGAGTATTTAAATATCATGTATGTAAATTTCTGAATAGTTTGGGTGTTGTATCAGTAAATAATGTTATTAGAGCAGTTAATCATGTCTTATGGAATGTAATAGAGGAGACCATGTATGTAGACATGCTTCATATAATAAAATTCAATTTATATTAA |
|
Protein Sequence
|
MVVDFRTGEYITATQAQSGVYTWMVPNPLYFKVLKHKTRSFNNNWDYIEMQIQFNHNLRRALGIHRCFLIFRIWTRLRPLTWHFLRVFKYHVCKFLNSLGVVSVNNVIRAVNHVLWNVIEETMYVDMLHIIKFNLY |
|
NCBI Accession
|
YP_003254632.1
|
|
Location
|
1205-1612 |
|
Protein Name
|
C2 |
|
Coding Region
|
ATGCAACCTTCATCTACCTCAACGAGCCATTATATACAAGTACCACAGAAAATTCAACATAAAATTGCAAAAAAGAAAATCACAAGGCGAAGACGCATTGATTTAGATTGTGGATGCTCATACTATCTCAGCCTTAACTGTCATGGTTGTGGATTTTCGCACAGGGGAGTACATCACTGCAACTCAGGCGCAGAGTGGCGTTTATACTTGGATGGTCCCAAATCCCCTCTATTTCAAGGTGCTGAAGCACAAAACCAGATCGTTCAACAACAACTGGGACTACATAGAAATGCAGATCCAGTTCAATCACAACCTCAGGAGAGCTCTGGGGATTCACAGATGTTTTTTAATCTTCCGCATTTGGACTCGTTTACGACCTCTGACTTGGCATTTTTTAAGAGTATTTAA |
|
Protein Sequence
|
MQPSSTSTSHYIQVPQKIQHKIAKKKITRRRRIDLDCGCSYYLSLNCHGCGFSHRGVHHCNSGAEWRLYLDGPKSPLFQGAEAQNQIVQQQLGLHRNADPVQSQPQESSGDSQMFFNLPHLDSFTTSDLAFFKSI |
|
NCBI Accession
|
YP_003254633.1
|
|
Location
|
1551-2600 |
|
Protein Name
|
C1 |
|
Coding Region
|
ATGCCACGTCATCCTTCTTTCTGTGTTAATGCTAAGAATATATTTCTCACATATCCCCAGTGTAGTCTGTCTAAAGAAACTGTTCTGGAGAAGACCCTAGGCATTTCATGCCCTTCCGAGAAACTCTTCGTTAGGGTTTCACAGGAAAAACACCAAGATGGGTCTCTGCACATCCATGCTTTGGTCCAATTCAAAGGTAAAGCCAAGTTTAGAAATGCAAGACATTTCGACATATCCCATCCTAATTCTAGCAGATCATTCCACCCCAATTTTCAGGGAGCAAGATCTTCGTCCGATATCAAGTCGTACATTCAGAAGGACGGCGATTACCTCGACTGGGGTTGTTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGGCAGCAAACGATGTTGTGGCAGCTGCTTTAAATGCTGCTTCCAAAGGGGAAGCTTTGAACATCATTAGAGAGAAACTTCCCAGAGACTTTCTATTTCAATTTCATAATTTAAATGCAAATCTAGATAAACTCTTTAAACCACAACAACAAATTTATGTCACTCCATTTAGTCGAGATTCATTTGATAATGTTCCTCATATATTGGAACAGTGGGCAAAAGAAAATGTTGTTGACGCCGCTGCGCGGCCATGGAGGCCCATAAGTATTGTGATTGAAGGTGCTTCTAGAACTGGTAAAACCATGTGGGCAAGATCTCTTGGTAGGCATAATTACTTGTGCGGCCATCTTGATCTTAGTCCAAAGGTGTATTGCAATGATGCTTGGTATAACGTCATTGATGACGTCGACCCGCATTACCTAAAACACTTTAAAGAGTTCATGGGGGCCCAGAGGGATTGGCAAAGCAACACAAAGTACGGAAAGCCAATTCAAATTAAAGGTGGCATTCCCACTATCTTCCTCTGCAATCCAGGCCCATCTTCTTCATATAAAGAATATCTGGAAGAAGAAAAAAATAAAGCACTAAAAGACTGGGCTACAAAAAATGCAACCTTCATCTACCTCAACGAGCCATTATATACAAGTACCACAGAAAATTCAACATAA |
|
Protein Sequence
|
MPRHPSFCVNAKNIFLTYPQCSLSKETVLEKTLGISCPSEKLFVRVSQEKHQDGSLHIHALVQFKGKAKFRNARHFDISHPNSSRSFHPNFQGARSSSDIKSYIQKDGDYLDWGCFQIDGRSARGGQQAANDVVAAALNAASKGEALNIIREKLPRDFLFQFHNLNANLDKLFKPQQQIYVTPFSRDSFDNVPHILEQWAKENVVDAAARPWRPISIVIEGASRTGKTMWARSLGRHNYLCGHLDLSPKVYCNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPSSSYKEYLEEEKNKALKDWATKNATFIYLNEPLYTSTTENST |
|
NCBI Accession
|
YP_003254634.1
|
|
Location
|
2186-2443 |
|
Protein Name
|
C4 |
|
Coding Region
|
ATGGGTCTCTGCACATCCATGCTTTGGTCCAATTCAAAGGTAAAGCCAAGTTTAGAAATGCAAGACATTTCGACATATCCCATCCTAATTCTAGCAGATCATTCCACCCCAATTTTCAGGGAGCAAGATCTTCGTCCGATATCAAGTCGTACATTCAGAAGGACGGCGATTACCTCGACTGGGGTTGTTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGGCAGCAAACGATGTTGTGGCAGCTGCTTTAA |
|
Protein Sequence
|
MGLCTSMLWSNSKVKPSLEMQDISTYPILILADHSTPIFREQDLRPISSRTFRRTAITSTGVVFRSMEDLLEEVNRQQTMLWQLL |