Tomato leaf curl Seychelles virus

Basic Information

Genus	Begomovirus
NCBI Assembly	GCF_000871445.1
Isolate	Seychelles:Mahe
Release date	2015/2/13
Submitter	Lefeuvre,P., Delatte,H., Naze,F., Dogley,W., Reynaud,B., Lett,J.M.
Host	Solanum lycopersicum
Download	Genome \|GFF3 \|PEP \|CDS

Genomic Organization

JBrowse

Genome

NC_009031

ACCGGATGGCCGCGCCCCCAAAAAAGAAAGTGGGCCCCGCGCACTAGTTTGTGTCGGCCAATGAGAGAGGTCCGTCATAGCTTAGTTATTTCATTTTGGTCTTTAAATTGCGTGGTCCCCAAGCTTCAGTCGTTGTCAGTATGTGGGACCCACTTGTAAACGAGTTCCCAGACTCTGTTCATGGTTTTCGTTGTATGCTTGCTATTAAATATTTGCAGGCCGTGGAAGAAACTTACGAGCCCAATACATTGGGCTACGATTTAATTCGTGATCTTATTTGTGTTATTAGGGCCCGTGATTATGTCGAAGCGACCCGGAGATATAATAATTTCCACACCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCTTATACCAGCCGTGTTGCTGCCCCCATTGCCCAAGGCACAAGCAGACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTATCGAATGTACAAAAGTCCTGATGTTCCTCGTGGTTGTGAAGGGCCATGTAAGGTCCAGTCGTATGAGCAGAGGGATGATGTCAAGCACACCGGTATTGTTCGTTGTGTTAGTGATGTTACGCGTGGTTCGGGTATTACCCATAGAGTTGGCAAGAGGTTTTGTATTAAGTCGATATATATCTTAGGTAAGATCTGGATGGATGACAATATCAAGAAGCAGAATCATACTAATCAGGTTATGTTTTTCCTTGTTCGTGATAGAAGGCCCTACGGCTCGGCTCCAATGGATTTTGGACAGGTGTTTAATATGTTTGATAATGAGCCCAGTACAGCTACGGTGAAGAATGATTTGAGGGACAGATATCAGGTCATGAGGAAATTTCATTCAACTGTAGTTGGTGGACCCTCTGGATCGAAGGAGCAGGCATTAGTTAAGAGGTTTTTTAGGATTAATAGCCATGTAACTTATAATCATCAGGAGGCAGCTAAGTATGAGAACCATACTGAGAATGCCTTATTATTGTATATGGCATGTACTCATGCGTCTAATCCAGTGTATGCTACTCTTAAGATACGGATCTATTTCTATGATTCGGTCAGTAATTAATAGATATTAAATTTTATTGCATGATTCTCCGTAACTTGGAGGGTATTTACAAGTACATCGTGTAATACATAATCAACTGCTCTAATTATTGCATTAATTGAAATTACACCTAAGGAATCTAAATACTTGAGAACTTGGGTCTTAAATACGGTTAAGAAACGACCAGTCTGAGGGCGTAAGCTCGTCCAGACCTTGAAGTTGAGAAAACATTTGTGAATCCCCAACGCCTTCCTCAGGTTGTGGTTGAACCTTATTTGGAATGATATGATGTCTTGGTTCGTGTTGAATGGCCGGCTGTCGTGGTCGATGATCTTGAAATAGAGGGGATTTTTTATCTCCCAGATAAACACGCCACTCTGTGCTTGAGCTGCAGTGATGAGTTCCCCGGTGCGTAATCCATGGCTGCTACAATTGATATGTATATAATATGAGCAGCCGCAGTCTAGGTCTATGCGCTTACGTCTGACTGCTCTCGTTTTCGCTATGCGGTGTTGGACCTTGATTGGTACTTGTGAAGAGTGGCTCGTGGAGGGTGATGAAGGTGGCATTCTTGAAGGCCCAGTCTTTTAGTGGTGTATTCTTTTCCTCGTCTAGATACTCTTTATACGAGGATGTTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATGGGCTTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAACTCCTTAAAGTGCTTCAGGTAGTGCGGATCAACGTCATCAATGACGTTATACCATGCATCATTGGAGTACACTTTTGGACTCAGGTCCAGATGCCCGCATAGGTAATTGTGGGGTCCTAATGACCTGGCCCACATTGTCTTGCCTGTACGACTATCACCCTCTATCACAATACTAATCGGTCTCCAAGGCCGCGCAGCGGCACCCATCACGTTTTCAGCCGCCCAGACTTCAAGTTCTTCCGGAACTTGATTGAAAGAAGAACAAAGAAAAGGAGAAATATAAGGAGCCGGAGGCTCCTGAAAAATCCTATCTAAATTACTAACTAAATTATGATACTGAAAAATAAATTTTTCAGGGAGTTTCTCCCTTATGATTTGCAAAGCAGCGTCTTTACTACCTGCATTTAAGGCATCCGCTGCCGCATCATTAGCTGTCTGCTGACCTCCTCTAGCAGATCTTCCGTCGACCTGAAAAGTACCCCAGTCGATGTAATCACCGTCCTTCTCGATGTAGGACTTGACATCTGATGAGGATTTAGCTCCCTGGAAATTTGGATGGAATTGGGAGGAGCTGGTGGGGTGTTGAAGGTCGAAATGTCTGGGGTTTTTAAATTGGGCTTTACCCTTGAACTGGATGAGAGCATGGAGGTGCAGAGACCCATCCTGGTGTTTTTCCTGGCTAACTCTGATAAATAATTTATCAGATGGGCATTTTATTGCCTTTAATAGCTCAAGAGCTATTTCTTTAGAAAGAGAGCATTTGGGATATGTAAGGAAGATATTTTTAGCTGACACTCTAAAACCTGGTTGACGAGGCATATTGGTGTCTTTCAAAACTCTACGGAATTGGTGTCTTTGGTGTCTCATTTATAGCTGGGACACCAATGGCATTTTGGTAAATTTAGCACCTTTAATTTGAATTTCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession	YP_001040014.1
Location	141-491
Gene Name	V2
Protein Name	movement protein
Coding Region	ATGTGGGACCCACTTGTAAACGAGTTCCCAGACTCTGTTCATGGTTTTCGTTGTATGCTTGCTATTAAATATTTGCAGGCCGTGGAAGAAACTTACGAGCCCAATACATTGGGCTACGATTTAATTCGTGATCTTATTTGTGTTATTAGGGCCCGTGATTATGTCGAAGCGACCCGGAGATATAATAATTTCCACACCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCTTATACCAGCCGTGTTGCTGCCCCCATTGCCCAAGGCACAAGCAGACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTATCGAATGTACAAAAGTCCTGA
Protein Sequence	MWDPLVNEFPDSVHGFRCMLAIKYLQAVEETYEPNTLGYDLIRDLICVIRARDYVEATRRYNNFHTRLEGSSKAELRQPLYQPCCCPHCPRHKQTSIMDVQAHVSKAQDVSNVQKS

NCBI Accession	YP_001040015.1
Location	301-1077
Gene Name	V1
Protein Name	coat protein
Coding Region	ATGTCGAAGCGACCCGGAGATATAATAATTTCCACACCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCTTATACCAGCCGTGTTGCTGCCCCCATTGCCCAAGGCACAAGCAGACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTATCGAATGTACAAAAGTCCTGATGTTCCTCGTGGTTGTGAAGGGCCATGTAAGGTCCAGTCGTATGAGCAGAGGGATGATGTCAAGCACACCGGTATTGTTCGTTGTGTTAGTGATGTTACGCGTGGTTCGGGTATTACCCATAGAGTTGGCAAGAGGTTTTGTATTAAGTCGATATATATCTTAGGTAAGATCTGGATGGATGACAATATCAAGAAGCAGAATCATACTAATCAGGTTATGTTTTTCCTTGTTCGTGATAGAAGGCCCTACGGCTCGGCTCCAATGGATTTTGGACAGGTGTTTAATATGTTTGATAATGAGCCCAGTACAGCTACGGTGAAGAATGATTTGAGGGACAGATATCAGGTCATGAGGAAATTTCATTCAACTGTAGTTGGTGGACCCTCTGGATCGAAGGAGCAGGCATTAGTTAAGAGGTTTTTTAGGATTAATAGCCATGTAACTTATAATCATCAGGAGGCAGCTAAGTATGAGAACCATACTGAGAATGCCTTATTATTGTATATGGCATGTACTCATGCGTCTAATCCAGTGTATGCTACTCTTAAGATACGGATCTATTTCTATGATTCGGTCAGTAATTAA
Protein Sequence	MSKRPGDIIISTPVSKVRRRLNFDSPYTSRVAAPIAQGTSRRRSWTYRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITHRVGKRFCIKSIYILGKIWMDDNIKKQNHTNQVMFFLVRDRRPYGSAPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMRKFHSTVVGGPSGSKEQALVKRFFRINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession	YP_001040016.1
Location	1534-2661
Gene Name	C1
Protein Name	replication associated protein
Coding Region	ATGAGACACCAAAGACACCAATTCCGTAGAGTTTTGAAAGACACCAATATGCCTCGTCAACCAGGTTTTAGAGTGTCAGCTAAAAATATCTTCCTTACATATCCCAAATGCTCTCTTTCTAAAGAAATAGCTCTTGAGCTATTAAAGGCAATAAAATGCCCATCTGATAAATTATTTATCAGAGTTAGCCAGGAAAAACACCAGGATGGGTCTCTGCACCTCCATGCTCTCATCCAGTTCAAGGGTAAAGCCCAATTTAAAAACCCCAGACATTTCGACCTTCAACACCCCACCAGCTCCTCCCAATTCCATCCAAATTTCCAGGGAGCTAAATCCTCATCAGATGTCAAGTCCTACATCGAGAAGGACGGTGATTACATCGACTGGGGTACTTTTCAGGTCGACGGAAGATCTGCTAGAGGAGGTCAGCAGACAGCTAATGATGCGGCAGCGGATGCCTTAAATGCAGGTAGTAAAGACGCTGCTTTGCAAATCATAAGGGAGAAACTCCCTGAAAAATTTATTTTTCAGTATCATAATTTAGTTAGTAATTTAGATAGGATTTTTCAGGAGCCTCCGGCTCCTTATATTTCTCCTTTTCTTTGTTCTTCTTTCAATCAAGTTCCGGAAGAACTTGAAGTCTGGGCGGCTGAAAACGTGATGGGTGCCGCTGCGCGGCCTTGGAGACCGATTAGTATTGTGATAGAGGGTGATAGTCGTACAGGCAAGACAATGTGGGCCAGGTCATTAGGACCCCACAATTACCTATGCGGGCATCTGGACCTGAGTCCAAAAGTGTACTCCAATGATGCATGGTATAACGTCATTGATGACGTTGATCCGCACTACCTGAAGCACTTTAAGGAGTTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACCAAGTACGGGAAGCCCATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCAACATCCTCGTATAAAGAGTATCTAGACGAGGAAAAGAATACACCACTAAAAGACTGGGCCTTCAAGAATGCCACCTTCATCACCCTCCACGAGCCACTCTTCACAAGTACCAATCAAGGTCCAACACCGCATAGCGAAAACGAGAGCAGTCAGACGTAA
Protein Sequence	MRHQRHQFRRVLKDTNMPRQPGFRVSAKNIFLTYPKCSLSKEIALELLKAIKCPSDKLFIRVSQEKHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPTSSSQFHPNFQGAKSSSDVKSYIEKDGDYIDWGTFQVDGRSARGGQQTANDAAADALNAGSKDAALQIIREKLPEKFIFQYHNLVSNLDRIFQEPPAPYISPFLCSSFNQVPEELEVWAAENVMGAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNTPLKDWAFKNATFITLHEPLFTSTNQGPTPHSENESSQT

References More References in PubMed

1	Tomato leaf curl Mahe virus: a novel tomato-infecting monopartite begomovirus from the Seychelles. Scussel S, et al. Arch Virol. 2018 Dec;163(12):3451-3453. doi: 10.1007/s00705-018-4007-3. Epub 2018 Sep 3. PMID: 30178119
2	A new silverleaf-inducing biotype Ms of Bemisia tabaci (Hemiptera: Aleyrodidae) indigenous to the islands of the south-west Indian Ocean. Delatte H, et al. Bull Entomol Res. 2005 Feb;95(1):29-35. doi: 10.1079/ber2004337. PMID: 15705212

Tomato leaf curl Mahe virus: a novel tomato-infecting monopartite begomovirus from the Seychelles.

Scussel S, et al. Arch Virol. 2018 Dec;163(12):3451-3453. doi: 10.1007/s00705-018-4007-3. Epub 2018 Sep 3.

PMID: 30178119

A new silverleaf-inducing biotype Ms of Bemisia tabaci (Hemiptera: Aleyrodidae) indigenous to the islands of the south-west Indian Ocean.

Delatte H, et al. Bull Entomol Res. 2005 Feb;95(1):29-35. doi: 10.1079/ber2004337.

PMID: 15705212