Genus | Begomovirus |
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NCBI Assembly | GCF_000868585.1 |
Isolate | India: Pune |
Release date | 2015/2/13 |
Submitter | Chowda Reddy,R.V., Colvin,J., Muniyappa,V. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_803218.1 |
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Location | 146-502 |
Gene Name | AV2 |
Protein Name | precoat protein |
Coding Region | ATGTGGGATCCACTATTAAATGATTTTCCTGAAACCGTACACGGGTTTAGGTGTATGCTTGCTATAAAATACTTGCATTTGATAGAAAATACGTACTCACCCGATTCATTGGGATACGATCTTATACGTGATTTAATTTCTGTTGTTAGGGCAAAAAACTATGTCCAAGCGTCCAGCAGATATGATCATTTCCGGTCCCGTCTCGAAATATCGCCGACTTCTGACCTCAATCAGCCCATACAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGGCACAAAGGGAAAGGAATGGGCCAACAGGCCCATGAATCGGAAGCCCATGTTTTACAAAATGTACAGAAGTCCGGATGTTCCTAG |
Protein Sequence | MWDPLLNDFPETVHGFRCMLAIKYLHLIENTYSPDSLGYDLIRDLISVVRAKNYVQASSRYDHFRSRLEISPTSDLNQPIQQACCCPHCPRHKGKGMGQQAHESEAHVLQNVQKSGCS |
NCBI Accession | YP_803219.1 |
---|---|
Location | 306-1076 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCCAAGCGTCCAGCAGATATGATCATTTCCGGTCCCGTCTCGAAATATCGCCGACTTCTGACCTCAATCAGCCCATACAGCAAGCGTGCTGCTGTCCGCATTGTCCGCGGCACAAAGGGAAAGGAATGGGCCAACAGGCCCATGAATCGGAAGCCCATGTTTTACAAAATGTACAGAAGTCCGGATGTTCCTAGAGGCTGTGAGGGTCCATGTAAGGTCCAGTCTTTTGAGTCCAGACACGACGTAGTGCATATAGGGAAGGTTATGTGTATTAGTGATGTTACCCGTGGTACCGGTTTAACCCATAGGGTTGGTAAGCGTTTCTGTGTTAAGTCAGTTTACGTTTTGGGTAAGATATGGATGGATGAGAATATTAAGACTAAGAATCACACTAACAGTGTCATGTTCTTCCTTGTTCGTGACCGTCGTCCTGTTGATAAGCCACAAGACTTCGGAGAGGTGTTCAATATGTTTGACAATGAGCCTAGTACGGCTACTGTGAAGAATATGCATAGAGATCGTTATCAGGTGTTAAGAAAGTGGCATGCAACGGTCACTGGGGGACAATATGCTTCAAAAGAACAGGCGTTAGTTAAGAAGTTTGTTAGGGTTAATAACTATGTTGTGTATAACCAGCAAGAGGCTGGTAAATATGAAAATCATTCTGAGAATGCTTTGATGTTGTACATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACGCTTAAGATTCGTATTTACTTCTACGATTCTGTAACCAACTGA |
Protein Sequence | MSKRPADMIISGPVSKYRRLLTSISPYSKRAAVRIVRGTKGKEWANRPMNRKPMFYKMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | YP_803220.1 |
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Location | 1079-1483 |
Gene Name | AC3 |
Protein Name | replication enhancer |
Coding Region | ATGGATTTACGCACAGGGGAACCCATTACTGCAGCTCAAGCAGAGAATGGCGTGTATATCTGGGAGATTCCAAATCCCCTATATTTCAAGATAACAAAACACCACAACCGACCATTCCTGATGAACAGAGATATCATCACCGTCCAAGTACAATTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTCCTAAGTCTACAAATCTGGACGACCTCACAGCCTCAGACTGGTCATTTTTTAAGGGTCTTTAAGACCCAAGTATTTAAGTTTTTACATAATTTAGGCATTATCAGCATTAATAATGTAAATGGAGCAGTTGATTATGTGTTATGGAATGTATTACATCACATTGTATACGTAGAACAATCATATTTAATAAAATTTAATCTTTATTAA |
Protein Sequence | MDLRTGEPITAAQAENGVYIWEIPNPLYFKITKHHNRPFLMNRDIITVQVQFNHNLRKALGIHKCFLSLQIWTTSQPQTGHFLRVFKTQVFKFLHNLGIISINNVNGAVDYVLWNVLHHIVYVEQSYLIKFNLY |
NCBI Accession | YP_803221.1 |
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Location | 1224-1628 |
Gene Name | AC2 |
Protein Name | transactivator protein |
Coding Region | ATGCGAGATTCATCACCCTCGAAGGCTCACTCTACTCAGGTTCCTATCAAAGTGCAACACAGGCTAGCCAAGAAGGGGACCAGGCGTCGACGAGTTGATCTACCCTGCGGCTGTTCATATTTCATAGCGTTAGCCTGTCACGACAATGGATTTACGCACAGGGGAACCCATTACTGCAGCTCAAGCAGAGAATGGCGTGTATATCTGGGAGATTCCAAATCCCCTATATTTCAAGATAACAAAACACCACAACCGACCATTCCTGATGAACAGAGATATCATCACCGTCCAAGTACAATTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTCCTAAGTCTACAAATCTGGACGACCTCACAGCCTCAGACTGGTCATTTTTTAAGGGTCTTTAA |
Protein Sequence | MRDSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALACHDNGFTHRGTHYCSSSREWRVYLGDSKSPIFQDNKTPQPTIPDEQRYHHRPSTIQSQPEESVGDTQMFPKSTNLDDLTASDWSFFKGL |
NCBI Accession | YP_803222.1 |
---|---|
Location | 1531-2616 |
Gene Name | AC1 |
Protein Name | replication protein |
Coding Region | ATGCCTCGAGCTGGCAGATTTAATATAAATTCTAAAAATTATTTTCTTACATACCCTAAATGTTCTCTTTCAAAAGAAGAGGCACTTTCCCAATTACAAAAACTAGAAACTCCAACTTCTAAATTATTCATTAGAGTGTGTAGAGAGCTTCATGAAAATGGGGAACCTCATATCCACGTGCTCATCCAATTTGAAGGAAAATTCCAATGCACAAATAACAGATTCTTCGACCTGGTTTCCCCAACAAGATCAGCACATTTCCATCCAAACATTCAGAGAGCTAAGAGCTCGTCAGACGTCAAGGCCTATGTGGAAAAAGACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTACGGCCCTCAATATTTTAAGGGAGAAAGCTCCCAAAGATTTTGTTTTACAATTTCATAATTTAAATTCAAATTTAGATAGGATTTTTACACCTCCAGTGGAGGTTTATATTTCTCCTTTTTCTATTTCTTCATTTGATCGAGTTCCAGAGGAACTCGAAGACTGGGCTGCCGAGAACGTTGTCAGTGCCGCTGCGCGGCCATTAAGGCCCGTAAGTATAGTGATTGAGGGTGAGAGTAGGACGGGGAAGACGATGTGGGCGAGGTCACTTGGACCACACAATTATTTGTGTGGTCATCTAGACCTTAGCCCAAAGGTCTACAATAATGATGTTTGGTATAACGTCATTGATGACGTTGATCCCCACTACCTAAAGCACTTTAAAGAATTTATGGGGGCCCAAAGAGACTGGCAATCAAATACAAAGTACGGGAAGCCAGTTCAAATAAAAGGCGGAATTCCCACTATCTTCCTATGCAATCCAGGACCCAACTCCAGTTATAAAGAGTTCCTGGACGAAGAAAAGAATTCAGCTTTAAAATTTTGGGCTTTAAAAAATGCGAGATTCATCACCCTCGAAGGCTCACTCTACTCAGGTTCCTATCAAAGTGCAACACAGGCTAGCCAAGAAGGGGACCAGGCGTCGACGAGTTGA |
Protein Sequence | MPRAGRFNINSKNYFLTYPKCSLSKEEALSQLQKLETPTSKLFIRVCRELHENGEPHIHVLIQFEGKFQCTNNRFFDLVSPTRSAHFHPNIQRAKSSSDVKAYVEKDGDFIDFGVFQIDGRSARGGQQSANDAYAEAINSGSKATALNILREKAPKDFVLQFHNLNSNLDRIFTPPVEVYISPFSISSFDRVPEELEDWAAENVVSAAARPLRPVSIVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKFWALKNARFITLEGSLYSGSYQSATQASQEGDQASTS |
NCBI Accession | YP_803223.1 |
---|---|
Location | 2166-2459 |
Gene Name | AC4 |
Protein Name | symptom expression protein |
Coding Region | ATGGGGAACCTCATATCCACGTGCTCATCCAATTTGAAGGAAAATTCCAATGCACAAATAACAGATTCTTCGACCTGGTTTCCCCAACAAGATCAGCACATTTCCATCCAAACATTCAGAGAGCTAAGAGCTCGTCAGACGTCAAGGCCTATGTGGAAAAAGACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCTACGGCCCTCAATATTTTAA |
Protein Sequence | MGNLISTCSSNLKENSNAQITDSSTWFPQQDQHISIQTFRELRARQTSRPMWKKTETSLILEFSKSMADLLEEVSNLPTTHMPRQSIQGPKLRPSIF |
1 |
Shingote PR, et al. Front Microbiol. 2022 Jun 29;13:899512. doi: 10.3389/fmicb.2022.899512. eCollection 2022. PMID: 35847087 |
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2 |
Naga KC, et al. 3 Biotech. 2021 Sep;11(9):421. doi: 10.1007/s13205-021-02966-7. Epub 2021 Aug 31. PMID: 34603921 |
3 |
Venkataravanappa V, et al. Virusdisease. 2022 Jun;33(2):194-207. doi: 10.1007/s13337-022-00772-0. Epub 2022 Jul 1. PMID: 35991698 |
4 |
Chandrashekar K, et al. J Biosci. 2020;45:36. PMID: 32098915 |