Tomato leaf curl Philippines virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000840685.1 |
| Release date |
2015/2/12 |
| Submitter |
Kon,T., Dolores,L.M., Murayama,A., Bajet,N.B., Hase,S., Takahashi,H., Ikegami,M. |
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAATATTACCGTGGGCCGCGCAAATTTTTTTTATATTTGGGCCTAATGGGCCTGTTGGATGTCGGCTGCGACCAATGGAAACGCTCCCTCATCGCTTAACAATTATGTTGTCCTCTATTTATTTCTGCTGCATCAGTTTTGAATTAAGAATGTGGGATCCTCTGGTACATCCATTTCCTGAAAGCTTACACGGCTTCAGATGTATGCTTGCCATCAAATATCTTCAGAGCTTACAGAATAAATATTCTCCGGACACTGTTGGGCATGAGTTTTTGAAAGATTTTATCTGCATATTGCGAAGTAAGAATTATGCCGAAGCGTTCAATAGATACAGTAACGTCGTTGCCAATGTCTATAACACGTCGGAGGCTCAATTACGGGAGTCAGTACAGTCTCCCTGCCTCTGTCCCCACTGTCCCAGACATGTCTTACAAGCGAAGGTCATGGACTTACAGGCCCATGTTTCGGAAGCCCAAGATATACAGAATGTATAGAAGCCGTGATGTTCCTCGTGGGTGTGAAGGCCCATGTAAGGTTCAGTCTTATGAACAGCGTCATGATATAGCCCATGTGGGTAAAGTCATATGTGTTTCTGATGTCACTCGTGGTAATGGGCTCACACATCGTGTGGGAAAGAGATTTTGTGTAAAGTCTGTGTATGTGTTGGGGAAGGTCTGGATGGATGAGAACATCAAGACTAAGAATCACACAAACACTGTCATGTTTTTTTTAGTTCGTGATAGGAGACCCTATGGGACTCCCCAGGATTTTGGTCAGGTTTTTAACATGTATGATAATGAGCCTAGTACTGCAACAGTAAAAAATGATAATAGAGATCGATACCAAGTTCTTCGTAAATTTCAAGCTACAGTGACTGGAGGTCAGTATGCAAGCAAGGAGCAAGCAATAGTCAAGAGGTTCATGAAGATTAACAACCATGTTACTTACAATCATCAAGAGACTGCGAAGTACGATAACCATACAGAGAACGCTTTACTGTTGTATATGGCATGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAAATCAGAATCTATTTCTATGATTCTGTTCAAAATTAATAAATATTGAATTTTATTATATGAGAAAATTCTACATCTATTGTTTGAATTACATTGTACATCACATGATCGACTGCCCTAATTACATTGTTTATGCTAATAACCCCTAAACTATACAAATACTTCATACACTGATATTTAAATACTCTTAAGAAATGCCAAGTCTGAGGATGTAAATGAGTCCAGATTTTGCAGATCAGAAAACATTGATGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAACTGTATTTGTACTGTTATGATATCGTGGTTTTTCAAGAACGGCATCTTGTCGTGTTGGGATATCTTGAAATAAAGGGGATTTGTTATCGTCCAGGTATATACGCCATTCTCTGCCTGAGCTGCAGTGATGGGTTCCCCTGTGCGAGAATCCATATGAAGCGCAATTAAGTCCTAGATAGTAAGAGCAGCCGCAAGGAAGATCAATTCTCCGCCTGCGTATTGGTCTCCTCTTGGCTATTTTGTGCTGGACTTTGATGGGTACCTGAGTAGAGTGGCCTCGTGAGGGTGATGAATTCTGCATTTTTTAGTGCCCAGTCTTTGAGTGGAGAATTTTTATCCTCATCCAAGTACTCTTTATACGACGATGTAGGTCCTGGATTGCATAGGAAGATTGTTGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAAACTCTTTAAAATGCTTTAGATAGTGGGGGTCGACGTCATCAATGACGTTGTACCAGGCATCATTACTGTACACCTTTGGACTAAGGTCCAGATGTCCACACAAATAATTATGTGGACCCATAGACCTAGCCCACATCGTCTTCCCCGTCCTGCTATCTCCTTCTATGACAATACTCATGGGTCTCCCATTGCGCGCAGCGGCATCCCTAACATTCTCGGAAACCCAGTCTTCAAGTTCTTTTGGAACTTGGTCGAAAGAAGAAGAAAGAAAAGGACAACGAAAAACCTCTAAAGGAGGTGCAAAGATCCTATCTAAATTGGCATTTAAATTATGAAATTGTAAAACAAAATCTTTTGGAGCTAACTCCCTAATTACATTAAGAGCCTCCGACTTACTTCCTGTGTTAATTGCTTTGGCGTAAGCATCATTGGCTGATTGTTGACCCCCTCTAGCAGATCTTCCATCGATCTGAAACTCACCCCATTCGAGGGTGTCTCCGTCCTTATCAATATATGATTTGACGTCGGAGCTTGATTTAGCTCCCTGTATGTTTGGATGGTAATGTGCTGACCTTGTTGGGGATACCAGATCGAAGAATCTCTTATTCGTGCATCTGTATTTCCCTTCGAACTGGATGAGCACATGGAGATGAGGGCTCCCATCTTCGTGCAGTTCTCTGCAGATTTTGATGAATTTTTTGTTTGTTACAGTATCTAGCGTCTTTATCTGGGCAAGGGTTTCCTCTTTTGTAAGACAGCATTTGGGATATGTAAGAAAATAATTTTTGGCATTTATTTGGAATTTTCTGGGTGGTGCCATTTGACTCAGTCAATGGGTACCAATTGAGAGGATTTCATTCTACTCAGGGTATCGGTACATTGGTACCCATATATACTTGGTTACCTAATGGCATAATTGTAATTTTTTTATGGGCTTCCAAGCGGCCCACGACTA
Gene Information
|
NCBI Accession
|
NP_871722.1
|
|
Location
|
150-494 |
|
Gene Name
|
V2 |
|
Protein Name
|
V2 protein |
|
Coding Region
|
ATGTGGGATCCTCTGGTACATCCATTTCCTGAAAGCTTACACGGCTTCAGATGTATGCTTGCCATCAAATATCTTCAGAGCTTACAGAATAAATATTCTCCGGACACTGTTGGGCATGAGTTTTTGAAAGATTTTATCTGCATATTGCGAAGTAAGAATTATGCCGAAGCGTTCAATAGATACAGTAACGTCGTTGCCAATGTCTATAACACGTCGGAGGCTCAATTACGGGAGTCAGTACAGTCTCCCTGCCTCTGTCCCCACTGTCCCAGACATGTCTTACAAGCGAAGGTCATGGACTTACAGGCCCATGTTTCGGAAGCCCAAGATATACAGAATGTATAG |
|
Protein Sequence
|
MWDPLVHPFPESLHGFRCMLAIKYLQSLQNKYSPDTVGHEFLKDFICILRSKNYAEAFNRYSNVVANVYNTSEAQLRESVQSPCLCPHCPRHVLQAKVMDLQAHVSEAQDIQNV |
|
NCBI Accession
|
NP_871723.1
|
|
Location
|
310-1086 |
|
Gene Name
|
V1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGCCGAAGCGTTCAATAGATACAGTAACGTCGTTGCCAATGTCTATAACACGTCGGAGGCTCAATTACGGGAGTCAGTACAGTCTCCCTGCCTCTGTCCCCACTGTCCCAGACATGTCTTACAAGCGAAGGTCATGGACTTACAGGCCCATGTTTCGGAAGCCCAAGATATACAGAATGTATAGAAGCCGTGATGTTCCTCGTGGGTGTGAAGGCCCATGTAAGGTTCAGTCTTATGAACAGCGTCATGATATAGCCCATGTGGGTAAAGTCATATGTGTTTCTGATGTCACTCGTGGTAATGGGCTCACACATCGTGTGGGAAAGAGATTTTGTGTAAAGTCTGTGTATGTGTTGGGGAAGGTCTGGATGGATGAGAACATCAAGACTAAGAATCACACAAACACTGTCATGTTTTTTTTAGTTCGTGATAGGAGACCCTATGGGACTCCCCAGGATTTTGGTCAGGTTTTTAACATGTATGATAATGAGCCTAGTACTGCAACAGTAAAAAATGATAATAGAGATCGATACCAAGTTCTTCGTAAATTTCAAGCTACAGTGACTGGAGGTCAGTATGCAAGCAAGGAGCAAGCAATAGTCAAGAGGTTCATGAAGATTAACAACCATGTTACTTACAATCATCAAGAGACTGCGAAGTACGATAACCATACAGAGAACGCTTTACTGTTGTATATGGCATGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAAATCAGAATCTATTTCTATGATTCTGTTCAAAATTAA |
|
Protein Sequence
|
MPKRSIDTVTSLPMSITRRRLNYGSQYSLPASVPTVPDMSYKRRSWTYRPMFRKPKIYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLTHRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQVFNMYDNEPSTATVKNDNRDRYQVLRKFQATVTGGQYASKEQAIVKRFMKINNHVTYNHQETAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
|
NCBI Accession
|
NP_871724.1
|
|
Location
|
1083-1484 |
|
Gene Name
|
C3 |
|
Protein Name
|
C3 protein |
|
Coding Region
|
ATGGATTCTCGCACAGGGGAACCCATCACTGCAGCTCAGGCAGAGAATGGCGTATATACCTGGACGATAACAAATCCCCTTTATTTCAAGATATCCCAACACGACAAGATGCCGTTCTTGAAAAACCACGATATCATAACAGTACAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACATCAATGTTTTCTGATCTGCAAAATCTGGACTCATTTACATCCTCAGACTTGGCATTTCTTAAGAGTATTTAAATATCAGTGTATGAAGTATTTGTATAGTTTAGGGGTTATTAGCATAAACAATGTAATTAGGGCAGTCGATCATGTGATGTACAATGTAATTCAAACAATAGATGTAGAATTTTCTCATATAATAAAATTCAATATTTATTAA |
|
Protein Sequence
|
MDSRTGEPITAAQAENGVYTWTITNPLYFKISQHDKMPFLKNHDIITVQIQFNHNLRKALGIHQCFLICKIWTHLHPQTWHFLRVFKYQCMKYLYSLGVISINNVIRAVDHVMYNVIQTIDVEFSHIIKFNIY |
|
NCBI Accession
|
NP_871725.1
|
|
Location
|
1225-1632 |
|
Gene Name
|
C2 |
|
Protein Name
|
C2 protein |
|
Coding Region
|
ATGCAGAATTCATCACCCTCACGAGGCCACTCTACTCAGGTACCCATCAAAGTCCAGCACAAAATAGCCAAGAGGAGACCAATACGCAGGCGGAGAATTGATCTTCCTTGCGGCTGCTCTTACTATCTAGGACTTAATTGCGCTTCATATGGATTCTCGCACAGGGGAACCCATCACTGCAGCTCAGGCAGAGAATGGCGTATATACCTGGACGATAACAAATCCCCTTTATTTCAAGATATCCCAACACGACAAGATGCCGTTCTTGAAAAACCACGATATCATAACAGTACAAATACAGTTCAACCACAACCTGAGGAAAGCGTTGGGAATACATCAATGTTTTCTGATCTGCAAAATCTGGACTCATTTACATCCTCAGACTTGGCATTTCTTAAGAGTATTTAA |
|
Protein Sequence
|
MQNSSPSRGHSTQVPIKVQHKIAKRRPIRRRRIDLPCGCSYYLGLNCASYGFSHRGTHHCSSGREWRIYLDDNKSPLFQDIPTRQDAVLEKPRYHNSTNTVQPQPEESVGNTSMFSDLQNLDSFTSSDLAFLKSI |
|
NCBI Accession
|
NP_871726.1
|
|
Location
|
1532-2620 |
|
Gene Name
|
C1 |
|
Protein Name
|
Replication-associated protein |
|
Coding Region
|
ATGGCACCACCCAGAAAATTCCAAATAAATGCCAAAAATTATTTTCTTACATATCCCAAATGCTGTCTTACAAAAGAGGAAACCCTTGCCCAGATAAAGACGCTAGATACTGTAACAAACAAAAAATTCATCAAAATCTGCAGAGAACTGCACGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAAGGGAAATACAGATGCACGAATAAGAGATTCTTCGATCTGGTATCCCCAACAAGGTCAGCACATTACCATCCAAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAATCATATATTGATAAGGACGGAGACACCCTCGAATGGGGTGAGTTTCAGATCGATGGAAGATCTGCTAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCAAAGCAATTAACACAGGAAGTAAGTCGGAGGCTCTTAATGTAATTAGGGAGTTAGCTCCAAAAGATTTTGTTTTACAATTTCATAATTTAAATGCCAATTTAGATAGGATCTTTGCACCTCCTTTAGAGGTTTTTCGTTGTCCTTTTCTTTCTTCTTCTTTCGACCAAGTTCCAAAAGAACTTGAAGACTGGGTTTCCGAGAATGTTAGGGATGCCGCTGCGCGCAATGGGAGACCCATGAGTATTGTCATAGAAGGAGATAGCAGGACGGGGAAGACGATGTGGGCTAGGTCTATGGGTCCACATAATTATTTGTGTGGACATCTGGACCTTAGTCCAAAGGTGTACAGTAATGATGCCTGGTACAACGTCATTGATGACGTCGACCCCCACTATCTAAAGCATTTTAAAGAGTTTATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGGAAACCAATTCAAATTAAAGGTGGGATCCCAACAATCTTCCTATGCAATCCAGGACCTACATCGTCGTATAAAGAGTACTTGGATGAGGATAAAAATTCTCCACTCAAAGACTGGGCACTAAAAAATGCAGAATTCATCACCCTCACGAGGCCACTCTACTCAGGTACCCATCAAAGTCCAGCACAAAATAGCCAAGAGGAGACCAATACGCAGGCGGAGAATTGA |
|
Protein Sequence
|
MAPPRKFQINAKNYFLTYPKCCLTKEETLAQIKTLDTVTNKKFIKICRELHEDGSPHLHVLIQFEGKYRCTNKRFFDLVSPTRSAHYHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQSANDAYAKAINTGSKSEALNVIRELAPKDFVLQFHNLNANLDRIFAPPLEVFRCPFLSSSFDQVPKELEDWVSENVRDAAARNGRPMSIVIEGDSRTGKTMWARSMGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSPLKDWALKNAEFITLTRPLYSGTHQSPAQNSQEETNTQAEN |
|
NCBI Accession
|
NP_871727.1
|
|
Location
|
2173-2463 |
|
Gene Name
|
C4 |
|
Protein Name
|
C4 protein |
|
Coding Region
|
ATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAAGGGAAATACAGATGCACGAATAAGAGATTCTTCGATCTGGTATCCCCAACAAGGTCAGCACATTACCATCCAAACATACAGGGAGCTAAATCAAGCTCCGACGTCAAATCATATATTGATAAGGACGGAGACACCCTCGAATGGGGTGAGTTTCAGATCGATGGAAGATCTGCTAGAGGGGGTCAACAATCAGCCAATGATGCTTACGCCAAAGCAATTAACACAGGAAGTAAGTCGGAGGCTCTTAATGTAA |
|
Protein Sequence
|
MGALISMCSSSSKGNTDARIRDSSIWYPQQGQHITIQTYRELNQAPTSNHILIRTETPSNGVSFRSMEDLLEGVNNQPMMLTPKQLTQEVSRRLLM |