Genus | Begomovirus |
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NCBI Assembly | GCF_000871445.1 |
Isolate | Seychelles:Mahe |
Release date | 2015/2/13 |
Submitter | Lefeuvre,P., Delatte,H., Naze,F., Dogley,W., Reynaud,B., Lett,J.M. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_001040014.1 |
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Location | 141-491 |
Gene Name | V2 |
Protein Name | movement protein |
Coding Region | ATGTGGGACCCACTTGTAAACGAGTTCCCAGACTCTGTTCATGGTTTTCGTTGTATGCTTGCTATTAAATATTTGCAGGCCGTGGAAGAAACTTACGAGCCCAATACATTGGGCTACGATTTAATTCGTGATCTTATTTGTGTTATTAGGGCCCGTGATTATGTCGAAGCGACCCGGAGATATAATAATTTCCACACCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCTTATACCAGCCGTGTTGCTGCCCCCATTGCCCAAGGCACAAGCAGACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTATCGAATGTACAAAAGTCCTGA |
Protein Sequence | MWDPLVNEFPDSVHGFRCMLAIKYLQAVEETYEPNTLGYDLIRDLICVIRARDYVEATRRYNNFHTRLEGSSKAELRQPLYQPCCCPHCPRHKQTSIMDVQAHVSKAQDVSNVQKS |
NCBI Accession | YP_001040015.1 |
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Location | 301-1077 |
Gene Name | V1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGACCCGGAGATATAATAATTTCCACACCCGTCTCGAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCTTATACCAGCCGTGTTGCTGCCCCCATTGCCCAAGGCACAAGCAGACGTCGATCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTATCGAATGTACAAAAGTCCTGATGTTCCTCGTGGTTGTGAAGGGCCATGTAAGGTCCAGTCGTATGAGCAGAGGGATGATGTCAAGCACACCGGTATTGTTCGTTGTGTTAGTGATGTTACGCGTGGTTCGGGTATTACCCATAGAGTTGGCAAGAGGTTTTGTATTAAGTCGATATATATCTTAGGTAAGATCTGGATGGATGACAATATCAAGAAGCAGAATCATACTAATCAGGTTATGTTTTTCCTTGTTCGTGATAGAAGGCCCTACGGCTCGGCTCCAATGGATTTTGGACAGGTGTTTAATATGTTTGATAATGAGCCCAGTACAGCTACGGTGAAGAATGATTTGAGGGACAGATATCAGGTCATGAGGAAATTTCATTCAACTGTAGTTGGTGGACCCTCTGGATCGAAGGAGCAGGCATTAGTTAAGAGGTTTTTTAGGATTAATAGCCATGTAACTTATAATCATCAGGAGGCAGCTAAGTATGAGAACCATACTGAGAATGCCTTATTATTGTATATGGCATGTACTCATGCGTCTAATCCAGTGTATGCTACTCTTAAGATACGGATCTATTTCTATGATTCGGTCAGTAATTAA |
Protein Sequence | MSKRPGDIIISTPVSKVRRRLNFDSPYTSRVAAPIAQGTSRRRSWTYRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITHRVGKRFCIKSIYILGKIWMDDNIKKQNHTNQVMFFLVRDRRPYGSAPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMRKFHSTVVGGPSGSKEQALVKRFFRINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN |
NCBI Accession | YP_001040016.1 |
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Location | 1534-2661 |
Gene Name | C1 |
Protein Name | replication associated protein |
Coding Region | ATGAGACACCAAAGACACCAATTCCGTAGAGTTTTGAAAGACACCAATATGCCTCGTCAACCAGGTTTTAGAGTGTCAGCTAAAAATATCTTCCTTACATATCCCAAATGCTCTCTTTCTAAAGAAATAGCTCTTGAGCTATTAAAGGCAATAAAATGCCCATCTGATAAATTATTTATCAGAGTTAGCCAGGAAAAACACCAGGATGGGTCTCTGCACCTCCATGCTCTCATCCAGTTCAAGGGTAAAGCCCAATTTAAAAACCCCAGACATTTCGACCTTCAACACCCCACCAGCTCCTCCCAATTCCATCCAAATTTCCAGGGAGCTAAATCCTCATCAGATGTCAAGTCCTACATCGAGAAGGACGGTGATTACATCGACTGGGGTACTTTTCAGGTCGACGGAAGATCTGCTAGAGGAGGTCAGCAGACAGCTAATGATGCGGCAGCGGATGCCTTAAATGCAGGTAGTAAAGACGCTGCTTTGCAAATCATAAGGGAGAAACTCCCTGAAAAATTTATTTTTCAGTATCATAATTTAGTTAGTAATTTAGATAGGATTTTTCAGGAGCCTCCGGCTCCTTATATTTCTCCTTTTCTTTGTTCTTCTTTCAATCAAGTTCCGGAAGAACTTGAAGTCTGGGCGGCTGAAAACGTGATGGGTGCCGCTGCGCGGCCTTGGAGACCGATTAGTATTGTGATAGAGGGTGATAGTCGTACAGGCAAGACAATGTGGGCCAGGTCATTAGGACCCCACAATTACCTATGCGGGCATCTGGACCTGAGTCCAAAAGTGTACTCCAATGATGCATGGTATAACGTCATTGATGACGTTGATCCGCACTACCTGAAGCACTTTAAGGAGTTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACCAAGTACGGGAAGCCCATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCAACATCCTCGTATAAAGAGTATCTAGACGAGGAAAAGAATACACCACTAAAAGACTGGGCCTTCAAGAATGCCACCTTCATCACCCTCCACGAGCCACTCTTCACAAGTACCAATCAAGGTCCAACACCGCATAGCGAAAACGAGAGCAGTCAGACGTAA |
Protein Sequence | MRHQRHQFRRVLKDTNMPRQPGFRVSAKNIFLTYPKCSLSKEIALELLKAIKCPSDKLFIRVSQEKHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPTSSSQFHPNFQGAKSSSDVKSYIEKDGDYIDWGTFQVDGRSARGGQQTANDAAADALNAGSKDAALQIIREKLPEKFIFQYHNLVSNLDRIFQEPPAPYISPFLCSSFNQVPEELEVWAAENVMGAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNTPLKDWAFKNATFITLHEPLFTSTNQGPTPHSENESSQT |
1 |
Tomato leaf curl Mahé virus: a novel tomato-infecting monopartite begomovirus from the Seychelles. Scussel S, et al. Arch Virol. 2018 Dec;163(12):3451-3453. doi: 10.1007/s00705-018-4007-3. Epub 2018 Sep 3. PMID: 30178119 |
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2 |
Delatte H, et al. Bull Entomol Res. 2005 Feb;95(1):29-35. doi: 10.1079/ber2004337. PMID: 15705212 |